RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 SSTP61278 116 aa11.05□□□□□ -0.64
TRAPPC9-205ENST00000518839 BAGE3Q86Y29 109 aa11.05□□□□□ -0.64
TRAPPC9-205ENST00000518839 SYT8Q8NBV8 401 aa11.05□□□□□ -0.64
TRAPPC9-205ENST00000518839 C9orf85Q96MD7 179 aa11.05□□□□□ -0.64
TRAPPC9-205ENST00000518839 CBY3A6NI87 242 aa11.04□□□□□ -0.64
TRAPPC9-205ENST00000518839 PPBPP02775 128 aa11.04□□□□□ -0.64
TRAPPC9-205ENST00000518839 AMN1Q8IY45 258 aa11.04□□□□□ -0.64
TRAPPC9-205ENST00000518839 Q8N1Y9 231 aa11.04□□□□□ -0.64
TRAPPC9-205ENST00000518839 TEP1Q99973 2627 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-205ENST00000518839 M0R381 172 aa11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 RBMY1A1P0DJD3 496 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 RBMY1CP0DJD4 496 aa11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 ZNF415Q09FC8 603 aa11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 RBMY1FQ15415 496 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 ORMDL3Q8N138 153 aa11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 HIST3H2BBQ8N257 126 aa11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 C18orf32Q8TCD1 76 aa11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 AP1S3Q96PC3 154 aa11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 LINC01587Q99440 93 aa11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 MSRB1Q9NZV6 116 aa11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 TP53TG3Q9ULZ0 132 aa11.03□□□□□ -0.64
TRAPPC9-205ENST00000518839 ESDP10768 282 aa11.02□□□□□ -0.65
TRAPPC9-205ENST00000518839 MRPL51Q4U2R6 128 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-205ENST00000518839 SPATA3Q8NHX4 192 aa11.02□□□□□ -0.65
TRAPPC9-205ENST00000518839 TMEM208Q9BTX3 173 aa11.02□□□□□ -0.65
TRAPPC9-205ENST00000518839 XCL2Q9UBD3 114 aa11.02□□□□□ -0.65
TRAPPC9-205ENST00000518839 LAMTOR2Q9Y2Q5 125 aa11.02□□□□□ -0.65
TRAPPC9-205ENST00000518839 GOLT1BQ9Y3E0 138 aa11.02□□□□□ -0.65
TRAPPC9-205ENST00000518839 U3KQK5 164 aa11.02□□□□□ -0.65
TRAPPC9-205ENST00000518839 IGLL1P15814 213 aa11.01□□□□□ -0.65
TRAPPC9-205ENST00000518839 RAB4AP20338 218 aa11.01□□□□□ -0.65
TRAPPC9-205ENST00000518839 CKS2P33552 79 aa11.01□□□□□ -0.65
TRAPPC9-205ENST00000518839 WFDC10AQ9H1F0 79 aa11.01□□□□□ -0.65
TRAPPC9-205ENST00000518839 DPH3P1Q9H4G8 78 aa11.01□□□□□ -0.65
TRAPPC9-205ENST00000518839 ZMAT5Q9UDW3 170 aaKnown RBP11.01□□□□□ -0.65
TRAPPC9-205ENST00000518839 RPL35AP18077 110 aaKnown RBP11□□□□□ -0.65
TRAPPC9-205ENST00000518839 EVI2AP22794 236 aa11□□□□□ -0.65
TRAPPC9-205ENST00000518839 PIK3CD-AS1Q5SR53 167 aa11□□□□□ -0.65
TRAPPC9-205ENST00000518839 DEFB125Q8N687 156 aa11□□□□□ -0.65
TRAPPC9-205ENST00000518839 PTH2Q96A98 100 aa11□□□□□ -0.65
TRAPPC9-205ENST00000518839 TMEM18Q96B42 140 aa11□□□□□ -0.65
TRAPPC9-205ENST00000518839 RNF185Q96GF1 192 aa11□□□□□ -0.65
TRAPPC9-205ENST00000518839 PRELID3AQ96N28 172 aa11□□□□□ -0.65
TRAPPC9-205ENST00000518839 MDFICQ9P1T7 246 aa11□□□□□ -0.65
TRAPPC9-205ENST00000518839 MUC4Q99102 2169 aa11□□□□□ -0.65
TRAPPC9-205ENST00000518839 ATRQ13535 2644 aa11□□□□□ -0.65
TRAPPC9-205ENST00000518839 D6R8Y8 96 aa10.99□□□□□ -0.65
TRAPPC9-205ENST00000518839 SERF1AO75920 110 aa10.99□□□□□ -0.65
TRAPPC9-205ENST00000518839 SMIM17P0DL12 118 aa10.99□□□□□ -0.65
TRAPPC9-205ENST00000518839 AKR1D1P51857 326 aa10.99□□□□□ -0.65
TRAPPC9-205ENST00000518839 PRR31Q5SQ13 230 aa10.99□□□□□ -0.65
TRAPPC9-205ENST00000518839 C1orf158Q8N1D5 194 aa10.99□□□□□ -0.65
TRAPPC9-205ENST00000518839 MRAP2Q96G30 205 aa10.99□□□□□ -0.65
TRAPPC9-205ENST00000518839 SPXQ9BT56 116 aa10.99□□□□□ -0.65
TRAPPC9-205ENST00000518839 HTN1P15515 57 aa10.98□□□□□ -0.65
TRAPPC9-205ENST00000518839 PDZD11Q5EBL8 140 aa10.98□□□□□ -0.65
TRAPPC9-205ENST00000518839 PACRGQ96M98 296 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-205ENST00000518839 NDUFAF3Q9BU61 184 aa10.98□□□□□ -0.65
TRAPPC9-205ENST00000518839 M0R2P5 195 aa10.97□□□□□ -0.65
TRAPPC9-205ENST00000518839 IQCJQ1A5X6 159 aa10.97□□□□□ -0.65
TRAPPC9-205ENST00000518839 CHCHD1Q96BP2 118 aaKnown RBP10.97□□□□□ -0.65
TRAPPC9-205ENST00000518839 RCHY1Q96PM5 261 aa10.97□□□□□ -0.65
TRAPPC9-205ENST00000518839 CSTL1Q9H114 145 aa10.97□□□□□ -0.65
TRAPPC9-205ENST00000518839 GSN-AS1Q9NRJ2 163 aa10.97□□□□□ -0.65
TRAPPC9-205ENST00000518839 PPP1R17O96001 155 aa10.96□□□□□ -0.65
TRAPPC9-205ENST00000518839 GIG44P09565 113 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC9-205ENST00000518839 FABP4P15090 132 aa10.96□□□□□ -0.65
TRAPPC9-205ENST00000518839 C14orf178Q8N769 122 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC9-205ENST00000518839 POM121L12Q8N7R1 296 aa10.96□□□□□ -0.65
TRAPPC9-205ENST00000518839 HIST1H2BLQ99880 126 aa10.96□□□□□ -0.65
TRAPPC9-205ENST00000518839 NIPBLQ6KC79 2804 aaeCLIP10.96□□□□□ -0.66
TRAPPC9-205ENST00000518839 KIR2DL5BA0A0G2JN68 375 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 KIR2DL5BA0A0G2JPC4 375 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 IFITM10A6NMD0 228 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 HSBP1O75506 76 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 LINC00310P59036 64 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 ZNF876PQ49A33 203 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 NIT1Q86X76 327 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 KIR2DL5AQ8N109 375 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 C11orf72Q8NBR9 251 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 KIR2DL5BQ8NHK3 375 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 TMEM263Q8WUH6 116 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 SAMD10Q9BYL1 202 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 MAP1LC3AQ9H492 121 aa10.95□□□□□ -0.66
TRAPPC9-205ENST00000518839 IGHV3OR16-12A0A075B7B8 117 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 A8MWV9 139 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 SPRY2O43597 315 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 NUPR1O60356 82 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 MGPP08493 103 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 LINC00614P0C842 121 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 PMCHP20382 165 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 APOC4P55056 127 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 RNASEKQ6P5S7 137 aaKnown RBP10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 FA2HQ7L5A8 372 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 CSNK1G2-AS1Q8NCQ2 148 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 PRSS3P2Q8NHM4 247 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 C16orf74Q96GX8 76 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 KIF25-AS1Q9Y6Z4 181 aa10.94□□□□□ -0.66
TRAPPC9-205ENST00000518839 SMKR1H3BMG3 65 aa10.93□□□□□ -0.66
TRAPPC9-205ENST00000518839 TNFRSF6BO95407 300 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms