RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 ATP5LO75964 103 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 MT-ATP8P03928 68 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 CRYBB3P26998 211 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 PRSS3P35030 304 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 TAS2R46P59540 309 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 FXYD4P59646 89 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 HERV-K104P61576 105 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 ERVK-16P61578 105 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 KLF9Q13886 244 aaPredicted RBP4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 Q6AWC8 147 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 LGALS9CQ6DKI2 356 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 GOLT1AQ6ZVE7 132 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 FAM231DQ6ZW35 169 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 STPG3Q8N7X2 389 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 AP1S3Q96PC3 154 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 SLC25A21Q9BQT8 299 aaPredicted RBP4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 MRPL32Q9BYC8 188 aaKnown RBP4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 KRTAP9-8Q9BYQ0 159 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 VSIRQ9H7M9 311 aa4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 KLK5Q9Y337 293 aaPredicted RBP4.16□□□□□ -1.74
CTNNA1-219ENST00000520158 IGHV3-35A0A0C4DH35 117 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 IGHV7-4-1A0A0J9YVY3 117 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 ZNF727A8MUV8 499 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 F8W1H4 67 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 IGKV1-39P01597 117 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 IGKV1D-39P04432 117 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 P0C879 139 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 IGLC6P0CF74 106 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 SLC25A6P12236 298 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 IFITM1P13164 125 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 RND3P61587 244 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 SEC11AP67812 179 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 PRCDQ00LT1 54 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 FOXI1Q12951 378 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 SERTAD4-AS1Q5TG53 156 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 LCN15Q6UWW0 184 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 HRCT1Q6UXD1 115 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 DPPA3Q6W0C5 159 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 OR4C16Q8NGL9 310 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 OR5H2Q8NGV7 314 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 NPIPB3Q92617 1050 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 TVP23CQ96ET8 276 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 RHPN1-AS1Q9BWJ2 59 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 PARLQ9H300 379 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 SELENOKQ9Y6D0 94 aa4.15□□□□□ -1.75
CTNNA1-219ENST00000520158 TMEM250H0YL14 139 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 LY6G6CO95867 125 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 RPL13AP40429 203 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 H2BFSP57053 126 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 Q0VG73 95 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 DEFB135Q30KP9 77 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 TTC32Q5I0X7 151 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 Q6ZRG5 221 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 Q8N976 141 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 ATP6V0E2Q8NHE4 81 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 PHLDA1Q8WV24 401 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 RASL10AQ92737 203 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 PLEKHB2Q96CS7 222 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 TMEM222Q9H0R3 208 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 C11orf68Q9H3H3 251 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 CYTL1Q9NRR1 136 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 NSG2Q9Y328 171 aa4.14□□□□□ -1.75
CTNNA1-219ENST00000520158 FAM236DA0A1B0GTK5 79 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 RBFOX3A6NFN3 312 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 GABARAPH6UMI1 98 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 CRXO43186 299 aaPredicted RBP4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 LINC00869P0C866 280 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 FAM236CP0DP71 79 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 ELK1P19419 428 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 ERHP84090 104 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 SLC38A11Q08AI6 406 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 PMCHL1Q16048 86 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 IZUMO4Q1ZYL8 232 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 Q56UQ5 140 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 Q5XG85 94 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 LHFPL1Q86WI0 220 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 C1orf158Q8N1D5 194 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 BORCS7Q96B45 105 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 KIR2DL4Q99706 377 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 RARRES2Q99969 163 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 SPANXDQ9BXN6 97 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 JPT2Q9H910 190 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 VPS13DQ5THJ4 4388 aa4.13□□□□□ -1.75
CTNNA1-219ENST00000520158 IGHV3OR16-8A0A075B7F1 116 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 IGHV3-21A0A0B4J1V1 117 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 TRAV5A0A0B4J249 113 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 MUC21A0A0G2JKD1 596 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 MUC21A0A140T8X8 626 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 GGTLC3B5MD39 225 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 DIRC3C9JPN6 131 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 IGKV1-5P01602 117 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 EIF4EP06730 217 aaKnown RBP4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 GIG44P09565 113 aaPredicted RBP4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 GATA1P15976 413 aaPredicted RBP4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 SUB1P53999 127 aaKnown RBP eCLIP4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 GAGE2BQ13066 116 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 GAGE2EQ4V326 116 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 PHLDA2Q53GA4 152 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 MPV17L2Q567V2 206 aa4.12□□□□□ -1.75
CTNNA1-219ENST00000520158 MUC21Q5SSG8 566 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms