RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 HRNRQ86YZ3 2850 aaPredicted RBP3.83□□□□□ -1.8
SDC2-204ENST00000519914 TRAV8-6A0A0B4J262 113 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 IGKV3D-20A0A0C4DH25 116 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 MUC21A0A0G2JKD1 596 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 IGHV7-4-1A0A0J9YVY3 117 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 MUC21A0A140T8X8 626 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 G3V318 75 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 NPYP01303 97 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 SMIM13P0DJ93 91 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 EVI2AP22794 236 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 CKS2P33552 79 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 CFHR3Q02985 330 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 MUC21Q5SSG8 566 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 LYRM7Q5U5X0 104 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 ZFAND6Q6FIF0 208 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 CLEC19AQ6UXS0 136 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 C2orf91Q6ZV80 131 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 GPHB5Q86YW7 130 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 POM121L12Q8N7R1 296 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 Q8TAT8 98 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 LINC00477Q96M19 166 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 PIMREGQ9BSJ6 248 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 TSSC4Q9Y5U2 329 aaPredicted RBP3.83□□□□□ -1.8
SDC2-204ENST00000519914 COL6A6A6NMZ7 2263 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 KALRNO60229 2985 aa3.83□□□□□ -1.8
SDC2-204ENST00000519914 NBASA2RRP1 2371 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 IGHV4-61A0A0C4DH41 118 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 hDV102S1A0JD36 115 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 TMEM89A2RUT3 159 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 LINC01548A6NM66 108 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 K7EMI3 77 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 OVOL1O14753 267 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 NCR2O95944 276 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 SPINK8P0C7L1 97 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 GATA3P23771 443 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 FCER1GP30273 86 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 LOXL1Q08397 574 aaPredicted RBP3.82□□□□□ -1.8
SDC2-204ENST00000519914 ERCC8Q13216 396 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 TWIST1Q15672 202 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 TMEM78Q5T7P6 136 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 Q6Q795 121 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 TEX29Q8N6K0 151 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 Q8N8P6 123 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 NRACQ8N912 160 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 MRAPQ8TCY5 172 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 NTN5Q8WTR8 489 aaPredicted RBP3.82□□□□□ -1.8
SDC2-204ENST00000519914 MAP1LC3AQ9H492 121 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 MAST4O15021 2626 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 IGF2RP11717 2491 aa3.82□□□□□ -1.8
SDC2-204ENST00000519914 CEP295Q9C0D2 2601 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 TMSB15BA0A087X1C1 80 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 TEX48A0A1B0GUV7 120 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 K7EMT4 169 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 M0R381 172 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 NXPH4O95158 308 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 TNFRSF6BO95407 300 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 ORM1P02763 201 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 CSN3P07498 182 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 GNLYP22749 145 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 UQCRFS1P47985 274 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 DSCR9P59020 149 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 SRSF1Q07955 248 aaKnown RBP eCLIP3.81□□□□□ -1.8
SDC2-204ENST00000519914 FAM106AQ4KMX7 169 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 ZFAND2AQ8N6M9 145 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 RNF152Q8N8N0 203 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 OR13C6PQ8NH95 151 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 NRGNQ92686 78 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 IFI27L1Q96BM0 104 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 ODF3Q96PU9 254 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 RELNP78509 3460 aa3.81□□□□□ -1.8
SDC2-204ENST00000519914 DCHS2Q6V1P9 2916 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 TRAV12-1A0A0B4J245 112 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 TRAV21A0A0B4J279 112 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 TRAV40A0A0B4J280 105 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 A1L4Q6 167 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 H3BMG7 143 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 H3BUT2 72 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 HOXA3O43365 443 aaPredicted RBP3.8□□□□□ -1.8
SDC2-204ENST00000519914 ATP5LO75964 103 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 TRGV3P03979 118 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 GYPEP15421 78 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 SLC25A16P16260 332 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 GCSHP23434 173 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 ASIPP42127 132 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 TAL2Q16559 108 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 TTC32Q5I0X7 151 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 RNF182Q8N6D2 247 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 C16orf92Q96LL3 132 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 BBC3Q96PG8 261 aaPredicted RBP3.8□□□□□ -1.8
SDC2-204ENST00000519914 CCL19Q99731 98 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 C20orf78Q9BR46 151 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 SPANXB1Q9NS25 103 aaPredicted RBP3.8□□□□□ -1.8
SDC2-204ENST00000519914 MSRB1Q9NZV6 116 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 HIGD1BQ9P298 99 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 SS18L2Q9UHA2 77 aa3.8□□□□□ -1.8
SDC2-204ENST00000519914 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.8□□□□□ -1.82e-7■■□□□ 11.4
SDC2-204ENST00000519914 A0A096LNT2 108 aa3.79□□□□□ -1.8
SDC2-204ENST00000519914 IGHV3-35A0A0C4DH35 117 aa3.79□□□□□ -1.8
SDC2-204ENST00000519914 LOC389332A0A1B0GUA5 103 aa3.79□□□□□ -1.8
SDC2-204ENST00000519914 A4D1N5 150 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms