RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 M0R381 172 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 IGLC6P0CF74 106 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 SPART-AS1P0CW21 52 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 DEFB130BP0DP73 79 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 DEFB130AP0DP74 79 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 DAZ2Q13117 558 aaKnown RBP12.62□□□□□ -0.39
CTSB-222ENST00000531551 LYZL1Q6UWQ5 148 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 Q6ZTI0 123 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 IL17DQ8TAD2 202 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 PGLYRP4Q96LB8 373 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 DKK2Q9UBU2 259 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 TENM3Q9P273 2699 aa12.62□□□□□ -0.39
CTSB-222ENST00000531551 A0A1W2PPQ1 181 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 GAGE12BA1L429 117 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 HIGD1CA8MV81 97 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 M0R2P5 195 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 GAGE7O76087 117 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 GAGE12FP0CL80 117 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 GAGE12GP0CL81 117 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 GAGE12IP0CL82 117 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 RHEBQ15382 184 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 ZNF876PQ49A33 203 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 SPANXN1Q5VSR9 72 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 OR10AG1Q8NH19 301 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 COL7A1Q02388 2944 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 CXorf65A6NEN9 183 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 SPINK4O60575 86 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 MED14OSP0DP75 135 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 CTDSP1Q9GZU7 261 aa12.61□□□□□ -0.39
CTSB-222ENST00000531551 LYRM9A8MSI8 78 aa12.6□□□□□ -0.39
CTSB-222ENST00000531551 SNAI2O43623 268 aa12.6□□□□□ -0.39
CTSB-222ENST00000531551 OR5AL1P0C617 328 aa12.6□□□□□ -0.39
CTSB-222ENST00000531551 SSBP4Q9BWG4 385 aaPredicted RBP12.6□□□□□ -0.39
CTSB-222ENST00000531551 GFRA4Q9GZZ7 299 aa12.6□□□□□ -0.39
CTSB-222ENST00000531551 SCRT2Q9NQ03 307 aa12.6□□□□□ -0.39
CTSB-222ENST00000531551 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 SYT8Q8NBV8 401 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 NAT8BQ9UHF3 227 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 TRGV2A0A075B6R0 118 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 SMIM27A0A1W2PRY6 76 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 F2Z2F3 143 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 ATP6V1G1O75348 118 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 ATRAIDQ6UW56 229 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 ZFP82Q8N141 532 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 NUP35Q8NFH5 326 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 C11orf45Q8TAV5 145 aa12.59□□□□□ -0.39
CTSB-222ENST00000531551 FAM231BA6NCW3 169 aa12.58□□□□□ -0.4
CTSB-222ENST00000531551 FAM3BP58499 235 aaPredicted RBP12.58□□□□□ -0.4
CTSB-222ENST00000531551 DAD1P61803 113 aa12.58□□□□□ -0.4
CTSB-222ENST00000531551 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.4
CTSB-222ENST00000531551 BORCS7Q96B45 105 aa12.58□□□□□ -0.4
CTSB-222ENST00000531551 CTRLP40313 264 aa12.57□□□□□ -0.4
CTSB-222ENST00000531551 FOXA3P55318 350 aaPredicted RBP12.57□□□□□ -0.4
CTSB-222ENST00000531551 RASL10AQ92737 203 aa12.57□□□□□ -0.4
CTSB-222ENST00000531551 A0A087WWC5 75 aa12.57□□□□□ -0.4
CTSB-222ENST00000531551 TEX48A0A1B0GUV7 120 aa12.57□□□□□ -0.4
CTSB-222ENST00000531551 NANOS2P60321 138 aaKnown RBP12.57□□□□□ -0.4
CTSB-222ENST00000531551 TWIST1Q15672 202 aa12.57□□□□□ -0.4
CTSB-222ENST00000531551 NTF3P20783 257 aa12.56□□□□□ -0.4
CTSB-222ENST00000531551 CACNG7P62955 275 aa12.56□□□□□ -0.4
CTSB-222ENST00000531551 URGCP-MRPS24S4R325 110 aa12.56□□□□□ -0.4
CTSB-222ENST00000531551 IGHV3-53P01767 116 aa12.55□□□□□ -0.4
CTSB-222ENST00000531551 C12orf74Q32Q52 190 aa12.55□□□□□ -0.4
CTSB-222ENST00000531551 JPT2Q9H910 190 aa12.55□□□□□ -0.4
CTSB-222ENST00000531551 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
CTSB-222ENST00000531551 MSRB1Q9NZV6 116 aa12.55□□□□□ -0.4
CTSB-222ENST00000531551 KCNIP4Q6PIL6 250 aa12.55□□□□□ -0.4
CTSB-222ENST00000531551 TMEM242Q9NWH2 141 aa12.55□□□□□ -0.4
CTSB-222ENST00000531551 A0A1B0GUT8 65 aa12.54□□□□□ -0.4
CTSB-222ENST00000531551 S100PP25815 95 aa12.54□□□□□ -0.4
CTSB-222ENST00000531551 HTN3P15516 51 aa12.53□□□□□ -0.4
CTSB-222ENST00000531551 MRPL54Q6P161 138 aaKnown RBP12.53□□□□□ -0.4
CTSB-222ENST00000531551 Q6ZTC4 211 aa12.53□□□□□ -0.4
CTSB-222ENST00000531551 LINC00612Q8N6U2 182 aa12.53□□□□□ -0.4
CTSB-222ENST00000531551 OR4C5Q8NGB2 326 aa12.53□□□□□ -0.4
CTSB-222ENST00000531551 PTH2Q96A98 100 aa12.53□□□□□ -0.4
CTSB-222ENST00000531551 FAM74A4Q5TZK3 123 aa12.53□□□□□ -0.4
CTSB-222ENST00000531551 IMMP2LQ96T52 175 aa12.53□□□□□ -0.4
CTSB-222ENST00000531551 A0A087WWL8 130 aa12.52□□□□□ -0.41
CTSB-222ENST00000531551 IGHV3-73A0A0B4J1V6 119 aa12.52□□□□□ -0.41
CTSB-222ENST00000531551 NXPH4O95158 308 aa12.52□□□□□ -0.41
CTSB-222ENST00000531551 S100A1P23297 94 aa12.52□□□□□ -0.41
CTSB-222ENST00000531551 RIGQ13278 110 aa12.52□□□□□ -0.41
CTSB-222ENST00000531551 CNFNQ9BYD5 112 aa12.52□□□□□ -0.41
CTSB-222ENST00000531551 MUC4Q99102 2169 aa12.52□□□□□ -0.41
CTSB-222ENST00000531551 A8MWV9 139 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 CAMPP49913 170 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 CFAP126Q5VTH2 177 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 WDR73Q6P4I2 378 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 C14orf178Q8N769 122 aaPredicted RBP12.51□□□□□ -0.41
CTSB-222ENST00000531551 ZNF479Q96JC4 524 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 AP1S3Q96PC3 154 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 SAMD10Q9BYL1 202 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 IGHV4-4A0A075B6R2 117 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 SMIM17P0DL12 118 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 PIK3CD-AS1Q5SR53 167 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 TMEM88Q6PEY1 159 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 POM121L12Q8N7R1 296 aa12.51□□□□□ -0.41
CTSB-222ENST00000531551 NDUFAF3Q9BU61 184 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms