RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 SFTA2Q6UW10 78 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 GFRALQ6UXV0 394 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 MKXQ8IYA7 352 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 FGFBP3Q8TAT2 258 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 DCANP1Q8TF63 244 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 TMEM263Q8WUH6 116 aaKnown RBP2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 RNASE6Q93091 150 aaKnown RBP2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 ZNF714Q96N38 554 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 SLC50A1Q9BRV3 221 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 PROK2Q9HC23 129 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 MRPL35Q9NZE8 188 aaKnown RBP2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 RBM12B-AS1Q9P1G2 102 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 CABIN1Q9Y6J0 2220 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 COL4A6Q14031 1691 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 A0A0J9YY99 117 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 A0A1W2PQD3 144 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 RBMY1BA6NDE4 496 aaKnown RBP2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 RBMY1EA6NEQ0 496 aaKnown RBP2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 ZNF815PA8K554 130 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 IBA57-AS1B1ANH7 110 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 D6R8Y8 96 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 LST1O00453 97 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 NDUFB3O43676 98 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 TIMM17BO60830 172 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 IGKV1D-16P01601 117 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 CCKP06307 115 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 COX6CP09669 75 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 RBMY1DP0C7P1 496 aaKnown RBP2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 RFPL3SP0C7P2 107 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 LINC00271P0C7V0 271 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 RBMY1A1P0DJD3 496 aaKnown RBP2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 RBMY1CP0DJD4 496 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 INAFM2P0DMQ5 153 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 RNASE2P10153 161 aaKnown RBP2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 LGALS3P17931 250 aaKnown RBP2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 XCL1P47992 114 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 RBMY1FQ15415 496 aaKnown RBP2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 NSUN5P1Q3KNT7 163 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 PVRIGQ6DKI7 326 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 GUSBP11Q6P575 273 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 KTN1-AS1Q86SY8 53 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 SLC25A29Q8N8R3 303 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 LY6G5BQ8NDX9 201 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 KLHDC9Q8NEP7 349 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 NUP37Q8NFH4 326 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 TSACCQ96A04 125 aaPredicted RBP2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 TIMM21Q9BVV7 248 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 ZNF71Q9NQZ8 489 aaPredicted RBP2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 XCL2Q9UBD3 114 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 MOB4Q9Y3A3 225 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 ALPK2Q86TB3 2170 aa2.74□□□□□ -1.97
CLNS1A-209ENST00000527299 TRAV3A0A0B4J244 114 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 TRGV8A0A0C4DH27 118 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 LOC389332A0A1B0GUA5 103 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 TMEM223A0PJW6 202 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 FAM223BA6NKX1 122 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 NDUFS5O43920 106 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 ARMS2P0C7Q2 107 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 KLKP1Q107X0 134 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 EIF4EBP1Q13541 118 aaPredicted RBP2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 RHOHQ15669 191 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 PIGYQ3MUY2 71 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 MRPL51Q4U2R6 128 aaKnown RBP2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 FAM222AQ5U5X8 452 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 LYPD5Q6UWN5 251 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 SCGB1D4Q6XE38 83 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 LINC00322Q6ZN03 302 aaPredicted RBP2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 LINC00596Q86U02 117 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 FAM223AQ8IWN6 122 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 Q8N2B8 174 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 WFDC5Q8TCV5 224 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 FAM167A-AS1Q96KT0 104 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 RPP25Q9BUL9 199 aaKnown RBP2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 DEFB127Q9H1M4 99 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 PHPT1Q9NRX4 125 aaPredicted RBP2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 POLEQ07864 2286 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 SPAG17Q6Q759 2223 aa2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 TET2Q6N021 2002 aaPredicted RBP2.73□□□□□ -1.97
CLNS1A-209ENST00000527299 ABCA7Q8IZY2 2146 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 FER1L5A0AVI2 2057 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 IGKV1-27A0A075B6S5 117 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 TRAV7A0A075B6U4 112 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 TRAV13-2A0A0B4J235 113 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 IGKV1-8A0A0C4DH67 115 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 IGKV1-12A0A0C4DH73 117 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 TRBV27A0A0K0K1C4 114 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 LYRM9A8MSI8 78 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 IGKV1D-12P01611 117 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 IGHV3-13P01766 116 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 IGHV4-39P01824 125 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 CKS2P33552 79 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 SUB1P53999 127 aaKnown RBP eCLIP2.72□□□□□ -1.974e-6■■■□□ 17.7
CLNS1A-209ENST00000527299 DAD1P61803 113 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 SS18Q15532 418 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 LRRK1Q38SD2 2015 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 PAPPA-AS1Q5QFB9 102 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 SERTAD4-AS1Q5TG53 156 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 ATP5EP2Q5VTU8 51 aa2.72□□□□□ -1.97
CLNS1A-209ENST00000527299 WDR86Q86TI4 376 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms