RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 RBMY1CP0DJD4 496 aa10.54□□□□□ -0.72
TTC39A-216ENST00000530004 RBMY1FQ15415 496 aaKnown RBP10.54□□□□□ -0.72
TTC39A-216ENST00000530004 TDRG1Q3Y452 100 aa10.54□□□□□ -0.72
TTC39A-216ENST00000530004 ZNF493Q6ZR52 646 aa10.54□□□□□ -0.72
TTC39A-216ENST00000530004 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
TTC39A-216ENST00000530004 MSRB1Q9NZV6 116 aa10.54□□□□□ -0.72
TTC39A-216ENST00000530004 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
TTC39A-216ENST00000530004 RNASE3P12724 160 aaKnown RBP10.54□□□□□ -0.72
TTC39A-216ENST00000530004 SRIP30626 198 aa10.54□□□□□ -0.72
TTC39A-216ENST00000530004 DNLZQ5SXM8 178 aa10.54□□□□□ -0.72
TTC39A-216ENST00000530004 SPANXN1Q5VSR9 72 aa10.54□□□□□ -0.72
TTC39A-216ENST00000530004 NOTCH1P46531 2555 aa10.53□□□□□ -0.72
TTC39A-216ENST00000530004 UBE2CO00762 179 aa10.53□□□□□ -0.72
TTC39A-216ENST00000530004 CACNG7P62955 275 aa10.53□□□□□ -0.72
TTC39A-216ENST00000530004 TP53TG3Q9ULZ0 132 aa10.53□□□□□ -0.72
TTC39A-216ENST00000530004 LOC102724200A0A096LPH7 203 aaPredicted RBP10.52□□□□□ -0.72
TTC39A-216ENST00000530004 SPRY2O43597 315 aa10.52□□□□□ -0.72
TTC39A-216ENST00000530004 HOXA5P20719 270 aa10.52□□□□□ -0.72
TTC39A-216ENST00000530004 SCRT2Q9NQ03 307 aa10.52□□□□□ -0.72
TTC39A-216ENST00000530004 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.72
TTC39A-216ENST00000530004 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.73
TTC39A-216ENST00000530004 INSP01308 110 aa10.52□□□□□ -0.73
TTC39A-216ENST00000530004 AMBPP02760 352 aa10.52□□□□□ -0.73
TTC39A-216ENST00000530004 IGHV4-30-4P0DP06 118 aa10.52□□□□□ -0.73
TTC39A-216ENST00000530004 NUTF2P61970 127 aaKnown RBP10.52□□□□□ -0.73
TTC39A-216ENST00000530004 COA6Q5JTJ3 125 aaKnown RBP10.52□□□□□ -0.73
TTC39A-216ENST00000530004 AMN1Q8IY45 258 aa10.52□□□□□ -0.73
TTC39A-216ENST00000530004 ALKBH7Q9BT30 221 aaPredicted RBP10.52□□□□□ -0.73
TTC39A-216ENST00000530004 TMEM191AQ9H0A3 160 aa10.52□□□□□ -0.73
TTC39A-216ENST00000530004 XCL2Q9UBD3 114 aa10.52□□□□□ -0.73
TTC39A-216ENST00000530004 IGHV3-16A0A0C4DH30 117 aa10.51□□□□□ -0.73
TTC39A-216ENST00000530004 K7EIL1 84 aa10.51□□□□□ -0.73
TTC39A-216ENST00000530004 M0R381 172 aa10.51□□□□□ -0.73
TTC39A-216ENST00000530004 FAM104BQ5XKR9 115 aa10.51□□□□□ -0.73
TTC39A-216ENST00000530004 CBY3A6NI87 242 aa10.5□□□□□ -0.73
TTC39A-216ENST00000530004 Q0VG73 95 aa10.5□□□□□ -0.73
TTC39A-216ENST00000530004 PDZD11Q5EBL8 140 aa10.5□□□□□ -0.73
TTC39A-216ENST00000530004 C20orf144Q9BQM9 153 aa10.5□□□□□ -0.73
TTC39A-216ENST00000530004 NBEAL1Q6ZS30 2694 aa10.5□□□□□ -0.73
TTC39A-216ENST00000530004 TRGV11A0A075B6L2 103 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 A8MZ25 164 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 HTN1P15515 57 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 RPL35AP18077 110 aaKnown RBP10.49□□□□□ -0.73
TTC39A-216ENST00000530004 OR10J3Q5JRS4 329 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 SMIM15Q7Z3B0 74 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 BAGE3Q86Y29 109 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 MDFICQ9P1T7 246 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 EVI2AP22794 236 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 HIST3H2BBQ8N257 126 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 C18orf32Q8TCD1 76 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 LINC01587Q99440 93 aa10.49□□□□□ -0.73
TTC39A-216ENST00000530004 MRPL51Q4U2R6 128 aaKnown RBP10.48□□□□□ -0.73
TTC39A-216ENST00000530004 TMEM256Q8N2U0 113 aa10.48□□□□□ -0.73
TTC39A-216ENST00000530004 C9orf85Q96MD7 179 aa10.48□□□□□ -0.73
TTC39A-216ENST00000530004 NXPH4O95158 308 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 IQCJQ1A5X6 159 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 RNF185Q96GF1 192 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 IFITM10A6NMD0 228 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 D6R8Y8 96 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 PRM2P04554 102 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 GIG44P09565 113 aaPredicted RBP10.47□□□□□ -0.73
TTC39A-216ENST00000530004 RAB4AP20338 218 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 S100A2P29034 98 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 LINC00310P59036 64 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 DEFA6Q01524 100 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 TMEM208Q9BTX3 173 aa10.47□□□□□ -0.73
TTC39A-216ENST00000530004 NUPR1O60356 82 aa10.46□□□□□ -0.74
TTC39A-216ENST00000530004 SERF1AO75920 110 aa10.46□□□□□ -0.74
TTC39A-216ENST00000530004 AKR1D1P51857 326 aa10.46□□□□□ -0.74
TTC39A-216ENST00000530004 DEFB121Q5J5C9 76 aa10.46□□□□□ -0.74
TTC39A-216ENST00000530004 MORN3Q6PF18 240 aaPredicted RBP10.46□□□□□ -0.74
TTC39A-216ENST00000530004 C1orf158Q8N1D5 194 aa10.46□□□□□ -0.74
TTC39A-216ENST00000530004 RCHY1Q96PM5 261 aa10.46□□□□□ -0.74
TTC39A-216ENST00000530004 IGHV3OR16-12A0A075B7B8 117 aa10.45□□□□□ -0.74
TTC39A-216ENST00000530004 SMKR1H3BMG3 65 aa10.45□□□□□ -0.74
TTC39A-216ENST00000530004 CKS2P33552 79 aa10.45□□□□□ -0.74
TTC39A-216ENST00000530004 ORMDL3Q8N138 153 aa10.45□□□□□ -0.74
TTC39A-216ENST00000530004 MRAPQ8TCY5 172 aa10.45□□□□□ -0.74
TTC39A-216ENST00000530004 AP1S3Q96PC3 154 aa10.45□□□□□ -0.74
TTC39A-216ENST00000530004 U3KQK5 164 aa10.45□□□□□ -0.74
TTC39A-216ENST00000530004 NCR2O95944 276 aa10.44□□□□□ -0.74
TTC39A-216ENST00000530004 C14orf178Q8N769 122 aaPredicted RBP10.44□□□□□ -0.74
TTC39A-216ENST00000530004 C1QTNF4Q9BXJ3 329 aa10.44□□□□□ -0.74
TTC39A-216ENST00000530004 ZNF415Q09FC8 603 aa10.44□□□□□ -0.74
TTC39A-216ENST00000530004 SYT8Q8NBV8 401 aa10.44□□□□□ -0.74
TTC39A-216ENST00000530004 PRELID3AQ96N28 172 aa10.44□□□□□ -0.74
TTC39A-216ENST00000530004 KIR2DL5BA0A0G2JN68 375 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 KIR2DL5BA0A0G2JPC4 375 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 ESDP10768 282 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 FABP4P15090 132 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 KIR2DL5AQ8N109 375 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 KIR2DL5BQ8NHK3 375 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 HIST1H2BLQ99880 126 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 CSTL1Q9H114 145 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 DPH3P1Q9H4G8 78 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 GSN-AS1Q9NRJ2 163 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 GOLT1BQ9Y3E0 138 aa10.43□□□□□ -0.74
TTC39A-216ENST00000530004 DNAH3Q8TD57 4116 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms