RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 BCL7BQ9BQE9 202 aa6.76□□□□□ -1.33
CTNNA1-234ENST00000522227 RAB26Q9ULW5 256 aa6.76□□□□□ -1.33
CTNNA1-234ENST00000522227 ANKRD20A5PA0PJZ0 165 aa6.75□□□□□ -1.33
CTNNA1-234ENST00000522227 IFNA7P01567 189 aa6.75□□□□□ -1.33
CTNNA1-234ENST00000522227 BAXQ07812 192 aa6.75□□□□□ -1.33
CTNNA1-234ENST00000522227 LINC00269Q8N2A0 174 aa6.75□□□□□ -1.33
CTNNA1-234ENST00000522227 C9orf85Q96MD7 179 aa6.75□□□□□ -1.33
CTNNA1-234ENST00000522227 CHCHD5Q9BSY4 110 aa6.75□□□□□ -1.33
CTNNA1-234ENST00000522227 VCX3BQ9H321 246 aa6.75□□□□□ -1.33
CTNNA1-234ENST00000522227 C11orf21Q9P2W6 132 aa6.75□□□□□ -1.33
CTNNA1-234ENST00000522227 LENEPQ9Y5L5 61 aa6.75□□□□□ -1.33
CTNNA1-234ENST00000522227 UBE2L5PA0A1B0GUS4 154 aa6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 FAM24AA6NFZ4 105 aa6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 RGS5O15539 181 aa6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 NDUFS6O75380 124 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 FAM74A4Q5TZK3 123 aa6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 ZFP2Q6ZN57 461 aa6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 OR10G7Q8NGN6 311 aa6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 TVP23CQ96ET8 276 aa6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 GGACTQ9BVM4 153 aa6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 MIXL1Q9H2W2 232 aa6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 TREM1Q9NP99 234 aa6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 RABL2AQ9UBK7 228 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-234ENST00000522227 A8MWV9 139 aa6.73□□□□□ -1.33
CTNNA1-234ENST00000522227 CST7O76096 145 aa6.73□□□□□ -1.33
CTNNA1-234ENST00000522227 RPL29P47914 159 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-234ENST00000522227 MRPS10P82664 201 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-234ENST00000522227 IL18Q14116 193 aa6.73□□□□□ -1.33
CTNNA1-234ENST00000522227 FXYD5Q96DB9 178 aa6.73□□□□□ -1.33
CTNNA1-234ENST00000522227 FAM167A-AS1Q96KT0 104 aa6.73□□□□□ -1.33
CTNNA1-234ENST00000522227 NMES1Q9C002 83 aa6.73□□□□□ -1.33
CTNNA1-234ENST00000522227 GSKIPQ9P0R6 139 aa6.73□□□□□ -1.33
CTNNA1-234ENST00000522227 WDR83OSQ9Y284 106 aa6.73□□□□□ -1.33
CTNNA1-234ENST00000522227 A0A096LNI7 61 aa6.72□□□□□ -1.33
CTNNA1-234ENST00000522227 PTTG1O95997 202 aa6.72□□□□□ -1.33
CTNNA1-234ENST00000522227 RNASE3P12724 160 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-234ENST00000522227 BCAP31P51572 246 aa6.72□□□□□ -1.33
CTNNA1-234ENST00000522227 GOLT1AQ6ZVE7 132 aa6.72□□□□□ -1.33
CTNNA1-234ENST00000522227 MCFD2Q8NI22 146 aa6.72□□□□□ -1.33
CTNNA1-234ENST00000522227 AP3S1Q92572 193 aa6.72□□□□□ -1.33
CTNNA1-234ENST00000522227 SGK494Q96LW2 274 aa6.72□□□□□ -1.33
CTNNA1-234ENST00000522227 UQCC1Q9NVA1 299 aa6.72□□□□□ -1.33
CTNNA1-234ENST00000522227 TRBV6-8A0A0A6YYG3 113 aa6.71□□□□□ -1.34
CTNNA1-234ENST00000522227 OR7C2O60412 319 aa6.71□□□□□ -1.34
CTNNA1-234ENST00000522227 FGF7P21781 194 aa6.71□□□□□ -1.34
CTNNA1-234ENST00000522227 ZNF80P51504 273 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-234ENST00000522227 SRSF3P84103 164 aaKnown RBP6.71□□□□□ -1.34
CTNNA1-234ENST00000522227 GAGE6Q13070 117 aa6.71□□□□□ -1.34
CTNNA1-234ENST00000522227 HIGD2BQ4VC39 106 aa6.71□□□□□ -1.34
CTNNA1-234ENST00000522227 UFSP1Q6NVU6 142 aa6.71□□□□□ -1.34
CTNNA1-234ENST00000522227 INO80EQ8NBZ0 244 aaPredicted RBP6.71□□□□□ -1.34
CTNNA1-234ENST00000522227 GFRA4Q9GZZ7 299 aa6.71□□□□□ -1.34
CTNNA1-234ENST00000522227 C7orf66A4D0T2 115 aa6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 L7N2F9 121 aa6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 CTDSP2O14595 271 aa6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 TSPAN13O95857 204 aa6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 S100A4P26447 101 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 RPS10P46783 165 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 TAS2R30P59541 319 aa6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 S100A10P60903 97 aa6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 VAMP2P63027 116 aa6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 RPL36AP83881 106 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 RPL36ALQ969Q0 106 aaKnown RBP6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 FUNDC2Q9BWH2 189 aa6.7□□□□□ -1.34
CTNNA1-234ENST00000522227 KRTAP9-7A8MTY7 169 aa6.69□□□□□ -1.34
CTNNA1-234ENST00000522227 UBE2D3P61077 147 aa6.69□□□□□ -1.34
CTNNA1-234ENST00000522227 UBE2D2P62837 147 aa6.69□□□□□ -1.34
CTNNA1-234ENST00000522227 RBX1P62877 108 aa6.69□□□□□ -1.34
CTNNA1-234ENST00000522227 IAH1Q2TAA2 248 aaPredicted RBP6.69□□□□□ -1.34
CTNNA1-234ENST00000522227 CMTM2Q8TAZ6 248 aa6.69□□□□□ -1.34
CTNNA1-234ENST00000522227 PTH2Q96A98 100 aa6.69□□□□□ -1.34
CTNNA1-234ENST00000522227 DIRAS2Q96HU8 199 aa6.69□□□□□ -1.34
CTNNA1-234ENST00000522227 PRR34Q9NV39 138 aa6.69□□□□□ -1.34
CTNNA1-234ENST00000522227 EIF3GO75821 320 aaKnown RBP eCLIP6.68□□□□□ -1.34
CTNNA1-234ENST00000522227 GNG5P63218 68 aa6.68□□□□□ -1.34
CTNNA1-234ENST00000522227 UBE2L3P68036 154 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-234ENST00000522227 REG3AQ06141 175 aa6.68□□□□□ -1.34
CTNNA1-234ENST00000522227 SPANXN2Q5MJ10 180 aa6.68□□□□□ -1.34
CTNNA1-234ENST00000522227 TMED6Q8WW62 240 aa6.68□□□□□ -1.34
CTNNA1-234ENST00000522227 SLIRPQ9GZT3 109 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-234ENST00000522227 LSM5Q9Y4Y9 91 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-234ENST00000522227 TRBV7-3A0A075B6L6 115 aa6.67□□□□□ -1.34
CTNNA1-234ENST00000522227 GCGP01275 180 aa6.67□□□□□ -1.34
CTNNA1-234ENST00000522227 MBPP02686 304 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-234ENST00000522227 MT-ND6P03923 174 aa6.67□□□□□ -1.34
CTNNA1-234ENST00000522227 LINC01547P58512 204 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-234ENST00000522227 Q9H521 79 aa6.67□□□□□ -1.34
CTNNA1-234ENST00000522227 C9orf170A2RU37 121 aa6.66□□□□□ -1.34
CTNNA1-234ENST00000522227 RHODO00212 210 aa6.66□□□□□ -1.34
CTNNA1-234ENST00000522227 CTF1Q16619 201 aa6.66□□□□□ -1.34
CTNNA1-234ENST00000522227 C1orf137Q5JT78 98 aa6.66□□□□□ -1.34
CTNNA1-234ENST00000522227 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
CTNNA1-234ENST00000522227 NDFIP1Q9BT67 221 aa6.66□□□□□ -1.34
CTNNA1-234ENST00000522227 NAA50Q9GZZ1 169 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-234ENST00000522227 H3BVH4 76 aa6.65□□□□□ -1.34
CTNNA1-234ENST00000522227 FAUP35544 74 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-234ENST00000522227 UBE2D1P51668 147 aa6.65□□□□□ -1.34
CTNNA1-234ENST00000522227 THAP6Q8TBB0 222 aa6.65□□□□□ -1.34
CTNNA1-234ENST00000522227 NPCDR1Q9BY65 106 aa6.65□□□□□ -1.34
CTNNA1-234ENST00000522227 VCX3AQ9NNX9 186 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms