RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 IL17DQ8TAD2 202 aa12.88□□□□□ -0.35
NME1-210ENST00000512768 PGLYRP4Q96LB8 373 aa12.88□□□□□ -0.35
NME1-210ENST00000512768 SPXQ9BT56 116 aa12.88□□□□□ -0.35
NME1-210ENST00000512768 SSBP4Q9BWG4 385 aaPredicted RBP12.88□□□□□ -0.35
NME1-210ENST00000512768 SCRT2Q9NQ03 307 aa12.88□□□□□ -0.35
NME1-210ENST00000512768 TMEM242Q9NWH2 141 aa12.88□□□□□ -0.35
NME1-210ENST00000512768 MUC21A0A0G2JKD1 596 aa12.87□□□□□ -0.35
NME1-210ENST00000512768 MUC21A0A140T8X8 626 aa12.87□□□□□ -0.35
NME1-210ENST00000512768 SNAI2O43623 268 aa12.87□□□□□ -0.35
NME1-210ENST00000512768 OR5AL1P0C617 328 aa12.87□□□□□ -0.35
NME1-210ENST00000512768 NHLRC4P0CG21 123 aaPredicted RBP12.87□□□□□ -0.35
NME1-210ENST00000512768 CTRLP40313 264 aa12.87□□□□□ -0.35
NME1-210ENST00000512768 NOP10Q9NPE3 64 aaKnown RBP12.87□□□□□ -0.35
NME1-210ENST00000512768 NAT8BQ9UHF3 227 aa12.87□□□□□ -0.35
NME1-210ENST00000512768 PHLDA3Q9Y5J5 127 aa12.87□□□□□ -0.35
NME1-210ENST00000512768 MUC4Q99102 2169 aa12.87□□□□□ -0.35
NME1-210ENST00000512768 F2Z2F3 143 aa12.86□□□□□ -0.35
NME1-210ENST00000512768 FOXA3P55318 350 aaPredicted RBP12.86□□□□□ -0.35
NME1-210ENST00000512768 SSTP61278 116 aa12.86□□□□□ -0.35
NME1-210ENST00000512768 DAZ2Q13117 558 aaKnown RBP12.86□□□□□ -0.35
NME1-210ENST00000512768 NUP35Q8NFH5 326 aa12.86□□□□□ -0.35
NME1-210ENST00000512768 OR10AG1Q8NH19 301 aa12.86□□□□□ -0.35
NME1-210ENST00000512768 IMMP2LQ96T52 175 aa12.86□□□□□ -0.35
NME1-210ENST00000512768 M0R2P5 195 aa12.85□□□□□ -0.35
NME1-210ENST00000512768 FAM3BP58499 235 aaPredicted RBP12.85□□□□□ -0.35
NME1-210ENST00000512768 COL7A1Q02388 2944 aa12.85□□□□□ -0.35
NME1-210ENST00000512768 FBN3Q75N90 2809 aa12.84□□□□□ -0.35
NME1-210ENST00000512768 M0R381 172 aa12.84□□□□□ -0.35
NME1-210ENST00000512768 SPINK4O60575 86 aa12.84□□□□□ -0.35
NME1-210ENST00000512768 SPANXN1Q5VSR9 72 aa12.84□□□□□ -0.35
NME1-210ENST00000512768 KCNIP4Q6PIL6 250 aa12.84□□□□□ -0.35
NME1-210ENST00000512768 BORCS7Q96B45 105 aa12.84□□□□□ -0.35
NME1-210ENST00000512768 C11orf68Q9H3H3 251 aaKnown RBP12.84□□□□□ -0.35
NME1-210ENST00000512768 MRPL16Q9NX20 251 aaKnown RBP12.84□□□□□ -0.35
NME1-210ENST00000512768 TRGV1A0A0A0MS02 117 aa12.83□□□□□ -0.36
NME1-210ENST00000512768 A0A0J9YWU9 116 aa12.83□□□□□ -0.36
NME1-210ENST00000512768 S100PP25815 95 aa12.83□□□□□ -0.36
NME1-210ENST00000512768 CACNG7P62955 275 aa12.83□□□□□ -0.36
NME1-210ENST00000512768 ZFP82Q8N141 532 aa12.83□□□□□ -0.36
NME1-210ENST00000512768 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
NME1-210ENST00000512768 URGCP-MRPS24S4R325 110 aa12.83□□□□□ -0.36
NME1-210ENST00000512768 A0A1B0GUT8 65 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 CXorf65A6NEN9 183 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 LYRM9A8MSI8 78 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 ZNF876PQ49A33 203 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 FAM222AQ5U5X8 452 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 DMRTA1Q5VZB9 504 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 WDR73Q6P4I2 378 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 Q6ZTI0 123 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 PTH2Q96A98 100 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 CNFNQ9BYD5 112 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 DKK2Q9UBU2 259 aa12.82□□□□□ -0.36
NME1-210ENST00000512768 NXPH4O95158 308 aa12.81□□□□□ -0.36
NME1-210ENST00000512768 LGALS9BQ3B8N2 356 aa12.81□□□□□ -0.36
NME1-210ENST00000512768 TMEM88Q6PEY1 159 aa12.81□□□□□ -0.36
NME1-210ENST00000512768 CBLN2Q8IUK8 224 aa12.81□□□□□ -0.36
NME1-210ENST00000512768 SMCO4Q9NRQ5 59 aa12.81□□□□□ -0.36
NME1-210ENST00000512768 CELA1Q9UNI1 258 aa12.81□□□□□ -0.36
NME1-210ENST00000512768 IGHV4-4A0A075B6R2 117 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 GAGE12BA1L429 117 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 SCO1O75880 301 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 GAGE7O76087 117 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 GAGE12FP0CL80 117 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 GAGE12GP0CL81 117 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 GAGE12IP0CL82 117 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 SPART-AS1P0CW21 52 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 NTF3P20783 257 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 RIGQ13278 110 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 TWIST1Q15672 202 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 RASL10AQ92737 203 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 BTF3L4Q96K17 158 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
NME1-210ENST00000512768 DEFB130BP0DP73 79 aa12.79□□□□□ -0.36
NME1-210ENST00000512768 DEFB130AP0DP74 79 aa12.79□□□□□ -0.36
NME1-210ENST00000512768 MRPL54Q6P161 138 aaKnown RBP12.79□□□□□ -0.36
NME1-210ENST00000512768 TRAV9-1A0A075B6T8 112 aa12.78□□□□□ -0.36
NME1-210ENST00000512768 TEX48A0A1B0GUV7 120 aa12.78□□□□□ -0.36
NME1-210ENST00000512768 PIK3CD-AS1Q5SR53 167 aa12.78□□□□□ -0.36
NME1-210ENST00000512768 LINC00612Q8N6U2 182 aa12.78□□□□□ -0.36
NME1-210ENST00000512768 U3KQK5 164 aa12.78□□□□□ -0.36
NME1-210ENST00000512768 TRGV2A0A075B6R0 118 aa12.77□□□□□ -0.37
NME1-210ENST00000512768 DAD1P61803 113 aa12.77□□□□□ -0.37
NME1-210ENST00000512768 ELOBQ15370 118 aa12.77□□□□□ -0.37
NME1-210ENST00000512768 NDUFAF3Q9BU61 184 aa12.77□□□□□ -0.37
NME1-210ENST00000512768 JPT2Q9H910 190 aa12.77□□□□□ -0.37
NME1-210ENST00000512768 STAB2Q8WWQ8 2551 aa12.76□□□□□ -0.37
NME1-210ENST00000512768 A0A1B0GXF2 115 aa12.76□□□□□ -0.37
NME1-210ENST00000512768 CAMPP49913 170 aa12.76□□□□□ -0.37
NME1-210ENST00000512768 ATP5L2Q7Z4Y8 100 aa12.76□□□□□ -0.37
NME1-210ENST00000512768 AP1S3Q96PC3 154 aa12.76□□□□□ -0.37
NME1-210ENST00000512768 TGIF2-C20orf24A0A0A6YYL0 155 aa12.75□□□□□ -0.37
NME1-210ENST00000512768 A0A1B0GW15 77 aa12.75□□□□□ -0.37
NME1-210ENST00000512768 A8MWV9 139 aa12.75□□□□□ -0.37
NME1-210ENST00000512768 RS1O15537 224 aa12.75□□□□□ -0.37
NME1-210ENST00000512768 TRGC1P0CF51 173 aa12.75□□□□□ -0.37
NME1-210ENST00000512768 HBBP68871 147 aa12.75□□□□□ -0.37
NME1-210ENST00000512768 YPEL4Q96NS1 127 aa12.75□□□□□ -0.37
NME1-210ENST00000512768 A0A087WWL8 130 aa12.74□□□□□ -0.37
NME1-210ENST00000512768 S100A8P05109 93 aa12.74□□□□□ -0.37
NME1-210ENST00000512768 CFAP126Q5VTH2 177 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms