RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 MDS2Q8NDY4 140 aa10.29□□□□□ -0.76
PABPC1-208ENST00000519004 SMCR5Q8TEV8 140 aa10.29□□□□□ -0.76
PABPC1-208ENST00000519004 CITED2Q99967 270 aaPredicted RBP10.29□□□□□ -0.76
PABPC1-208ENST00000519004 SPANXDQ9BXN6 97 aa10.29□□□□□ -0.76
PABPC1-208ENST00000519004 MSRB2Q9Y3D2 182 aa10.29□□□□□ -0.76
PABPC1-208ENST00000519004 IGLV3-9A0A075B6K5 115 aa10.28□□□□□ -0.76
PABPC1-208ENST00000519004 TRAV17A0A0B4J275 112 aa10.28□□□□□ -0.76
PABPC1-208ENST00000519004 COX7CP15954 63 aa10.28□□□□□ -0.76
PABPC1-208ENST00000519004 C2orf48Q96LS8 159 aa10.28□□□□□ -0.76
PABPC1-208ENST00000519004 ZGRF1Q86YA3 2104 aa10.28□□□□□ -0.76
PABPC1-208ENST00000519004 CDX4O14627 284 aaPredicted RBP10.28□□□□□ -0.76
PABPC1-208ENST00000519004 CRYGAP11844 174 aa10.28□□□□□ -0.76
PABPC1-208ENST00000519004 GAGE2AQ6NT46 116 aa10.28□□□□□ -0.76
PABPC1-208ENST00000519004 IGIPA6NJ69 53 aa10.27□□□□□ -0.76
PABPC1-208ENST00000519004 ATP5G1P05496 136 aa10.27□□□□□ -0.76
PABPC1-208ENST00000519004 SLC25A15Q9Y619 301 aa10.27□□□□□ -0.76
PABPC1-208ENST00000519004 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.76
PABPC1-208ENST00000519004 F8W735 103 aaPredicted RBP10.26□□□□□ -0.77
PABPC1-208ENST00000519004 DLX6P56179 175 aa10.26□□□□□ -0.77
PABPC1-208ENST00000519004 SPANXCQ9NY87 97 aa10.26□□□□□ -0.77
PABPC1-208ENST00000519004 IGHV1-69DA0A0B4J2H0 117 aa10.26□□□□□ -0.77
PABPC1-208ENST00000519004 F5H768 121 aa10.26□□□□□ -0.77
PABPC1-208ENST00000519004 UBE2E1P51965 193 aa10.26□□□□□ -0.77
PABPC1-208ENST00000519004 C9orf106Q8NAJ2 232 aa10.26□□□□□ -0.77
PABPC1-208ENST00000519004 CLEC2BQ92478 149 aa10.26□□□□□ -0.77
PABPC1-208ENST00000519004 TP53TG1Q9Y2A0 90 aa10.26□□□□□ -0.77
PABPC1-208ENST00000519004 M0R1B8 84 aa10.25□□□□□ -0.77
PABPC1-208ENST00000519004 OVOL1O14753 267 aa10.25□□□□□ -0.77
PABPC1-208ENST00000519004 RNF182Q8N6D2 247 aa10.25□□□□□ -0.77
PABPC1-208ENST00000519004 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
PABPC1-208ENST00000519004 CADP27708 2225 aa10.25□□□□□ -0.77
PABPC1-208ENST00000519004 LST1O00453 97 aa10.25□□□□□ -0.77
PABPC1-208ENST00000519004 ACYP1P07311 99 aa10.25□□□□□ -0.77
PABPC1-208ENST00000519004 CYSTM1Q9H1C7 97 aa10.25□□□□□ -0.77
PABPC1-208ENST00000519004 DCHS1Q96JQ0 3298 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 WDFY4Q6ZS81 3184 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 LEPROTO15243 131 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 SPRY2O43597 315 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 ZNF876PQ49A33 203 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 LINC00643Q86TS7 51 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 AHCTF1Q8WYP5 2266 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 IGHV1-3A0A0C4DH29 117 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 M0R381 172 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 OXTP01178 125 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 PRSS33Q8NF86 280 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 EEF1AKMT3Q96AZ1 226 aa10.24□□□□□ -0.77
PABPC1-208ENST00000519004 DSPP15924 2871 aaKnown RBP10.23□□□□□ -0.77
PABPC1-208ENST00000519004 IGHV1-8P0DP01 117 aa10.23□□□□□ -0.77
PABPC1-208ENST00000519004 DLX1P56177 255 aa10.23□□□□□ -0.77
PABPC1-208ENST00000519004 C5orf38Q86SI9 138 aa10.23□□□□□ -0.77
PABPC1-208ENST00000519004 GPHB5Q86YW7 130 aa10.23□□□□□ -0.77
PABPC1-208ENST00000519004 DPH3P1Q9H4G8 78 aa10.23□□□□□ -0.77
PABPC1-208ENST00000519004 MED13Q9UHV7 2174 aa10.23□□□□□ -0.77
PABPC1-208ENST00000519004 hADV29S1A0JD25 119 aa10.23□□□□□ -0.77
PABPC1-208ENST00000519004 MFAP4P55083 255 aa10.23□□□□□ -0.77
PABPC1-208ENST00000519004 RPL39P62891 51 aaKnown RBP10.23□□□□□ -0.77
PABPC1-208ENST00000519004 KIR2DL5BQ8NHK3 375 aa10.23□□□□□ -0.77
PABPC1-208ENST00000519004 ZNF256Q9Y2P7 627 aaPredicted RBP10.23□□□□□ -0.77
PABPC1-208ENST00000519004 MALRD1Q5VYJ5 2156 aa10.22□□□□□ -0.77
PABPC1-208ENST00000519004 TRAV41A0A0B4J266 112 aa10.22□□□□□ -0.77
PABPC1-208ENST00000519004 DPH3Q96FX2 82 aa10.22□□□□□ -0.77
PABPC1-208ENST00000519004 TMEM141Q96I45 108 aa10.22□□□□□ -0.77
PABPC1-208ENST00000519004 MGPP08493 103 aa10.22□□□□□ -0.77
PABPC1-208ENST00000519004 LOXP28300 417 aaPredicted RBP10.22□□□□□ -0.77
PABPC1-208ENST00000519004 PRB3Q04118 309 aaPredicted RBP10.22□□□□□ -0.77
PABPC1-208ENST00000519004 C4orf26Q17RF5 130 aa10.22□□□□□ -0.77
PABPC1-208ENST00000519004 LYPD2Q6UXB3 125 aa10.22□□□□□ -0.77
PABPC1-208ENST00000519004 SDIM1Q6ZPB5 146 aa10.22□□□□□ -0.77
PABPC1-208ENST00000519004 FANCD2OSQ96PS1 177 aa10.21□□□□□ -0.77
PABPC1-208ENST00000519004 TIMM17AQ99595 171 aa10.21□□□□□ -0.77
PABPC1-208ENST00000519004 A0A0J9YX75 114 aa10.21□□□□□ -0.78
PABPC1-208ENST00000519004 IGHV3-23P01764 117 aa10.21□□□□□ -0.78
PABPC1-208ENST00000519004 COX6CP09669 75 aa10.21□□□□□ -0.78
PABPC1-208ENST00000519004 CXCL5P42830 114 aa10.21□□□□□ -0.78
PABPC1-208ENST00000519004 HIST1H4AP62805 103 aaKnown RBP10.21□□□□□ -0.78
PABPC1-208ENST00000519004 DEFB104AQ8WTQ1 72 aa10.21□□□□□ -0.78
PABPC1-208ENST00000519004 ICE1Q9Y2F5 2266 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 IGLV11-55A0A075B6I3 123 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 IGHV3OR16-8A0A075B7F1 116 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 A0A0J9YXY3 114 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 SDHAF1A6NFY7 115 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 CCL8P80075 99 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 Q5XG85 94 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 Q6ZSV7 163 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 DCANP1Q8TF63 244 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 LITAFQ99732 161 aa10.2□□□□□ -0.78
PABPC1-208ENST00000519004 URB1O60287 2271 aaKnown RBP10.2□□□□□ -0.78
PABPC1-208ENST00000519004 IGHV3-64A0A075B6Q5 118 aa10.19□□□□□ -0.78
PABPC1-208ENST00000519004 PRR9Q5T870 116 aa10.19□□□□□ -0.78
PABPC1-208ENST00000519004 ZZEF1O43149 2961 aa10.19□□□□□ -0.78
PABPC1-208ENST00000519004 I3L3M4 83 aa10.19□□□□□ -0.78
PABPC1-208ENST00000519004 NDUFB3O43676 98 aa10.19□□□□□ -0.78
PABPC1-208ENST00000519004 IGLV1-47P01700 117 aa10.19□□□□□ -0.78
PABPC1-208ENST00000519004 TRACP01848 142 aa10.19□□□□□ -0.78
PABPC1-208ENST00000519004 TRAV8-3A0A0A6YYJ7 113 aa10.18□□□□□ -0.78
PABPC1-208ENST00000519004 HRCT1Q6UXD1 115 aa10.18□□□□□ -0.78
PABPC1-208ENST00000519004 ZNF580Q9UK33 172 aa10.18□□□□□ -0.78
PABPC1-208ENST00000519004 TMEM258P61165 79 aa10.18□□□□□ -0.78
PABPC1-208ENST00000519004 ZFHX4Q86UP3 3567 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms