RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 BVES-AS1Q5T3Y7 98 aa12.15□□□□□ -0.47
SNRNP35-204ENST00000527158 PRR9Q5T870 116 aa12.15□□□□□ -0.47
SNRNP35-204ENST00000527158 LGALS9CQ6DKI2 356 aa12.15□□□□□ -0.47
SNRNP35-204ENST00000527158 C11orf21Q9P2W6 132 aa12.15□□□□□ -0.47
SNRNP35-204ENST00000527158 HIVEP2P31629 2446 aa12.14□□□□□ -0.47
SNRNP35-204ENST00000527158 PPBPP02775 128 aa12.14□□□□□ -0.47
SNRNP35-204ENST00000527158 TWIST1Q15672 202 aa12.14□□□□□ -0.47
SNRNP35-204ENST00000527158 PRR31Q5SQ13 230 aa12.14□□□□□ -0.47
SNRNP35-204ENST00000527158 DEFB125Q8N687 156 aa12.14□□□□□ -0.47
SNRNP35-204ENST00000527158 RAX2Q96IS3 184 aa12.14□□□□□ -0.47
SNRNP35-204ENST00000527158 CITED2Q99967 270 aaPredicted RBP12.14□□□□□ -0.47
SNRNP35-204ENST00000527158 D6R8Y8 96 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 NUDT3O95989 172 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 MPV17L2Q567V2 206 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 DYNLRB2Q8TF09 96 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 SIGLEC8Q9NYZ4 499 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 NOTCH2Q04721 2471 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 MUC21A0A0G2JKD1 596 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 MUC21A0A140T8X8 626 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 CCL24O00175 119 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 CCL25O15444 150 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 RNASE4P34096 147 aaKnown RBP12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 MUC21Q5SSG8 566 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 APRG1Q8IVJ8 170 aa12.13□□□□□ -0.47
SNRNP35-204ENST00000527158 HBDP02042 147 aa12.12□□□□□ -0.47
SNRNP35-204ENST00000527158 IFI27P40305 119 aaPredicted RBP12.12□□□□□ -0.47
SNRNP35-204ENST00000527158 CNFNQ9BYD5 112 aa12.12□□□□□ -0.47
SNRNP35-204ENST00000527158 A0A0J9YX75 114 aa12.12□□□□□ -0.47
SNRNP35-204ENST00000527158 K7EP13 123 aa12.12□□□□□ -0.47
SNRNP35-204ENST00000527158 FHL3Q13643 280 aa12.12□□□□□ -0.47
SNRNP35-204ENST00000527158 Q6ZQT7 251 aa12.12□□□□□ -0.47
SNRNP35-204ENST00000527158 TRAV2A0A0B4J234 112 aa12.11□□□□□ -0.47
SNRNP35-204ENST00000527158 INAFM1C9JVW0 142 aa12.11□□□□□ -0.47
SNRNP35-204ENST00000527158 MRPL51Q4U2R6 128 aaKnown RBP12.11□□□□□ -0.47
SNRNP35-204ENST00000527158 DUSP14O95147 198 aaKnown RBP12.11□□□□□ -0.47
SNRNP35-204ENST00000527158 CKS2P33552 79 aa12.11□□□□□ -0.47
SNRNP35-204ENST00000527158 SEC11AP67812 179 aa12.11□□□□□ -0.47
SNRNP35-204ENST00000527158 AMN1Q8IY45 258 aa12.11□□□□□ -0.47
SNRNP35-204ENST00000527158 ODF3Q96PU9 254 aa12.11□□□□□ -0.47
SNRNP35-204ENST00000527158 KLLNB2CW77 178 aa12.1□□□□□ -0.47
SNRNP35-204ENST00000527158 LEPP41159 167 aa12.1□□□□□ -0.47
SNRNP35-204ENST00000527158 VAMP3Q15836 100 aa12.1□□□□□ -0.47
SNRNP35-204ENST00000527158 MTORP42345 2549 aa12.1□□□□□ -0.47
SNRNP35-204ENST00000527158 LINC01546A6NGU7 62 aa12.09□□□□□ -0.47
SNRNP35-204ENST00000527158 H0Y8G0 127 aa12.09□□□□□ -0.47
SNRNP35-204ENST00000527158 DEFB114Q30KQ6 69 aa12.09□□□□□ -0.47
SNRNP35-204ENST00000527158 FOXI2Q6ZQN5 318 aa12.09□□□□□ -0.47
SNRNP35-204ENST00000527158 TMEM61Q8N0U2 210 aa12.09□□□□□ -0.47
SNRNP35-204ENST00000527158 OR4C5Q8NGB2 326 aa12.09□□□□□ -0.47
SNRNP35-204ENST00000527158 TAX1BP3O14907 124 aa12.09□□□□□ -0.47
SNRNP35-204ENST00000527158 SIVA1O15304 175 aa12.09□□□□□ -0.47
SNRNP35-204ENST00000527158 PROK1P58294 105 aa12.09□□□□□ -0.47
SNRNP35-204ENST00000527158 A0A096LNJ9 63 aa12.08□□□□□ -0.48
SNRNP35-204ENST00000527158 MAP1LC3AQ9H492 121 aa12.08□□□□□ -0.48
SNRNP35-204ENST00000527158 TIMM8BQ9Y5J9 83 aaPredicted RBP12.08□□□□□ -0.48
SNRNP35-204ENST00000527158 OTOGQ6ZRI0 2925 aa12.08□□□□□ -0.48
SNRNP35-204ENST00000527158 ANK3Q12955 4377 aaKnown RBP12.08□□□□□ -0.48
SNRNP35-204ENST00000527158 IGKV3-20P01619 116 aa12.08□□□□□ -0.48
SNRNP35-204ENST00000527158 KIR3DS1Q14943 382 aa12.08□□□□□ -0.48
SNRNP35-204ENST00000527158 ANXA2RQ3ZCQ2 193 aa12.08□□□□□ -0.48
SNRNP35-204ENST00000527158 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
SNRNP35-204ENST00000527158 LOC389332A0A1B0GUA5 103 aa12.07□□□□□ -0.48
SNRNP35-204ENST00000527158 S100A4P26447 101 aaKnown RBP12.07□□□□□ -0.48
SNRNP35-204ENST00000527158 ASIPP42127 132 aa12.07□□□□□ -0.48
SNRNP35-204ENST00000527158 CACNG7P62955 275 aa12.07□□□□□ -0.48
SNRNP35-204ENST00000527158 IFI27L1Q96BM0 104 aa12.07□□□□□ -0.48
SNRNP35-204ENST00000527158 MSRB1Q9NZV6 116 aa12.07□□□□□ -0.48
SNRNP35-204ENST00000527158 SNAI2O43623 268 aa12.06□□□□□ -0.48
SNRNP35-204ENST00000527158 DEFB131AP59861 70 aa12.06□□□□□ -0.48
SNRNP35-204ENST00000527158 CD300EQ496F6 205 aaPredicted RBP12.06□□□□□ -0.48
SNRNP35-204ENST00000527158 SPANXN1Q5VSR9 72 aa12.06□□□□□ -0.48
SNRNP35-204ENST00000527158 CUBNO60494 3623 aa12.06□□□□□ -0.48
SNRNP35-204ENST00000527158 H3BVH4 76 aa12.06□□□□□ -0.48
SNRNP35-204ENST00000527158 FAM159AQ6UWV7 190 aa12.06□□□□□ -0.48
SNRNP35-204ENST00000527158 SMIM15Q7Z3B0 74 aa12.06□□□□□ -0.48
SNRNP35-204ENST00000527158 NF1P21359 2839 aa12.05□□□□□ -0.48
SNRNP35-204ENST00000527158 TRAV25A0A0B4J276 109 aa12.05□□□□□ -0.48
SNRNP35-204ENST00000527158 C7orf71A4D174 169 aa12.05□□□□□ -0.48
SNRNP35-204ENST00000527158 NCR2O95944 276 aa12.05□□□□□ -0.48
SNRNP35-204ENST00000527158 CDKN1BP46527 198 aa12.05□□□□□ -0.48
SNRNP35-204ENST00000527158 TMEM97Q5BJF2 176 aa12.05□□□□□ -0.48
SNRNP35-204ENST00000527158 C2orf91Q6ZV80 131 aa12.05□□□□□ -0.48
SNRNP35-204ENST00000527158 SPAG8Q99932 426 aaPredicted RBP12.05□□□□□ -0.48
SNRNP35-204ENST00000527158 IGHV4-4A0A075B6R2 117 aa12.05□□□□□ -0.48
SNRNP35-204ENST00000527158 BOD1L2Q8IYS8 172 aa12.05□□□□□ -0.48
SNRNP35-204ENST00000527158 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
SNRNP35-204ENST00000527158 A6NDN8 102 aa12.04□□□□□ -0.48
SNRNP35-204ENST00000527158 NPYP01303 97 aa12.04□□□□□ -0.48
SNRNP35-204ENST00000527158 MCRIP2Q9BUT9 160 aaKnown RBP12.04□□□□□ -0.48
SNRNP35-204ENST00000527158 MED14OSP0DP75 135 aa12.03□□□□□ -0.48
SNRNP35-204ENST00000527158 FGF6P10767 208 aa12.03□□□□□ -0.48
SNRNP35-204ENST00000527158 NSUN5P1Q3KNT7 163 aa12.03□□□□□ -0.48
SNRNP35-204ENST00000527158 KNCNA6PVL3 124 aa12.03□□□□□ -0.48
SNRNP35-204ENST00000527158 GNRH2O43555 120 aa12.03□□□□□ -0.48
SNRNP35-204ENST00000527158 HSD52Q0P140 79 aa12.03□□□□□ -0.48
SNRNP35-204ENST00000527158 SPINK13Q1W4C9 94 aa12.03□□□□□ -0.48
SNRNP35-204ENST00000527158 Q6ZVH6 145 aa12.03□□□□□ -0.48
SNRNP35-204ENST00000527158 RNF185Q96GF1 192 aa12.03□□□□□ -0.48
SNRNP35-204ENST00000527158 PHLDA3Q9Y5J5 127 aa12.03□□□□□ -0.48
SNRNP35-204ENST00000527158 CRLF1O75462 422 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms