RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 OR11H2Q8NH07 326 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 KCNS1Q96KK3 526 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 RARRES2Q99969 163 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 OVOL2Q9BRP0 275 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 TMEM208Q9BTX3 173 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 LY96Q9Y6Y9 160 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 TGP01266 2768 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 TENM3Q9P273 2699 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 TRAV8-1A0A0A6YYK1 113 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 TRAV34A0A0B4J273 112 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 C9JCJ5 164 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 ZNF324O75467 553 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 PFN1P07737 140 aaKnown RBP3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 RNASE4P34096 147 aaKnown RBP3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 RPL35P42766 123 aaKnown RBP3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 FXYD7P58549 80 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 RRN3P1Q2M238 152 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 TDRG1Q3Y452 100 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 GFI1BQ5VTD9 330 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 UQCC3Q6UW78 93 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 Q86TA4 180 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 BAGE2Q86Y30 109 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 C1orf158Q8N1D5 194 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 LINC01587Q99440 93 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 C11orf68Q9H3H3 251 aaKnown RBP3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 TP53TG3Q9ULZ0 132 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 U3KQK5 164 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 COL7A1Q02388 2944 aa3.95□□□□□ -1.78
HMGB1P44-201ENST00000508597 DNAH9Q9NYC9 4486 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 TRAV12-2A0A075B6T6 113 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 IGHV1OR15-1A0A075B7D0 117 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 TRAV12-3A0A0B4J271 114 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 GCGP01275 180 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 SRP19P09132 144 aaKnown RBP3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 GNG4P50150 75 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 SNRPEP62304 92 aaKnown RBP3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 UBE2V1Q13404 147 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 ZNF674Q2M3X9 581 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 IBA57Q5T440 356 aaKnown RBP3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 FAM162BQ5T6X4 162 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 FAM159AQ6UWV7 190 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 EIF4E3Q8N5X7 224 aaKnown RBP3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 Q8TAT8 98 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 TMEM263Q8WUH6 116 aaKnown RBP3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 TVP23CQ96ET8 276 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 C16orf74Q96GX8 76 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 LINC00479Q96M42 142 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 PARLQ9H300 379 aa3.94□□□□□ -1.78
HMGB1P44-201ENST00000508597 DNAH7Q8WXX0 4024 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 LINC00862A6NCI5 91 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 ZNF727A8MUV8 499 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 CXCL1P09341 107 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 BTN1A1Q13410 526 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 CENPWQ5EE01 88 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 SOHLH1Q5JUK2 328 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 DNLZQ5SXM8 178 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 Q8NAQ8 132 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 PCNPQ8WW12 178 aaKnown RBP3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 ZC2HC1AQ96GY0 325 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 SGK494Q96LW2 274 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 SMIM7Q9BQ49 75 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 SPXQ9BT56 116 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 NDUFAF3Q9BU61 184 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 KRTAP1-5Q9BYS1 174 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 SDF2L1Q9HCN8 221 aa3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 TIMM8BQ9Y5J9 83 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P44-201ENST00000508597 IGHV3OR16-12A0A075B7B8 117 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 XKRY2A2RUG3 117 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 LYRM9A8MSI8 78 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 SNURFLB1AK76 121 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 SPART-AS1P0CW21 52 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 RBMY1A1P0DJD3 496 aaKnown RBP3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 RBMY1CP0DJD4 496 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 PRB4P10163 310 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 ZNF80P51504 273 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 RPS20P60866 119 aaKnown RBP3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 ZNF415Q09FC8 603 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 DAZ2Q13117 558 aaKnown RBP3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 RBMY1FQ15415 496 aaKnown RBP3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 TMEM241Q24JQ0 296 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 LGALS9BQ3B8N2 356 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 PRR9Q5T870 116 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 FAM231DQ6ZW35 169 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 RNASE8Q8TDE3 154 aaKnown RBP3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 PTH2Q96A98 100 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 DERL1Q9BUN8 251 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 NAT8Q9UHE5 227 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 HUWE1Q7Z6Z7 4374 aaKnown RBP3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 MUC4Q99102 2169 aa3.92□□□□□ -1.78
HMGB1P44-201ENST00000508597 TRBV20OR9-2A0A075B6H5 130 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 C19orf71A6NCJ1 209 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 ZNF705GA8MUZ8 300 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 B4DEV8 164 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 CIDEAO60543 219 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 SH2D1AO60880 128 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 IGLV2-8P01709 118 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 P01737 135 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 ORM1P02763 201 aa3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 MGST1P10620 155 aaKnown RBP3.91□□□□□ -1.78
HMGB1P44-201ENST00000508597 CRIP1P50238 77 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms