RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 MSMBP08118 114 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 RIPPLY3P57055 190 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 PAPPA-AS1Q5QFB9 102 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 CLEC2AQ6UVW9 174 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 FOXI2Q6ZQN5 318 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 LCNL1Q6ZST4 164 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 OR11H1Q8NG94 326 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 OR11H2Q8NH07 326 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 DCANP1Q8TF63 244 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 C9orf85Q96MD7 179 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 CCL19Q99731 98 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 CSTL1Q9H114 145 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 PIEZO2Q9H5I5 2752 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 IGHV4-30-2A0A087WSY4 118 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 K7ERJ3 54 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 LGALS9O00182 355 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 TSHBP01222 138 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 MGPP08493 103 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 LGALS1P09382 135 aaKnown RBP6.26□□□□□ -1.41
CSTF3-208ENST00000528865 COX6B1P14854 86 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 GATA3P23771 443 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 PSMB8P28062 276 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 RRN3P1Q2M238 152 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
CSTF3-208ENST00000528865 TMEM141Q96I45 108 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 NHP2Q9NX24 153 aaKnown RBP6.26□□□□□ -1.41
CSTF3-208ENST00000528865 CYSLTR1Q9Y271 337 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 ASPMQ8IZT6 3477 aa6.26□□□□□ -1.41
CSTF3-208ENST00000528865 IGHV3-16A0A0C4DH30 117 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 B4DSR2 109 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 F8W1H4 67 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 AVPP01185 164 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 DSCR9P59020 149 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 RPL11P62913 178 aaKnown RBP6.25□□□□□ -1.41
CSTF3-208ENST00000528865 COTL1Q14019 142 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 C21orf62-AS1Q17RA5 79 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 SUMO4Q6EEV6 95 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 FAM159AQ6UWV7 190 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 ZFP2Q6ZN57 461 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 HIST1H4GQ99525 98 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 TIMM17AQ99595 171 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 SPTA1P02549 2419 aa6.25□□□□□ -1.41
CSTF3-208ENST00000528865 HIVEP3Q5T1R4 2406 aa6.24□□□□□ -1.41
CSTF3-208ENST00000528865 IGLV4-69A0A075B6H9 119 aa6.24□□□□□ -1.41
CSTF3-208ENST00000528865 TRBV27A0A0K0K1C4 114 aa6.24□□□□□ -1.41
CSTF3-208ENST00000528865 K7EQG2 157 aa6.24□□□□□ -1.41
CSTF3-208ENST00000528865 ATP5J2P56134 94 aa6.24□□□□□ -1.41
CSTF3-208ENST00000528865 PMVKQ15126 192 aa6.24□□□□□ -1.41
CSTF3-208ENST00000528865 ZNF479Q96JC4 524 aa6.24□□□□□ -1.41
CSTF3-208ENST00000528865 PRADC1Q9BSG0 188 aa6.24□□□□□ -1.41
CSTF3-208ENST00000528865 CFAP47Q6ZTR5 3102 aa6.24□□□□□ -1.41
CSTF3-208ENST00000528865 DMXL1Q9Y485 3027 aa6.23□□□□□ -1.41
CSTF3-208ENST00000528865 A0A0J9YX75 114 aa6.23□□□□□ -1.41
CSTF3-208ENST00000528865 HOXA3O43365 443 aaPredicted RBP6.23□□□□□ -1.41
CSTF3-208ENST00000528865 DUSP14O95147 198 aaKnown RBP6.23□□□□□ -1.41
CSTF3-208ENST00000528865 EDN2P20800 178 aa6.23□□□□□ -1.41
CSTF3-208ENST00000528865 UBE2D1P51668 147 aa6.23□□□□□ -1.41
CSTF3-208ENST00000528865 RHOHQ15669 191 aa6.23□□□□□ -1.41
CSTF3-208ENST00000528865 SPANXB1Q9NS25 103 aaPredicted RBP6.23□□□□□ -1.41
CSTF3-208ENST00000528865 ZNF256Q9Y2P7 627 aaPredicted RBP6.23□□□□□ -1.41
CSTF3-208ENST00000528865 MUC4Q99102 2169 aa6.23□□□□□ -1.41
CSTF3-208ENST00000528865 COL6A6A6NMZ7 2263 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 IGKV3-7A0A075B6H7 116 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 C11orf86A6NJI1 115 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 M0QY20 66 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 CD7P09564 240 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 SRD5A1P18405 259 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 ZNF876PQ49A33 203 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 MORN3Q6PF18 240 aaPredicted RBP6.22□□□□□ -1.41
CSTF3-208ENST00000528865 SYT8Q8NBV8 401 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 KIR2DL4Q99706 377 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 JPT2Q9H910 190 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 EDA2RQ9HAV5 297 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 PRO0461Q9UI25 63 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 ABCA2Q9BZC7 2435 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 BOD1L1Q8NFC6 3051 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 CACNA1BQ00975 2339 aa6.22□□□□□ -1.41
CSTF3-208ENST00000528865 LAMA5O15230 3695 aa6.21□□□□□ -1.41
CSTF3-208ENST00000528865 SPTBN1Q01082 2364 aaKnown RBP6.21□□□□□ -1.42
CSTF3-208ENST00000528865 IGHV1OR15-1A0A075B7D0 117 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 A0A096LNT2 108 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 TRAV12-3A0A0B4J271 114 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 A0A0J9YY99 117 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 SDHAF1A6NFY7 115 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 ZNF815PA8K554 130 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 A8MTW9 85 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 J3QLI3 93 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 ELANEP08246 267 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 HERVK_113P61574 105 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 DEFB112Q30KQ8 113 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 NSUN5P1Q3KNT7 163 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 NFE4Q86UQ8 179 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 LINC01356Q8N9X3 169 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 PLEKHB2Q96CS7 222 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 TP53TG1Q9Y2A0 90 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 NBASA2RRP1 2371 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 ZZEF1O43149 2961 aa6.21□□□□□ -1.42
CSTF3-208ENST00000528865 ADGRG4Q8IZF6 3080 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 TEX48A0A1B0GUV7 120 aa6.2□□□□□ -1.42
CSTF3-208ENST00000528865 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms