RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	XIRP1	Q702N8	1843 aa	Known RBP	-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846	SSPO	A2VEC9	5147 aa		-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846	ARHGAP31	Q2M1Z3	1444 aa		-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846	PAEP	P09466	180 aa		-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846	AKR1D1	P51857	326 aa		-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846		Q5BKY6	102 aa		-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846	SLC25A26	Q70HW3	274 aa		-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846	BET1L	Q9NYM9	111 aa		-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846	TAS2R8	Q9NYW2	309 aa		-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846	CALML5	Q9NZT1	146 aa		-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846	NDUFAF1	Q9Y375	327 aa		-0.01	□□□□□ -2.41
MSR1-211	ENST00000520846	LRP1	Q07954	4544 aa	Known RBP	-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846	TRAV2	A0A0B4J234	112 aa		-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846	CXorf51A	A0A1B0GTR3	108 aa		-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846		F2Z2F3	143 aa		-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846	TMEM91	Q6ZNR0	172 aa		-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846	SELENOS	Q9BQE4	189 aa		-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846	HSPB11	Q9Y547	144 aa		-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846	F5	P12259	2224 aa		-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846	CAD	P27708	2225 aa		-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846	CACNA1C	Q13936	2221 aa		-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846	KDM5C	P41229	1560 aa		-0.02	□□□□□ -2.41
MSR1-211	ENST00000520846	SYNE2	Q8WXH0	6885 aa	Known RBP	-0.03	□□□□□ -2.41
MSR1-211	ENST00000520846	CCDC171	Q6TFL3	1326 aa		-0.03	□□□□□ -2.41
MSR1-211	ENST00000520846	ZNF670-ZNF695	F2Z2N8	137 aa		-0.03	□□□□□ -2.41
MSR1-211	ENST00000520846	GINS2	Q9Y248	185 aa		-0.03	□□□□□ -2.41
MSR1-211	ENST00000520846	HRNR	Q86YZ3	2850 aa	Predicted RBP	-0.03	□□□□□ -2.41
MSR1-211	ENST00000520846	PLXNA2	O75051	1894 aa		-0.03	□□□□□ -2.41
MSR1-211	ENST00000520846	TRAV36DV7	A0A075B6V5	113 aa		-0.04	□□□□□ -2.42
MSR1-211	ENST00000520846		A0A1B0GW64	132 aa		-0.04	□□□□□ -2.42
MSR1-211	ENST00000520846		A0A1B0GX51	115 aa		-0.04	□□□□□ -2.42
MSR1-211	ENST00000520846	SMIM24	O75264	130 aa		-0.04	□□□□□ -2.42
MSR1-211	ENST00000520846	MT-ND4L	P03901	98 aa		-0.04	□□□□□ -2.42
MSR1-211	ENST00000520846	MAGOHB	Q96A72	148 aa	Known RBP	-0.04	□□□□□ -2.42
MSR1-211	ENST00000520846	POLQ	O75417	2590 aa		-0.04	□□□□□ -2.42
MSR1-211	ENST00000520846	OTOG	Q6ZRI0	2925 aa		-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	MACF1	Q9UPN3	7388 aa	Known RBP	-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	TFF1	P04155	84 aa		-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	HLA-DRB4	P13762	266 aa		-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	ELOF1	P60002	83 aa	Known RBP	-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	EMX2	Q04743	252 aa		-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	OR8B8	Q15620	311 aa		-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	BPESC1	Q9GZL8	116 aa		-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	BANF2	Q9H503	90 aa		-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	DNAJC15	Q9Y5T4	150 aa		-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	HLA-DRB4	X5D2U9	266 aa		-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	TNS1	Q9HBL0	1735 aa	Known RBP	-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	SOGA1	O94964	1423 aa		-0.05	□□□□□ -2.42
MSR1-211	ENST00000520846	CDK13	Q14004	1512 aa	Known RBP	-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	TCRBV3S1	A0A5B6	114 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	YPEL1	O60688	119 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	RBP4	P02753	201 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	SCT	P09683	121 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	TMEM244	Q5VVB8	128 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	NDUFA11	Q86Y39	141 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	SNX29P2	Q8IUI4	249 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	TCTE3	Q8IZS6	198 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	ATP6V0E2	Q8NHE4	81 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	DYNLRB2	Q8TF09	96 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	SPANXC	Q9NY87	97 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	NOP16	Q9Y3C1	178 aa	Known RBP	-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	UHRF1BP1L	A0JNW5	1464 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	AHCTF1	Q8WYP5	2266 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	UNC13B	O14795	1591 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	LAMC3	Q9Y6N6	1575 aa		-0.06	□□□□□ -2.42
MSR1-211	ENST00000520846	BORCS7-ASMT	A0A0B4J1R7	106 aa		-0.07	□□□□□ -2.42
MSR1-211	ENST00000520846	RBAKDN	A6NC62	111 aa		-0.07	□□□□□ -2.42
MSR1-211	ENST00000520846	DEGS1	O15121	323 aa		-0.07	□□□□□ -2.42
MSR1-211	ENST00000520846	CMPK1	P30085	196 aa		-0.07	□□□□□ -2.42
MSR1-211	ENST00000520846	COX6A2	Q02221	97 aa		-0.07	□□□□□ -2.42
MSR1-211	ENST00000520846	OR2T2	Q6IF00	324 aa		-0.07	□□□□□ -2.42
MSR1-211	ENST00000520846	ZNF142	P52746	1687 aa	Predicted RBP	-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	VIRMA	Q69YN4	1812 aa	Known RBP	-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	COL7A1	Q02388	2944 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	CASZ1	Q86V15	1759 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	GNG14	A0A1W2PPG7	69 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	TNFSF15	O95150	251 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	SLC25A6	P12236	298 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	CYP2G1P	Q6ZSU1	146 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	FAM213B	Q8TBF2	198 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	SPANXA1	Q9NS26	97 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	ERG28	Q9UKR5	140 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	HIGD1A	Q9Y241	93 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	KIAA0100	Q14667	2235 aa	Known RBP	-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846	HIVEP3	Q5T1R4	2406 aa		-0.08	□□□□□ -2.42
MSR1-211	ENST00000520846		H0YJX3	145 aa		-0.09	□□□□□ -2.42
MSR1-211	ENST00000520846	NBEAP1	P0C6P0	100 aa		-0.09	□□□□□ -2.42
MSR1-211	ENST00000520846	KIF13A	Q9H1H9	1805 aa		-0.09	□□□□□ -2.42
MSR1-211	ENST00000520846	ANKRD17	O75179	2603 aa	Known RBP	-0.09	□□□□□ -2.42
MSR1-211	ENST00000520846	ARAP1	Q96P48	1450 aa		-0.1	□□□□□ -2.42
MSR1-211	ENST00000520846	GVQW2	A0A096LPI5	108 aa	Predicted RBP	-0.1	□□□□□ -2.43
MSR1-211	ENST00000520846	COX4I1	P13073	169 aa		-0.1	□□□□□ -2.43
MSR1-211	ENST00000520846	CCDC153	Q494R4	210 aa		-0.1	□□□□□ -2.43
MSR1-211	ENST00000520846	CLLU1	Q5K131	121 aa		-0.1	□□□□□ -2.43
MSR1-211	ENST00000520846	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		-0.1	□□□□□ -2.43
MSR1-211	ENST00000520846	ATP11AUN	Q6ZP68	121 aa		-0.1	□□□□□ -2.43
MSR1-211	ENST00000520846	SMIM11B	Q8TCY0	68 aa		-0.1	□□□□□ -2.43
MSR1-211	ENST00000520846	IFI27L1	Q96BM0	104 aa		-0.1	□□□□□ -2.43
MSR1-211	ENST00000520846	PLXNA1	Q9UIW2	1896 aa		-0.1	□□□□□ -2.43
MSR1-211	ENST00000520846	DOCK11	Q5JSL3	2073 aa		-0.1	□□□□□ -2.43

Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms