RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 MT-ND6P03923 174 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 AZU1P20160 251 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 WDR73Q6P4I2 378 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 ZNF575Q86XF7 245 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 TSKUQ8WUA8 353 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 SPATA25Q9BR10 227 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 LINC00467Q9BRT7 94 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 GNRH2O43555 120 aa8.77□□□□□ -1.01
TRAF3IP2-211ENST00000528599 SMIM6P0DI80 62 aa8.77□□□□□ -1.01
TRAF3IP2-211ENST00000528599 TDRG1Q3Y452 100 aa8.77□□□□□ -1.01
TRAF3IP2-211ENST00000528599 FAM159AQ6UWV7 190 aa8.77□□□□□ -1.01
TRAF3IP2-211ENST00000528599 HIST3H2BBQ8N257 126 aa8.77□□□□□ -1.01
TRAF3IP2-211ENST00000528599 DAZAP1Q96EP5 407 aaKnown RBP8.77□□□□□ -1.01
TRAF3IP2-211ENST00000528599 NEU1Q99519 415 aa8.77□□□□□ -1.01
TRAF3IP2-211ENST00000528599 TMSB15BA0A087X1C1 80 aa8.76□□□□□ -1.01
TRAF3IP2-211ENST00000528599 IFITM10A6NMD0 228 aa8.76□□□□□ -1.01
TRAF3IP2-211ENST00000528599 LINC01559Q495D7 138 aa8.76□□□□□ -1.01
TRAF3IP2-211ENST00000528599 GFRA4Q9GZZ7 299 aa8.76□□□□□ -1.01
TRAF3IP2-211ENST00000528599 NAT8BQ9UHF3 227 aa8.76□□□□□ -1.01
TRAF3IP2-211ENST00000528599 CBY3A6NI87 242 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 A8MWL6 223 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 P01737 135 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 FOXA3P55318 350 aaPredicted RBP8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 RRN3P1Q2M238 152 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 KCNS1Q96KK3 526 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 XKRY2A2RUG3 117 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 GRIFINA4D1Z8 144 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 TMEM189A5PLL7 270 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 SMIM9A6NGZ8 99 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 S100A2P29034 98 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 ATP5L2Q7Z4Y8 100 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 Q8NAQ8 132 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 OR2D3Q8NGH3 330 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 RNASE8Q8TDE3 154 aaKnown RBP8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 C12orf57Q99622 126 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 RPP21Q9H633 154 aaKnown RBP8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 MDFICQ9P1T7 246 aa8.75□□□□□ -1.01
TRAF3IP2-211ENST00000528599 IGHV3-16A0A0C4DH30 117 aa8.74□□□□□ -1.01
TRAF3IP2-211ENST00000528599 IGHV4-28A0A0C4DH34 117 aa8.74□□□□□ -1.01
TRAF3IP2-211ENST00000528599 PLAC8L1A1L4L8 177 aa8.74□□□□□ -1.01
TRAF3IP2-211ENST00000528599 HLA-DQA1P01909 254 aa8.74□□□□□ -1.01
TRAF3IP2-211ENST00000528599 TMEM136Q6ZRR5 245 aa8.74□□□□□ -1.01
TRAF3IP2-211ENST00000528599 C11orf72Q8NBR9 251 aa8.74□□□□□ -1.01
TRAF3IP2-211ENST00000528599 ZMAT4Q9H898 229 aa8.74□□□□□ -1.01
TRAF3IP2-211ENST00000528599 DEFB4AO15263 64 aa8.73□□□□□ -1.01
TRAF3IP2-211ENST00000528599 GZMBP10144 247 aa8.73□□□□□ -1.01
TRAF3IP2-211ENST00000528599 MIFP14174 115 aa8.73□□□□□ -1.01
TRAF3IP2-211ENST00000528599 NUP35Q8NFH5 326 aa8.73□□□□□ -1.01
TRAF3IP2-211ENST00000528599 TMEM263Q8WUH6 116 aaKnown RBP8.73□□□□□ -1.01
TRAF3IP2-211ENST00000528599 MRPL18Q9H0U6 180 aaKnown RBP8.73□□□□□ -1.01
TRAF3IP2-211ENST00000528599 GSN-AS1Q9NRJ2 163 aa8.73□□□□□ -1.01
TRAF3IP2-211ENST00000528599 TRGV11A0A075B6L2 103 aa8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 SNURFLB1AK76 121 aa8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 NHLRC4P0CG21 123 aaPredicted RBP8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 RNASE3P12724 160 aaKnown RBP8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 Q0VG73 95 aa8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 DNLZQ5SXM8 178 aa8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 ZNF493Q6ZR52 646 aa8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 C16orf74Q96GX8 76 aa8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 ASIPP42127 132 aa8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 EMP1P54849 157 aa8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 HIST1H2BLQ99880 126 aa8.72□□□□□ -1.01
TRAF3IP2-211ENST00000528599 A0A1B0GXF2 115 aa8.71□□□□□ -1.02
TRAF3IP2-211ENST00000528599 HIGD1CA8MV81 97 aa8.71□□□□□ -1.02
TRAF3IP2-211ENST00000528599 ESDP10768 282 aa8.71□□□□□ -1.02
TRAF3IP2-211ENST00000528599 TCL1AP56279 114 aa8.71□□□□□ -1.02
TRAF3IP2-211ENST00000528599 RPS20P60866 119 aaKnown RBP8.71□□□□□ -1.02
TRAF3IP2-211ENST00000528599 ZNF415Q09FC8 603 aa8.71□□□□□ -1.02
TRAF3IP2-211ENST00000528599 IL17DQ8TAD2 202 aa8.71□□□□□ -1.02
TRAF3IP2-211ENST00000528599 CSMD3Q7Z407 3707 aa8.71□□□□□ -1.02
TRAF3IP2-211ENST00000528599 H3BVH4 76 aa8.7□□□□□ -1.02
TRAF3IP2-211ENST00000528599 ARMS2P0C7Q2 107 aa8.7□□□□□ -1.02
TRAF3IP2-211ENST00000528599 S100A4P26447 101 aaKnown RBP8.7□□□□□ -1.02
TRAF3IP2-211ENST00000528599 GTSF1Q8WW33 167 aa8.7□□□□□ -1.02
TRAF3IP2-211ENST00000528599 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
TRAF3IP2-211ENST00000528599 TIMM8BQ9Y5J9 83 aaPredicted RBP8.7□□□□□ -1.02
TRAF3IP2-211ENST00000528599 A0A0J9YWU9 116 aa8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 IGLC6P0CF74 106 aa8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 OR10J3Q5JRS4 329 aa8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 OR10D4PQ8NGN7 298 aa8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 PACRGQ96M98 296 aaPredicted RBP8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 C11orf68Q9H3H3 251 aaKnown RBP8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 NOP10Q9NPE3 64 aaKnown RBP8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 SCRT2Q9NQ03 307 aa8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 APCSP02743 223 aa8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 FABP4P15090 132 aa8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 S100A12P80511 92 aa8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 DAZ2Q13117 558 aaKnown RBP8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 MRPL54Q6P161 138 aaKnown RBP8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 FER1L6-AS1Q8NA97 138 aa8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 TMEM18Q96B42 140 aa8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 SSBP4Q9BWG4 385 aaPredicted RBP8.69□□□□□ -1.02
TRAF3IP2-211ENST00000528599 DNAH7Q8WXX0 4024 aa8.68□□□□□ -1.02
TRAF3IP2-211ENST00000528599 MUC21A0A0G2JKD1 596 aa8.68□□□□□ -1.02
TRAF3IP2-211ENST00000528599 MUC21A0A140T8X8 626 aa8.68□□□□□ -1.02
TRAF3IP2-211ENST00000528599 A0A1B0GW15 77 aa8.68□□□□□ -1.02
TRAF3IP2-211ENST00000528599 SNAI2O43623 268 aa8.68□□□□□ -1.02
TRAF3IP2-211ENST00000528599 SPINK4O60575 86 aa8.68□□□□□ -1.02
TRAF3IP2-211ENST00000528599 OR5AL1P0C617 328 aa8.68□□□□□ -1.02
TRAF3IP2-211ENST00000528599 MED14OSP0DP75 135 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms