RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 KIAA1644Q3SXP7 199 aa15.02■□□□□ -0
SMCO4-203ENST00000526869 OR10J3Q5JRS4 329 aa15.02■□□□□ -0
SMCO4-203ENST00000526869 SPANXN1Q5VSR9 72 aa15.02■□□□□ -0
SMCO4-203ENST00000526869 FAM104BQ5XKR9 115 aa15.02■□□□□ -0
SMCO4-203ENST00000526869 TMEM256Q8N2U0 113 aa15.02■□□□□ -0
SMCO4-203ENST00000526869 C9orf85Q96MD7 179 aa15.02■□□□□ -0
SMCO4-203ENST00000526869 PHLDA3Q9Y5J5 127 aa15.02■□□□□ -0
SMCO4-203ENST00000526869 SRIP30626 198 aa15.01□□□□□ -0.01
SMCO4-203ENST00000526869 SMIM15Q7Z3B0 74 aa15.01□□□□□ -0.01
SMCO4-203ENST00000526869 Q8N1Y9 231 aa15.01□□□□□ -0.01
SMCO4-203ENST00000526869 ALKBH7Q9BT30 221 aaPredicted RBP15.01□□□□□ -0.01
SMCO4-203ENST00000526869 IGLL1P15814 213 aa15□□□□□ -0.01
SMCO4-203ENST00000526869 C1QTNF4Q9BXJ3 329 aa15□□□□□ -0.01
SMCO4-203ENST00000526869 WFDC10AQ9H1F0 79 aa15□□□□□ -0.01
SMCO4-203ENST00000526869 MSRB1Q9NZV6 116 aa15□□□□□ -0.01
SMCO4-203ENST00000526869 TP53TG3Q9ULZ0 132 aa14.99□□□□□ -0.01
SMCO4-203ENST00000526869 CBY3A6NI87 242 aa14.98□□□□□ -0.01
SMCO4-203ENST00000526869 RIPPLY3P57055 190 aa14.98□□□□□ -0.01
SMCO4-203ENST00000526869 XCL2Q9UBD3 114 aa14.98□□□□□ -0.01
SMCO4-203ENST00000526869 TIMM8BQ9Y5J9 83 aaPredicted RBP14.98□□□□□ -0.01
SMCO4-203ENST00000526869 U3KQK5 164 aa14.98□□□□□ -0.01
SMCO4-203ENST00000526869 SSTP61278 116 aa14.97□□□□□ -0.01
SMCO4-203ENST00000526869 DEFB125Q8N687 156 aa14.97□□□□□ -0.01
SMCO4-203ENST00000526869 LINC01587Q99440 93 aa14.97□□□□□ -0.01
SMCO4-203ENST00000526869 STAB1Q9NY15 2570 aa14.97□□□□□ -0.01
SMCO4-203ENST00000526869 AMN1Q8IY45 258 aa14.96□□□□□ -0.01
SMCO4-203ENST00000526869 HIST3H2BBQ8N257 126 aa14.96□□□□□ -0.01
SMCO4-203ENST00000526869 SYT8Q8NBV8 401 aa14.96□□□□□ -0.01
SMCO4-203ENST00000526869 C18orf32Q8TCD1 76 aa14.96□□□□□ -0.01
SMCO4-203ENST00000526869 AP1S3Q96PC3 154 aa14.96□□□□□ -0.01
SMCO4-203ENST00000526869 MDFICQ9P1T7 246 aa14.96□□□□□ -0.01
SMCO4-203ENST00000526869 M0R381 172 aa14.95□□□□□ -0.02
SMCO4-203ENST00000526869 PPBPP02775 128 aa14.95□□□□□ -0.02
SMCO4-203ENST00000526869 GIG44P09565 113 aaPredicted RBP14.95□□□□□ -0.02
SMCO4-203ENST00000526869 RAB4AP20338 218 aa14.95□□□□□ -0.02
SMCO4-203ENST00000526869 ZNF415Q09FC8 603 aa14.95□□□□□ -0.02
SMCO4-203ENST00000526869 MRPL51Q4U2R6 128 aaKnown RBP14.95□□□□□ -0.02
SMCO4-203ENST00000526869 PRR31Q5SQ13 230 aa14.95□□□□□ -0.02
SMCO4-203ENST00000526869 C1orf158Q8N1D5 194 aa14.95□□□□□ -0.02
SMCO4-203ENST00000526869 PTH2Q96A98 100 aa14.95□□□□□ -0.02
SMCO4-203ENST00000526869 RNF185Q96GF1 192 aa14.95□□□□□ -0.02
SMCO4-203ENST00000526869 GOLT1BQ9Y3E0 138 aa14.95□□□□□ -0.02
SMCO4-203ENST00000526869 ESDP10768 282 aa14.94□□□□□ -0.02
SMCO4-203ENST00000526869 RPL35AP18077 110 aaKnown RBP14.94□□□□□ -0.02
SMCO4-203ENST00000526869 BAGE3Q86Y29 109 aa14.94□□□□□ -0.02
SMCO4-203ENST00000526869 ORMDL3Q8N138 153 aa14.94□□□□□ -0.02
SMCO4-203ENST00000526869 TMEM208Q9BTX3 173 aa14.94□□□□□ -0.02
SMCO4-203ENST00000526869 EVI2AP22794 236 aa14.93□□□□□ -0.02
SMCO4-203ENST00000526869 PIK3CD-AS1Q5SR53 167 aa14.93□□□□□ -0.02
SMCO4-203ENST00000526869 DPH3P1Q9H4G8 78 aa14.93□□□□□ -0.02
SMCO4-203ENST00000526869 ZMAT5Q9UDW3 170 aaKnown RBP14.93□□□□□ -0.02
SMCO4-203ENST00000526869 COL6A5A8TX70 2615 aa14.92□□□□□ -0.02
SMCO4-203ENST00000526869 SPXQ9BT56 116 aa14.92□□□□□ -0.02
SMCO4-203ENST00000526869 LAMTOR2Q9Y2Q5 125 aa14.92□□□□□ -0.02
SMCO4-203ENST00000526869 NOTCH3Q9UM47 2321 aa14.91□□□□□ -0.02
SMCO4-203ENST00000526869 D6R8Y8 96 aa14.91□□□□□ -0.02
SMCO4-203ENST00000526869 CKS2P33552 79 aa14.91□□□□□ -0.02
SMCO4-203ENST00000526869 CSNK1G2-AS1Q8NCQ2 148 aa14.91□□□□□ -0.02
SMCO4-203ENST00000526869 MRAP2Q96G30 205 aa14.91□□□□□ -0.02
SMCO4-203ENST00000526869 PRELID3AQ96N28 172 aa14.91□□□□□ -0.02
SMCO4-203ENST00000526869 CSTL1Q9H114 145 aa14.91□□□□□ -0.02
SMCO4-203ENST00000526869 SERF1AO75920 110 aa14.9□□□□□ -0.02
SMCO4-203ENST00000526869 S100A2P29034 98 aa14.9□□□□□ -0.02
SMCO4-203ENST00000526869 LINC00310P59036 64 aa14.9□□□□□ -0.02
SMCO4-203ENST00000526869 POM121L12Q8N7R1 296 aa14.9□□□□□ -0.02
SMCO4-203ENST00000526869 C11orf72Q8NBR9 251 aa14.9□□□□□ -0.02
SMCO4-203ENST00000526869 GSN-AS1Q9NRJ2 163 aa14.9□□□□□ -0.02
SMCO4-203ENST00000526869 KIR2DL5BA0A0G2JN68 375 aa14.89□□□□□ -0.03
SMCO4-203ENST00000526869 KIR2DL5BA0A0G2JPC4 375 aa14.89□□□□□ -0.03
SMCO4-203ENST00000526869 IFITM10A6NMD0 228 aa14.89□□□□□ -0.03
SMCO4-203ENST00000526869 SPRY2O43597 315 aa14.89□□□□□ -0.03
SMCO4-203ENST00000526869 EGFEM1PQ0D2K5 195 aa14.89□□□□□ -0.03
SMCO4-203ENST00000526869 KIR2DL5AQ8N109 375 aa14.89□□□□□ -0.03
SMCO4-203ENST00000526869 KIR2DL5BQ8NHK3 375 aa14.89□□□□□ -0.03
SMCO4-203ENST00000526869 NDUFAF3Q9BU61 184 aa14.89□□□□□ -0.03
SMCO4-203ENST00000526869 KIF25-AS1Q9Y6Z4 181 aa14.89□□□□□ -0.03
SMCO4-203ENST00000526869 MUC4Q99102 2169 aa14.89□□□□□ -0.03
SMCO4-203ENST00000526869 M0R2P5 195 aa14.88□□□□□ -0.03
SMCO4-203ENST00000526869 HTN1P15515 57 aa14.88□□□□□ -0.03
SMCO4-203ENST00000526869 IQCJQ1A5X6 159 aa14.88□□□□□ -0.03
SMCO4-203ENST00000526869 ZNF705AQ6ZN79 300 aaPredicted RBP14.88□□□□□ -0.03
SMCO4-203ENST00000526869 IL17DQ8TAD2 202 aa14.88□□□□□ -0.03
SMCO4-203ENST00000526869 RCHY1Q96PM5 261 aa14.88□□□□□ -0.03
SMCO4-203ENST00000526869 SMIM17P0DL12 118 aa14.87□□□□□ -0.03
SMCO4-203ENST00000526869 C14orf178Q8N769 122 aaPredicted RBP14.87□□□□□ -0.03
SMCO4-203ENST00000526869 TMEM263Q8WUH6 116 aaKnown RBP14.87□□□□□ -0.03
SMCO4-203ENST00000526869 PACRGQ96M98 296 aaPredicted RBP14.87□□□□□ -0.03
SMCO4-203ENST00000526869 ZNF876PQ49A33 203 aa14.86□□□□□ -0.03
SMCO4-203ENST00000526869 PDZD11Q5EBL8 140 aa14.86□□□□□ -0.03
SMCO4-203ENST00000526869 RNASE8Q8TDE3 154 aaKnown RBP14.86□□□□□ -0.03
SMCO4-203ENST00000526869 TMEM18Q96B42 140 aa14.86□□□□□ -0.03
SMCO4-203ENST00000526869 CHCHD1Q96BP2 118 aaKnown RBP14.86□□□□□ -0.03
SMCO4-203ENST00000526869 HIST1H2BLQ99880 126 aa14.86□□□□□ -0.03
SMCO4-203ENST00000526869 NUPR1O60356 82 aa14.85□□□□□ -0.03
SMCO4-203ENST00000526869 APOC4P55056 127 aa14.85□□□□□ -0.03
SMCO4-203ENST00000526869 LINC00315P59091 139 aa14.85□□□□□ -0.03
SMCO4-203ENST00000526869 IGHV3OR16-12A0A075B7B8 117 aa14.84□□□□□ -0.03
SMCO4-203ENST00000526869 SMKR1H3BMG3 65 aa14.84□□□□□ -0.03
SMCO4-203ENST00000526869 NCR2O95944 276 aa14.84□□□□□ -0.03
SMCO4-203ENST00000526869 NPYP01303 97 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms