RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 KRTAP19-8Q3LI54 63 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 PPP1R1CQ8WVI7 109 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 CARD19Q96LW7 228 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 SMIM7Q9BQ49 75 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 ATG5Q9H1Y0 275 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 MED11Q9P086 117 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 COMMD3Q9UBI1 195 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 STOML2Q9UJZ1 356 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 FAM135BQ49AJ0 1406 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 USP9XQ93008 2570 aaPredicted RBP-0.33□□□□□ -2.46
NUP98-218ENST00000530516 DOCK11Q5JSL3 2073 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 CPDO75976 1380 aa-0.33□□□□□ -2.46
NUP98-218ENST00000530516 COL6A3P12111 3177 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 NIPBLQ6KC79 2804 aaeCLIP-0.34□□□□□ -2.46
NUP98-218ENST00000530516 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.34□□□□□ -2.46
NUP98-218ENST00000530516 TRBV27A0A0K0K1C4 114 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 E2F6O75461 281 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 APOBP04114 4563 aaKnown RBP-0.34□□□□□ -2.46
NUP98-218ENST00000530516 PTPRGP23470 1445 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 GTF2A1P52655 376 aaPredicted RBP-0.34□□□□□ -2.46
NUP98-218ENST00000530516 LSM3P62310 102 aaKnown RBP-0.34□□□□□ -2.46
NUP98-218ENST00000530516 SMIM20Q8N5G0 67 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 FAM24BQ8N5W8 94 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 MORN4Q8NDC4 146 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 BPESC1Q9GZL8 116 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 COA4Q9NYJ1 87 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 LAMTOR2Q9Y2Q5 125 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 XIRP1Q702N8 1843 aaKnown RBP-0.34□□□□□ -2.46
NUP98-218ENST00000530516 SACSQ9NZJ4 4579 aa-0.34□□□□□ -2.46
NUP98-218ENST00000530516 CSMD3Q7Z407 3707 aa-0.35□□□□□ -2.46
NUP98-218ENST00000530516 CHD8Q9HCK8 2581 aa-0.35□□□□□ -2.46
NUP98-218ENST00000530516 MXRA5Q9NR99 2828 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 VPS13BQ7Z7G8 4022 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 CELSR3Q9NYQ7 3312 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 TRAV12-2A0A075B6T6 113 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 TRBV7-6A0A0J9YX20 115 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 TEX49A0A1B0GTD5 131 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 CDC42EP2O14613 210 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 IGKCP01834 107 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 IFITM1P13164 125 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 IL7P13232 177 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 TAS2R41P59536 307 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 UNQ5815/PRO19632Q6UWF5 114 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 LINC00305Q7Z4B0 112 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 STX19Q8N4C7 294 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 OR51A4Q8NGJ6 313 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 NAT14Q8WUY8 206 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 DYDC1Q8WWB3 177 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 FKBP11Q9NYL4 201 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 PRRC2CQ9Y520 2896 aaKnown RBP-0.35□□□□□ -2.47
NUP98-218ENST00000530516 DNAH9Q9NYC9 4486 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 DNAH17Q9UFH2 4485 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 AKAP9Q99996 3911 aa-0.35□□□□□ -2.47
NUP98-218ENST00000530516 PHIPQ8WWQ0 1821 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 MYO18BQ8IUG5 2567 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 TRAV13-1A0A0B4J241 112 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 TRBV10-1A0A0K0K1A3 114 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 C9JAW5 83 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 H7BYZ3 331 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 IFNA21P01568 189 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 APOC1P02654 83 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 CCKP06307 115 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 PYYP10082 97 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 SERPINB1P30740 379 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 S100A11P31949 105 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 IQCJQ1A5X6 159 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 OR5A2Q8NGI9 324 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 LXNQ9BS40 222 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 UFC1Q9Y3C8 167 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 PTPN13Q12923 2485 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 AKAP13Q12802 2813 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 ROCK1Q13464 1354 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.36□□□□□ -2.47
NUP98-218ENST00000530516 LYSTQ99698 3801 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 FASNP49327 2511 aaKnown RBP-0.36□□□□□ -2.47
NUP98-218ENST00000530516 FLNBO75369 2602 aaKnown RBP-0.36□□□□□ -2.47
NUP98-218ENST00000530516 KDM5CP41229 1560 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 CHD6Q8TD26 2715 aa-0.36□□□□□ -2.47
NUP98-218ENST00000530516 PNMA8CA0A1B0GUJ8 204 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 PFDN1O60925 122 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 FAM107AO95990 144 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 SLC25A4P12235 298 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 ADCYAP1P18509 176 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 POLR2JP52435 117 aaKnown RBP-0.37□□□□□ -2.47
NUP98-218ENST00000530516 TEX29Q8N6K0 151 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 OR4S1Q8NGB4 309 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 TMEM141Q96I45 108 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 BET1LQ9NYM9 111 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 SVEP1Q4LDE5 3571 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 A2MP01023 1474 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 TEX15Q9BXT5 2789 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 PIEZO2Q9H5I5 2752 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 APC2O95996 2303 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 CASZ1Q86V15 1759 aa-0.37□□□□□ -2.47
NUP98-218ENST00000530516 BIVM-ERCC5R4GMW8 1640 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 TNRC18O15417 2968 aaPredicted RBP-0.38□□□□□ -2.47
NUP98-218ENST00000530516 ARFGEF1Q9Y6D6 1849 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 CUBNO60494 3623 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 MAP1LC3B2A6NCE7 125 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 PPP5D1E7EU14 171 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms