RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 OR5AL1P0C617 328 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 TCL1AP56279 114 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 HIST1H1AQ02539 215 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 PDZD11Q5EBL8 140 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 MRPL54Q6P161 138 aaKnown RBP4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 TMEM256Q8N2U0 113 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 SIGLECL1Q8N7X8 197 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 C18orf32Q8TCD1 76 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 CHCHD1Q96BP2 118 aaKnown RBP4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 ZC2HC1AQ96GY0 325 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 CNFNQ9BYD5 112 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 SAMD10Q9BYL1 202 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 RPH3ALQ9UNE2 315 aa4.94□□□□□ -1.62
TRAPPC11-206ENST00000509857 PCP4L1A6NKN8 68 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 FABP5P3A8MUU1 101 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 F2Z2F3 143 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 H3BUX3 64 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 IGHG4P01861 327 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 TRGV3P03979 118 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 SRIP30626 198 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 CTRLP40313 264 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 SLAQ13239 276 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 LCN12Q6JVE5 192 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 CLEC19AQ6UXS0 136 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 LINC00322Q6ZN03 302 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 TEX43Q6ZNM6 134 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 GTSF1Q8WW33 167 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 LAMTOR2Q9Y2Q5 125 aa4.93□□□□□ -1.62
TRAPPC11-206ENST00000509857 ZZEF1O43149 2961 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 KALRNO60229 2985 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 LOC102724200A0A096LPH7 203 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 TRAV8-1A0A0A6YYK1 113 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 KIR2DL5BA0A0G2JN68 375 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 KIR2DL5BA0A0G2JPC4 375 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 FAM168BA1KXE4 195 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 C20orf202A1L168 122 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 GRIFINA4D1Z8 144 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 TMEM189A5PLL7 270 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 G3V318 75 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 M0R3E3 92 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 CA1P00915 261 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 PPBPP02775 128 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 PMCHL1Q16048 86 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 TCF24Q7RTU0 167 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 GPHB5Q86YW7 130 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 KIR2DL5AQ8N109 375 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 LINC00477Q96M19 166 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 NAGKQ9UJ70 344 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 KIF25-AS1Q9Y6Z4 181 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 CSPG4Q6UVK1 2322 aa4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 USP9XQ93008 2570 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-206ENST00000509857 SMG1Q96Q15 3661 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 IGHV3OR16-12A0A075B7B8 117 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 LINC00587B1AMM8 73 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 H3BTX0 84 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 OVOL1O14753 267 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 SH2D1AO60880 128 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 HSBP1O75506 76 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 SNRPCP09234 159 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 IGLC6P0CF74 106 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 PSMB8P28062 276 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 DDTP30046 118 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 CRIP1P50238 77 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 ZNF138P52744 262 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 DEFA6Q01524 100 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 DEFB113Q30KQ7 82 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 TMEM78Q5T7P6 136 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 GDF5OSQ5U4N7 250 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 BRD3OSQ6XYD6 125 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 TMEM86BQ8N661 226 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 PGLYRP4Q96LB8 373 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 C20orf144Q9BQM9 153 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 DAZ1Q9NQZ3 744 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 S4R3C0 116 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 U3KQK5 164 aa4.91□□□□□ -1.62
TRAPPC11-206ENST00000509857 FAM208BQ5VWN6 2430 aa4.9□□□□□ -1.62
TRAPPC11-206ENST00000509857 CREBBPQ92793 2442 aa4.9□□□□□ -1.62
TRAPPC11-206ENST00000509857 CRXO43186 299 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 NUPR1O60356 82 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 SPINK4O60575 86 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 IGHV3-23P01764 117 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 GIG44P09565 113 aaPredicted RBP4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 SLC35B1P78383 322 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 PSMG4Q5JS54 123 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 LCE3EQ5T5B0 92 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 FAM104BQ5XKR9 115 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 APRG1Q8IVJ8 170 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 ZNF664Q8N3J9 261 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 DEFB125Q8N687 156 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 FER1L6-AS1Q8NA97 138 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 MYOZ3Q8TDC0 251 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 ODF3Q96PU9 254 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 NDUFAF3Q9BU61 184 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 TMEM191AQ9H0A3 160 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 NRN1Q9NPD7 142 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 VPREB3Q9UKI3 123 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 UFC1Q9Y3C8 167 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 ITPR1Q14643 2758 aa4.9□□□□□ -1.63
TRAPPC11-206ENST00000509857 IGSF10Q6WRI0 2623 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms