RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 SCGB2A2Q13296 93 aa10.16□□□□□ -0.78
SNCAIP-209ENST00000508017 CLEC2AQ6UVW9 174 aa10.16□□□□□ -0.78
SNCAIP-209ENST00000508017 C9orf139Q6ZV77 190 aa10.16□□□□□ -0.78
SNCAIP-209ENST00000508017 SPOCK3Q9BQ16 436 aa10.16□□□□□ -0.78
SNCAIP-209ENST00000508017 MRPL16Q9NX20 251 aaKnown RBP10.16□□□□□ -0.78
SNCAIP-209ENST00000508017 MUC6Q6W4X9 2439 aa10.16□□□□□ -0.78
SNCAIP-209ENST00000508017 LINC01549A6NIU2 74 aa10.15□□□□□ -0.78
SNCAIP-209ENST00000508017 DUSP14O95147 198 aaKnown RBP10.15□□□□□ -0.78
SNCAIP-209ENST00000508017 ASIPP42127 132 aa10.15□□□□□ -0.78
SNCAIP-209ENST00000508017 SMCPP49901 116 aaPredicted RBP10.15□□□□□ -0.78
SNCAIP-209ENST00000508017 C5orf56Q8N8D9 126 aa10.15□□□□□ -0.78
SNCAIP-209ENST00000508017 K7ENP7 123 aa10.15□□□□□ -0.79
SNCAIP-209ENST00000508017 COX6B1P14854 86 aa10.15□□□□□ -0.79
SNCAIP-209ENST00000508017 RNASE4P34096 147 aaKnown RBP10.15□□□□□ -0.79
SNCAIP-209ENST00000508017 SCGB1D4Q6XE38 83 aa10.15□□□□□ -0.79
SNCAIP-209ENST00000508017 TRAV21A0A0B4J279 112 aa10.14□□□□□ -0.79
SNCAIP-209ENST00000508017 NDUFS8O00217 210 aa10.14□□□□□ -0.79
SNCAIP-209ENST00000508017 CRYGDP07320 174 aa10.14□□□□□ -0.79
SNCAIP-209ENST00000508017 IGKV3-7A0A075B6H7 116 aa10.14□□□□□ -0.79
SNCAIP-209ENST00000508017 OR10J6PQ8NGY7 276 aa10.14□□□□□ -0.79
SNCAIP-209ENST00000508017 LINC00477Q96M19 166 aa10.14□□□□□ -0.79
SNCAIP-209ENST00000508017 LENEPQ9Y5L5 61 aa10.14□□□□□ -0.79
SNCAIP-209ENST00000508017 IGF2RP11717 2491 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 IGHV3OR16-10A0A075B7F0 116 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 APOMO95445 188 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 TSPAN13O95857 204 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 TSHBP01222 138 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 ARL3P36405 182 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 FOXC1Q12948 553 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 ZFP2Q6ZN57 461 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 COL6A6A6NMZ7 2263 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 TRAV41A0A0B4J266 112 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 C11orf86A6NJI1 115 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 SOCS3O14543 225 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 RNASE3P12724 160 aaKnown RBP10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 UBE2D1P51668 147 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 SRSF9Q13242 221 aaKnown RBP eCLIP10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 CFAP126Q5VTH2 177 aa10.13□□□□□ -0.79
SNCAIP-209ENST00000508017 IGLV4-69A0A075B6H9 119 aa10.12□□□□□ -0.79
SNCAIP-209ENST00000508017 LOC107984156A0A0G2JMH3 177 aa10.12□□□□□ -0.79
SNCAIP-209ENST00000508017 PSMB2P49721 201 aa10.12□□□□□ -0.79
SNCAIP-209ENST00000508017 ARL17AQ8IVW1 177 aa10.12□□□□□ -0.79
SNCAIP-209ENST00000508017 NPFFO15130 113 aa10.12□□□□□ -0.79
SNCAIP-209ENST00000508017 NFE4Q86UQ8 179 aa10.12□□□□□ -0.79
SNCAIP-209ENST00000508017 RPL11P62913 178 aaKnown RBP10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 FOXI1Q12951 378 aa10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 DLX4Q92988 240 aaPredicted RBP10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 C1QTNF4Q9BXJ3 329 aa10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 JPT2Q9H910 190 aa10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 COL12A1Q99715 3063 aa10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 ABCA2Q9BZC7 2435 aa10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 SPTAN1Q13813 2472 aaKnown RBP10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 OVOL1O14753 267 aa10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 C19orf54Q5BKX5 351 aa10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 PTH2Q96A98 100 aa10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 ATP6V0BQ99437 205 aa10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 TP53TG1Q9Y2A0 90 aa10.11□□□□□ -0.79
SNCAIP-209ENST00000508017 CD7P09564 240 aa10.1□□□□□ -0.79
SNCAIP-209ENST00000508017 TSPEAR-AS2P59090 65 aa10.1□□□□□ -0.79
SNCAIP-209ENST00000508017 LINC00315P59091 139 aa10.1□□□□□ -0.79
SNCAIP-209ENST00000508017 RPL39P62891 51 aaKnown RBP10.1□□□□□ -0.79
SNCAIP-209ENST00000508017 Q6ZS46 218 aa10.1□□□□□ -0.79
SNCAIP-209ENST00000508017 ZNF418Q8TF45 676 aaPredicted RBP10.1□□□□□ -0.79
SNCAIP-209ENST00000508017 FAM19A4Q96LR4 140 aa10.1□□□□□ -0.79
SNCAIP-209ENST00000508017 MAP1AP78559 2803 aaPredicted RBP10.1□□□□□ -0.79
SNCAIP-209ENST00000508017 TMEM238LA0A1B0GVL6 79 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 A6NJY4 79 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 IGHV3-11P01762 117 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 FHL3Q13643 280 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 SYT8Q8NBV8 401 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 KIF25-AS1Q9Y6Z4 181 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 A0A0J9YY99 117 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 FAM223BA6NKX1 122 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 LMO4P61968 165 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 FAM223AQ8IWN6 122 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 BPESC1Q9GZL8 116 aa10.09□□□□□ -0.79
SNCAIP-209ENST00000508017 IGIPA6NJ69 53 aa10.08□□□□□ -0.8
SNCAIP-209ENST00000508017 SRD5A1P18405 259 aa10.08□□□□□ -0.8
SNCAIP-209ENST00000508017 WFDC12Q8WWY7 111 aa10.08□□□□□ -0.8
SNCAIP-209ENST00000508017 CDIP1Q9H305 208 aa10.08□□□□□ -0.8
SNCAIP-209ENST00000508017 MED14OSP0DP75 135 aa10.08□□□□□ -0.8
SNCAIP-209ENST00000508017 UBE2D3P61077 147 aa10.08□□□□□ -0.8
SNCAIP-209ENST00000508017 UBE2D2P62837 147 aa10.08□□□□□ -0.8
SNCAIP-209ENST00000508017 UBTD1Q9HAC8 227 aa10.08□□□□□ -0.8
SNCAIP-209ENST00000508017 MOB4Q9Y3A3 225 aa10.08□□□□□ -0.8
SNCAIP-209ENST00000508017 A0A087WWL8 130 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 A0A1B0GV72 72 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 TGFAP01135 160 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 SUMO4Q6EEV6 95 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 NDUFA11Q86Y39 141 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 NDUFA4O00483 81 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 EDN2P20800 178 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 BRD3OSQ6XYD6 125 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 APRG1Q8IVJ8 170 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 POM121L12Q8N7R1 296 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 HIVEP3Q5T1R4 2406 aa10.07□□□□□ -0.8
SNCAIP-209ENST00000508017 TCL1BO95988 128 aa10.06□□□□□ -0.8
SNCAIP-209ENST00000508017 CARD19Q96LW7 228 aa10.06□□□□□ -0.8
SNCAIP-209ENST00000508017 NXPH4O95158 308 aa10.06□□□□□ -0.8
SNCAIP-209ENST00000508017 POLR2KP53803 58 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms