RNA–Protein interactions for RNA: ENST00000531695.1

CHD7-210, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-210ENST00000531695 MRPL35Q9NZE8 188 aaKnown RBP4.35□□□□□ -1.71
CHD7-210ENST00000531695 KIF25-AS1Q9Y6Z4 181 aa4.35□□□□□ -1.71
CHD7-210ENST00000531695 DMXL1Q9Y485 3027 aa4.35□□□□□ -1.71
CHD7-210ENST00000531695 MUC4Q99102 2169 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 SPTBN1Q01082 2364 aaKnown RBP4.34□□□□□ -1.71
CHD7-210ENST00000531695 IGHV3-49A0A0A0MS15 119 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 IGHV4-61A0A0C4DH41 118 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 TRBV6-5A0A0K0K1A5 114 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 TMEM89A2RUT3 159 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 TMEM8BA6NDV4 472 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 E9PLD3 99 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 H3BUT2 72 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 ZNF207O43670 478 aaKnown RBP4.34□□□□□ -1.71
CHD7-210ENST00000531695 FSHBP01225 129 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 SMIM13P0DJ93 91 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 RNASE3P12724 160 aaKnown RBP4.34□□□□□ -1.71
CHD7-210ENST00000531695 UQCRFS1P47985 274 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 LINC00315P59091 139 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 SPANXN1Q5VSR9 72 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 Q6ZQT7 251 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 GTSCR1Q86UQ5 136 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 CEND1Q8N111 149 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 NEXN-AS1Q8NBZ9 246 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 OR10J6PQ8NGY7 276 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 PIMREGQ9BSJ6 248 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 UFC1Q9Y3C8 167 aa4.34□□□□□ -1.71
CHD7-210ENST00000531695 MED13LQ71F56 2210 aa4.34□□□□□ -1.72
CHD7-210ENST00000531695 IGF2RP11717 2491 aa4.34□□□□□ -1.72
CHD7-210ENST00000531695 AGRNO00468 2067 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 IGHV3OR16-13A0A075B7E8 117 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 IGHV3-74A0A0B4J1X5 117 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 TRAV26-2A0A0B4J265 109 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 TRAV40A0A0B4J280 105 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.33□□□□□ -1.72
CHD7-210ENST00000531695 TRBV12-3P01733 135 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 FABP2P12104 132 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 RIPPLY3P57055 190 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 ANXA2RQ3ZCQ2 193 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 TMEM219Q86XT9 240 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 MAPKAPK5-AS1Q8N8E1 139 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 SPCS1Q9Y6A9 102 aa4.33□□□□□ -1.72
CHD7-210ENST00000531695 ATRXP46100 2492 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 NBASA2RRP1 2371 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 G3V4G9 280 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 IGHV4-38-2P0DP08 117 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 COX6B1P14854 86 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 GCSHP23434 173 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 POLR2KP53803 58 aaKnown RBP4.32□□□□□ -1.72
CHD7-210ENST00000531695 DCANP1Q8TF63 244 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 BAALCQ8WXS3 180 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 C9orf85Q96MD7 179 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 TTTY13Q9BZ97 58 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 TMEM160Q9NX00 188 aa4.32□□□□□ -1.72
CHD7-210ENST00000531695 CHTOPQ9Y3Y2 248 aaKnown RBP4.32□□□□□ -1.72
CHD7-210ENST00000531695 MYMXA0A1B0GTQ4 84 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 IGIPA6NJ69 53 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 OR11H12B2RN74 326 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 IGLL5B9A064 214 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 H3BUX3 64 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 LGALS9O00182 355 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 GATA3P23771 443 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 S100A4P26447 101 aaKnown RBP4.31□□□□□ -1.72
CHD7-210ENST00000531695 C12orf74Q32Q52 190 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 PAPPA-AS1Q5QFB9 102 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 C2orf66Q6UXQ4 117 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 OR11H1Q8NG94 326 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 OR11H2Q8NH07 326 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 RPL39LQ96EH5 51 aaKnown RBP4.31□□□□□ -1.72
CHD7-210ENST00000531695 TMEM141Q96I45 108 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 SCGB3A1Q96QR1 104 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 TIMM17AQ99595 171 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 RHPN1-AS1Q9BWJ2 59 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 KLK15Q9H2R5 256 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 EDA2RQ9HAV5 297 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 DAZ1Q9NQZ3 744 aaKnown RBP4.31□□□□□ -1.72
CHD7-210ENST00000531695 PHLDA3Q9Y5J5 127 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 COL6A6A6NMZ7 2263 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 ZZEF1O43149 2961 aa4.31□□□□□ -1.72
CHD7-210ENST00000531695 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.3□□□□□ -1.721e-9■■■■■ 27.3
CHD7-210ENST00000531695 IGLV4-69A0A075B6H9 119 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 PRSS29PA6NIE9 313 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 A8MTW9 85 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 SAP30O75446 220 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 CRYGDP07320 174 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 MSMBP08118 114 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 LGALS1P09382 135 aaKnown RBP4.3□□□□□ -1.72
CHD7-210ENST00000531695 PF4V1P10720 104 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 GNLYP22749 145 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 PSMB8P28062 276 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 RNASE4P34096 147 aaKnown RBP4.3□□□□□ -1.72
CHD7-210ENST00000531695 ID1P41134 155 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 DSCR9P59020 149 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 COTL1Q14019 142 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 LY6DQ14210 128 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 RHOHQ15669 191 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 RNF151Q2KHN1 245 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 RRN3P1Q2M238 152 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 CLEC2AQ6UVW9 174 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 BRD3OSQ6XYD6 125 aa4.3□□□□□ -1.72
CHD7-210ENST00000531695 FOXI2Q6ZQN5 318 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms