RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PLIN4Q96Q06 1357 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 PTPRSQ13332 1948 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 ACACBO00763 2458 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 RIF1Q5UIP0 2472 aaKnown RBP1.97□□□□□ -2.09
VPS13B-207ENST00000518569 FRYQ5TBA9 3013 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 DOCK1Q14185 1865 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 UNC79Q9P2D8 2635 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 USP24Q9UPU5 2620 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 COL11A1P12107 1806 aaPredicted RBP1.97□□□□□ -2.09
VPS13B-207ENST00000518569 IGKV1D-17A0A075B6S4 117 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 IGKV1-12A0A0C4DH73 117 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 C3orf84H3BNL1 204 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 K7EP34 96 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 CREBL2O60519 120 aaPredicted RBP1.97□□□□□ -2.09
VPS13B-207ENST00000518569 EDF1O60869 148 aaKnown RBP1.97□□□□□ -2.09
VPS13B-207ENST00000518569 IGKV1D-12P01611 117 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF705BP0CI00 300 aaPredicted RBP1.97□□□□□ -2.09
VPS13B-207ENST00000518569 IGHV3-30-3P0DP02 117 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 CD28P10747 220 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 PIPP12273 146 aaPredicted RBP1.97□□□□□ -2.09
VPS13B-207ENST00000518569 HLA-DMBP28068 263 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 RNASE4P34096 147 aaKnown RBP1.97□□□□□ -2.09
VPS13B-207ENST00000518569 TSPEAR-AS2P59090 65 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 CIRBPQ14011 172 aaKnown RBP1.97□□□□□ -2.09
VPS13B-207ENST00000518569 ADIRFQ15847 76 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 RNASE13Q5GAN3 156 aaKnown RBP1.97□□□□□ -2.09
VPS13B-207ENST00000518569 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.97□□□□□ -2.09
VPS13B-207ENST00000518569 FAM104BQ5XKR9 115 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 OR5AS1Q8N127 324 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 OR2T35Q8NGX2 323 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 LINC01560Q8TB33 94 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 WFDC5Q8TCV5 224 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 FGF13Q92913 245 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 B9D2Q9BPU9 175 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 GABARAPL1Q9H0R8 117 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 BCL2L10Q9HD36 194 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 ASF1BQ9NVP2 202 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 TMEM242Q9NWH2 141 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 DNAJC15Q9Y5T4 150 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 MCM3APO60318 1980 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 BPTFQ12830 3046 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 NAV2Q8IVL1 2488 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 RALGAPA2Q2PPJ7 1873 aa1.97□□□□□ -2.09
VPS13B-207ENST00000518569 COL4A6Q14031 1691 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 SIP14410 1827 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 MAST4O15021 2626 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 TRBV24-1A0A075B6N3 115 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 IGHV1-3A0A0C4DH29 117 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 UBE2L5PA0A1B0GUS4 154 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 C17orf51A8MQB3 221 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 K7ERJ3 54 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 SLC25A20O43772 301 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 NDUFB6O95139 128 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 IGKV1-17P01599 117 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 IGHV1-69P01742 117 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 CD3DP04234 171 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 MSMBP08118 114 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 CKS2P33552 79 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 FUSP35637 526 aaKnown RBP eCLIP1.96□□□□□ -2.1
VPS13B-207ENST00000518569 KRTDAPP60985 99 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 GNGT1P63211 74 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 SEC11AP67812 179 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 UBE2L3P68036 154 aaKnown RBP1.96□□□□□ -2.1
VPS13B-207ENST00000518569 MIAQ16674 131 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 ZNF322Q6U7Q0 402 aaPredicted RBP1.96□□□□□ -2.1
VPS13B-207ENST00000518569 SPATA12Q7Z6I5 190 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 ZFAND2AQ8N6M9 145 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 C15orf53Q8NAA6 179 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 TSKUQ8WUA8 353 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 ITLN2Q8WWU7 325 aaPredicted RBP1.96□□□□□ -2.1
VPS13B-207ENST00000518569 SPTSSAQ969W0 71 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 MGST2Q99735 147 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 OR5V1Q9UGF6 321 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 LSM2Q9Y333 95 aaKnown RBP1.96□□□□□ -2.1
VPS13B-207ENST00000518569 LINC00312Q9Y6C7 94 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 S4R3C0 116 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 NCOR2Q9Y618 2525 aa1.96□□□□□ -2.1
VPS13B-207ENST00000518569 COL1A1P02452 1464 aaPredicted RBP1.95□□□□□ -2.1
VPS13B-207ENST00000518569 NUP210Q8TEM1 1887 aaPredicted RBP1.95□□□□□ -2.1
VPS13B-207ENST00000518569 DOCK5Q9H7D0 1870 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 C17orf112F2Z3M2 114 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 J3QLW9 94 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 M0R129 80 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 OR1I1O60431 355 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 SH2D1AO60880 128 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 IGHV1-46P01743 117 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 IL4P05112 153 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 COX6A1P12074 109 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 COX7CP15954 63 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 BLCAPP62952 87 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 KPRPQ5T749 579 aaPredicted RBP1.95□□□□□ -2.1
VPS13B-207ENST00000518569 ATP11AUNQ6ZP68 121 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 LYZL2Q7Z4W2 148 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 CNEP1R1Q8N9A8 125 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 VSTM2AQ8TAG5 236 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 ZNF431Q8TF32 576 aaPredicted RBP1.95□□□□□ -2.1
VPS13B-207ENST00000518569 RNASE6Q93091 150 aaKnown RBP1.95□□□□□ -2.1
VPS13B-207ENST00000518569 ZC2HC1AQ96GY0 325 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 REG4Q9BYZ8 158 aa1.95□□□□□ -2.1
VPS13B-207ENST00000518569 C11orf1Q9H5F2 150 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms