RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 IFI27P40305 119 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 UBE2E1P51965 193 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 SUB1P53999 127 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 ERCC8Q13216 396 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 RIGQ13278 110 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 FXYD3Q14802 87 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 SPANXN5Q5MJ07 72 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 C2orf82Q6UX34 121 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZFP2Q6ZN57 461 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 NDUFA11Q86Y39 141 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 DEFB124Q8NES8 71 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 SRSF12Q8WXF0 261 aaKnown RBP3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 UBE2E2Q96LR5 201 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 METTL26Q96S19 204 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 DEFB126Q9BYW3 111 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 C16orf95Q9H693 158 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZNF492Q9P255 531 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 GON4LQ3T8J9 2241 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 ATG2BQ96BY7 2078 aa3.45□□□□□ -1.86
HMGB3P13-201ENST00000511263 PLXNB3Q9ULL4 1909 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 SCN3AQ9NY46 2000 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 CDH23Q9H251 3354 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 KIAA1549Q9HCM3 1950 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 UBE2L6O14933 153 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 MRPS12O15235 138 aaKnown RBP3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 LTAP01374 205 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 INAFM2P0DMQ5 153 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 MYCNOSP40205 109 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 DAD1P61803 113 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 SNRPD3P62318 126 aaKnown RBP3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 SDIM1Q6ZPB5 146 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 MDP1Q86V88 176 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZCCHC24Q8N2G6 241 aaKnown RBP3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 DAND5Q8N907 189 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 RPP21Q9H633 154 aaKnown RBP3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 PRO1854Q9UHT4 67 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 SZT2Q5T011 3432 aa3.44□□□□□ -1.86
HMGB3P13-201ENST00000511263 PTPRBP23467 1997 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 XIRP2A4UGR9 3374 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 CACNA1EQ15878 2313 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 KNL1Q8NG31 2342 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 CABIN1Q9Y6J0 2220 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZDBF2Q9HCK1 2354 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 COL5A1P20908 1838 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGLV3-32A0A0A0MS00 114 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGHV1-45A0A0A0MS14 117 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1BA6NDE4 496 aaKnown RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1EA6NEQ0 496 aaKnown RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 SMKR1H3BMG3 65 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 SS18L1O75177 396 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1DP0C7P1 496 aaKnown RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1A1P0DJD3 496 aaKnown RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1CP0DJD4 496 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZNF823P16415 610 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 SAA4P35542 130 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 RBMY1FQ15415 496 aaKnown RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 ECSCRQ19T08 205 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 S100A7L2Q5SY68 101 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 ATP5EP2Q5VTU8 51 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGFL3Q6UXB1 125 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 LY6G5BQ8NDX9 201 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 C1orf147Q96MC9 270 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 NABP2Q9BQ15 211 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 NCOA6Q14686 2063 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 DOCK11Q5JSL3 2073 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 THADAQ6YHU6 1953 aa3.43□□□□□ -1.86
HMGB3P13-201ENST00000511263 MDC1Q14676 2089 aaKnown RBP3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 KNTC1P50748 2209 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TRAV3A0A0B4J244 114 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TRBV30A0A0K0K1B3 111 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TEX49A0A1B0GTD5 131 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 PCNX2A6NKB5 2137 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 C4orf51C9J302 202 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 INS-IGF2F8WCM5 200 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 CCL21O00585 134 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 SOCS3O14543 225 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TIMM17BO60830 172 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 IAPPP10997 89 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 SLC25A16P16260 332 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 CCL1P22362 96 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 DEFB110Q30KQ9 67 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 GDF5OSQ5U4N7 250 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 MIC13Q5XKP0 118 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 Q6JHZ5 121 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 CEMP1Q6PRD7 247 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 UBALD1Q8TB05 177 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 DEFB127Q9H1M4 99 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 ZNF355PQ9NSJ1 428 aa3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TIMM8BQ9Y5J9 83 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P13-201ENST00000511263 TTC28Q96AY4 2481 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 TRBV27A0A0K0K1C4 114 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 A0A1B0GUT8 65 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 EFNA2O43921 213 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 IGLV2-8P01709 118 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 CKS2P33552 79 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 TFF3Q07654 80 aa3.41□□□□□ -1.86
HMGB3P13-201ENST00000511263 ATP1A1-AS1Q5TC04 95 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms