RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 HOXA5P20719 270 aa6.97□□□□□ -1.29
TPM3-222ENST00000515609 SRIP30626 198 aa6.97□□□□□ -1.29
TPM3-222ENST00000515609 CKS2P33552 79 aa6.97□□□□□ -1.29
TPM3-222ENST00000515609 SLAQ13239 276 aa6.97□□□□□ -1.29
TPM3-222ENST00000515609 OR10AG1Q8NH19 301 aa6.97□□□□□ -1.29
TPM3-222ENST00000515609 TMEM18Q96B42 140 aa6.97□□□□□ -1.29
TPM3-222ENST00000515609 DPH3P1Q9H4G8 78 aa6.97□□□□□ -1.29
TPM3-222ENST00000515609 C19orf73Q9NVV2 129 aa6.97□□□□□ -1.29
TPM3-222ENST00000515609 XCL2Q9UBD3 114 aa6.97□□□□□ -1.29
TPM3-222ENST00000515609 TIMM8BQ9Y5J9 83 aaPredicted RBP6.97□□□□□ -1.29
TPM3-222ENST00000515609 SMIM9A6NGZ8 99 aa6.96□□□□□ -1.3
TPM3-222ENST00000515609 M0R2P5 195 aa6.96□□□□□ -1.3
TPM3-222ENST00000515609 CRXO43186 299 aaPredicted RBP6.96□□□□□ -1.3
TPM3-222ENST00000515609 CIDEAO60543 219 aa6.96□□□□□ -1.3
TPM3-222ENST00000515609 RNASE3P12724 160 aaKnown RBP6.96□□□□□ -1.3
TPM3-222ENST00000515609 IGLL1P15814 213 aa6.96□□□□□ -1.3
TPM3-222ENST00000515609 PMCHP20382 165 aa6.96□□□□□ -1.3
TPM3-222ENST00000515609 SNRPEP62304 92 aaKnown RBP6.96□□□□□ -1.3
TPM3-222ENST00000515609 C9orf85Q96MD7 179 aa6.96□□□□□ -1.3
TPM3-222ENST00000515609 ALKBH7Q9BT30 221 aaPredicted RBP6.96□□□□□ -1.3
TPM3-222ENST00000515609 WNK1Q9H4A3 2382 aa6.96□□□□□ -1.3
TPM3-222ENST00000515609 JMJD1CQ15652 2540 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 RBMY1BA6NDE4 496 aaKnown RBP6.95□□□□□ -1.3
TPM3-222ENST00000515609 RBMY1EA6NEQ0 496 aaKnown RBP6.95□□□□□ -1.3
TPM3-222ENST00000515609 A8MWV9 139 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 H7C1H1 209 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 RHODO00212 210 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 RBMY1DP0C7P1 496 aaKnown RBP6.95□□□□□ -1.3
TPM3-222ENST00000515609 HTN1P15515 57 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 RAB4AP20338 218 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 FXYD7P58549 80 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 SSTP61278 116 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 KIR3DS1Q14943 382 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 ZNF124Q15973 351 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 TMEM263Q8WUH6 116 aaKnown RBP6.95□□□□□ -1.3
TPM3-222ENST00000515609 CHCHD1Q96BP2 118 aaKnown RBP6.95□□□□□ -1.3
TPM3-222ENST00000515609 C16orf74Q96GX8 76 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 PACRGQ96M98 296 aaPredicted RBP6.95□□□□□ -1.3
TPM3-222ENST00000515609 PRELID3AQ96N28 172 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 RCHY1Q96PM5 261 aa6.95□□□□□ -1.3
TPM3-222ENST00000515609 HSBP1O75506 76 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 ESDP10768 282 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 RPL35AP18077 110 aaKnown RBP6.94□□□□□ -1.3
TPM3-222ENST00000515609 G0S2P27469 103 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 RRN3P1Q2M238 152 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 LGALS9BQ3B8N2 356 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 KIAA1644Q3SXP7 199 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 ZNF876PQ49A33 203 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 ZNF575Q86XF7 245 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 AMN1Q8IY45 258 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 DEFB125Q8N687 156 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 PRSS3P2Q8NHM4 247 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 SAMD10Q9BYL1 202 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 MAP1LC3AQ9H492 121 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 NXT2Q9NPJ8 142 aaKnown RBP6.94□□□□□ -1.3
TPM3-222ENST00000515609 GSN-AS1Q9NRJ2 163 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 U3KQK5 164 aa6.94□□□□□ -1.3
TPM3-222ENST00000515609 MUC21A0A0G2JKD1 596 aa6.93□□□□□ -1.3
TPM3-222ENST00000515609 MUC21A0A140T8X8 626 aa6.93□□□□□ -1.3
TPM3-222ENST00000515609 K7EMI3 77 aa6.93□□□□□ -1.3
TPM3-222ENST00000515609 FRMD6-AS1P0C7T7 363 aa6.93□□□□□ -1.3
TPM3-222ENST00000515609 EVI2AP22794 236 aa6.93□□□□□ -1.3
TPM3-222ENST00000515609 EGFEM1PQ0D2K5 195 aa6.93□□□□□ -1.3
TPM3-222ENST00000515609 MRPL51Q4U2R6 128 aaKnown RBP6.93□□□□□ -1.3
TPM3-222ENST00000515609 FA2HQ7L5A8 372 aa6.93□□□□□ -1.3
TPM3-222ENST00000515609 C18orf32Q8TCD1 76 aa6.93□□□□□ -1.3
TPM3-222ENST00000515609 MDFICQ9P1T7 246 aa6.93□□□□□ -1.3
TPM3-222ENST00000515609 NIPBLQ6KC79 2804 aaeCLIP6.92□□□□□ -1.3
TPM3-222ENST00000515609 ANK3Q12955 4377 aaKnown RBP6.92□□□□□ -1.3
TPM3-222ENST00000515609 TEP1Q99973 2627 aaKnown RBP6.92□□□□□ -1.3
TPM3-222ENST00000515609 IGHV3OR16-12A0A075B7B8 117 aa6.92□□□□□ -1.3
TPM3-222ENST00000515609 LINC01549A6NIU2 74 aa6.92□□□□□ -1.3
TPM3-222ENST00000515609 D6R8Y8 96 aa6.92□□□□□ -1.3
TPM3-222ENST00000515609 TCAPO15273 167 aa6.92□□□□□ -1.3
TPM3-222ENST00000515609 LINC00614P0C842 121 aa6.92□□□□□ -1.3
TPM3-222ENST00000515609 DAZ2Q13117 558 aaKnown RBP6.92□□□□□ -1.3
TPM3-222ENST00000515609 ZNF705AQ6ZN79 300 aaPredicted RBP6.92□□□□□ -1.3
TPM3-222ENST00000515609 C1orf158Q8N1D5 194 aa6.92□□□□□ -1.3
TPM3-222ENST00000515609 C20orf78Q9BR46 151 aa6.92□□□□□ -1.3
TPM3-222ENST00000515609 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
TPM3-222ENST00000515609 MSRB1Q9NZV6 116 aa6.92□□□□□ -1.3
TPM3-222ENST00000515609 LOC105371267A0A1B0GV96 52 aa6.91□□□□□ -1.3
TPM3-222ENST00000515609 A8MZ25 164 aa6.91□□□□□ -1.3
TPM3-222ENST00000515609 F5H697 171 aa6.91□□□□□ -1.3
TPM3-222ENST00000515609 AKR1D1P51857 326 aa6.91□□□□□ -1.3
TPM3-222ENST00000515609 ZFP2Q6ZN57 461 aa6.91□□□□□ -1.3
TPM3-222ENST00000515609 Q6ZQT7 251 aa6.91□□□□□ -1.3
TPM3-222ENST00000515609 Q6ZWC4 215 aa6.91□□□□□ -1.3
TPM3-222ENST00000515609 HIST3H2BBQ8N257 126 aa6.91□□□□□ -1.3
TPM3-222ENST00000515609 C14orf178Q8N769 122 aaPredicted RBP6.91□□□□□ -1.3
TPM3-222ENST00000515609 RASL10AQ92737 203 aa6.91□□□□□ -1.3
TPM3-222ENST00000515609 TEX48A0A1B0GUV7 120 aa6.9□□□□□ -1.3
TPM3-222ENST00000515609 PRSS47A8MTI9 375 aa6.9□□□□□ -1.3
TPM3-222ENST00000515609 SERF1AO75920 110 aa6.9□□□□□ -1.3
TPM3-222ENST00000515609 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
TPM3-222ENST00000515609 MGPP08493 103 aa6.9□□□□□ -1.3
TPM3-222ENST00000515609 RBMY1A1P0DJD3 496 aaKnown RBP6.9□□□□□ -1.3
TPM3-222ENST00000515609 RBMY1CP0DJD4 496 aa6.9□□□□□ -1.3
TPM3-222ENST00000515609 RIPPLY3P57055 190 aa6.9□□□□□ -1.3
TPM3-222ENST00000515609 RBMY1FQ15415 496 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms