RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 PDE6DO43924 150 aa6.4□□□□□ -1.38
UBE2D3-223ENST00000508249 CCL18P55774 89 aa6.4□□□□□ -1.38
UBE2D3-223ENST00000508249 OR5I1Q13606 314 aa6.4□□□□□ -1.38
UBE2D3-223ENST00000508249 FAM162BQ5T6X4 162 aa6.4□□□□□ -1.38
UBE2D3-223ENST00000508249 C11orf52Q96A22 123 aa6.4□□□□□ -1.38
UBE2D3-223ENST00000508249 SMIM12Q96EX1 92 aa6.4□□□□□ -1.38
UBE2D3-223ENST00000508249 C8orf49Q96NF6 230 aa6.4□□□□□ -1.38
UBE2D3-223ENST00000508249 MDFICQ9P1T7 246 aa6.4□□□□□ -1.38
UBE2D3-223ENST00000508249 PRO0255Q9UI72 69 aa6.4□□□□□ -1.38
UBE2D3-223ENST00000508249 TRAV26-1A0A087WT03 109 aa6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 A0A1B0GV50 99 aa6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 NUDT3O95989 172 aa6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 CXCL1P09341 107 aa6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 S100A4P26447 101 aaKnown RBP6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 ASIPP42127 132 aa6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 ZNF80P51504 273 aaPredicted RBP6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 XGP55808 180 aa6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 DNLZQ5SXM8 178 aa6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 Q6ZQT7 251 aa6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 LINC00479Q96M42 142 aa6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 MRPL16Q9NX20 251 aaKnown RBP6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 GNG13Q9P2W3 67 aa6.39□□□□□ -1.39
UBE2D3-223ENST00000508249 SCO2A0A1W2PP80 73 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 GNRH2O43555 120 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 NDUFS6O75380 124 aaKnown RBP6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 ORM1P02763 201 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 BCL2P10415 239 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 HOXA5P20719 270 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 MEF2BQ02080 365 aaPredicted RBP6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 ZNF674Q2M3X9 581 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 LINC01559Q495D7 138 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 Q5VSD8 79 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 BAGE2Q86Y30 109 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 C6orf223Q8N319 242 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 OR4C5Q8NGB2 326 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 C9orf85Q96MD7 179 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 KRTAP1-5Q9BYS1 174 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 BIN3Q9NQY0 253 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 IL36BQ9NZH7 164 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 VAX2Q9UIW0 290 aa6.38□□□□□ -1.39
UBE2D3-223ENST00000508249 IGKV3D-20A0A0C4DH25 116 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 TRGV4A0A0C4DH28 118 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 NBDYA0A0U1RRE5 68 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 B4DEV8 164 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 PAX4O43316 350 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 SH2D1AO60880 128 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 ZNF876PQ49A33 203 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 SH2D6Q7Z4S9 175 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 SYT8Q8NBV8 401 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 ZNRF2Q8NHG8 242 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 PCNPQ8WW12 178 aaKnown RBP6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 ZC2HC1AQ96GY0 325 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 MLST8Q9BVC4 326 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 C11orf21Q9P2W6 132 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 HHLA3Q9XRX5 114 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 ICOSQ9Y6W8 199 aa6.37□□□□□ -1.39
UBE2D3-223ENST00000508249 A8MWV9 139 aa6.36□□□□□ -1.39
UBE2D3-223ENST00000508249 C9JCJ5 164 aa6.36□□□□□ -1.39
UBE2D3-223ENST00000508249 RPL35P42766 123 aaKnown RBP6.36□□□□□ -1.39
UBE2D3-223ENST00000508249 CRYBA4P53673 196 aa6.36□□□□□ -1.39
UBE2D3-223ENST00000508249 CCL20P78556 96 aa6.36□□□□□ -1.39
UBE2D3-223ENST00000508249 FHL2Q14192 279 aa6.36□□□□□ -1.39
UBE2D3-223ENST00000508249 MRPL23Q16540 153 aaKnown RBP6.36□□□□□ -1.39
UBE2D3-223ENST00000508249 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
UBE2D3-223ENST00000508249 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
UBE2D3-223ENST00000508249 A0A0J9YY99 117 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 A0A1B0GVG6 124 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 KRBOX1C9JBD0 128 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 TMEM250H0YL14 139 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 RHODO00212 210 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 RS1O15537 224 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 IGHV3-53P01767 116 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 RNASE3P12724 160 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 BTF3P20290 206 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 CRIP1P50238 77 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 RHOHQ15669 191 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 TTC32Q5I0X7 151 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 ALKAL2Q6UX46 152 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 ZFP2Q6ZN57 461 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 LYPD6BQ8NI32 183 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 VSIG2Q96IQ7 327 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 MED9Q9NWA0 146 aa6.35□□□□□ -1.39
UBE2D3-223ENST00000508249 A0A096LPF7 62 aa6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 A0A1W2PPQ1 181 aa6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 XKRY2A2RUG3 117 aa6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 MGST1P10620 155 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 GATA1P15976 413 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 SRIP30626 198 aa6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 GNG4P50150 75 aa6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 RPS20P60866 119 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 ZNF506Q5JVG8 444 aa6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 ZFP82Q8N141 532 aa6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 DAZAP1Q96EP5 407 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 ZNF479Q96JC4 524 aa6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 PRADC1Q9BSG0 188 aa6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 MRPS16Q9Y3D3 137 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-223ENST00000508249 PHLDA3Q9Y5J5 127 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms