RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 POMPQ9Y244 141 aa2.81□□□□□ -1.96
HERC4-213ENST00000506515 TRAV30A0A087WSZ9 112 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 TRBV6-7A0A0A0MS04 114 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 H3BMM0 161 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 CORTO00230 105 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 FABP7O15540 132 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 GNG7O60262 68 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 TRAPPC2P0DI81 140 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 TRAPPC2BP0DI82 140 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 SAA1P0DJI8 122 aaPredicted RBP2.8□□□□□ -1.96
HERC4-213ENST00000506515 NQO2P16083 231 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 S100GP29377 79 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 ERHP84090 104 aaKnown RBP2.8□□□□□ -1.96
HERC4-213ENST00000506515 CATR1Q13166 79 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 OGFRL1Q5TC84 451 aaPredicted RBP2.8□□□□□ -1.96
HERC4-213ENST00000506515 Q5VSD8 79 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 C6orf201Q7Z4U5 140 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 C3orf22Q8N5N4 141 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 GDPD1Q8N9F7 314 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 OR1L8Q8NGR8 309 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 UBE2WQ96B02 151 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 TSC22D3Q99576 134 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 MS4A6AQ9H2W1 248 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 RABAC1Q9UI14 185 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 AP4S1Q9Y587 144 aa2.8□□□□□ -1.96
HERC4-213ENST00000506515 TRAV8-2A0A0B4J237 113 aa2.79□□□□□ -1.96
HERC4-213ENST00000506515 TCRBV3S1A0A5B6 114 aa2.79□□□□□ -1.96
HERC4-213ENST00000506515 OR2T8A6NH00 312 aa2.79□□□□□ -1.96
HERC4-213ENST00000506515 GSTZ1O43708 216 aaPredicted RBP2.79□□□□□ -1.96
HERC4-213ENST00000506515 OR13C7P0DN81 318 aa2.79□□□□□ -1.96
HERC4-213ENST00000506515 DAD1P61803 113 aa2.79□□□□□ -1.96
HERC4-213ENST00000506515 Q6ZS49 121 aa2.79□□□□□ -1.96
HERC4-213ENST00000506515 ZNF738Q8NE65 137 aa2.79□□□□□ -1.96
HERC4-213ENST00000506515 LSM10Q969L4 123 aaKnown RBP2.79□□□□□ -1.96
HERC4-213ENST00000506515 DCSTAMPQ9H295 470 aa2.79□□□□□ -1.96
HERC4-213ENST00000506515 CACFD1Q9UGQ2 172 aa2.79□□□□□ -1.96
HERC4-213ENST00000506515 NAGKQ9UJ70 344 aa2.79□□□□□ -1.96
HERC4-213ENST00000506515 IGKV3-7A0A075B6H7 116 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 TRAV3A0A0B4J244 114 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 H3BNG1 76 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 ARL6IP5O75915 188 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 ATG12O94817 140 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 TNFAIP8O95379 198 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 C1QBP02746 253 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 ATP5G1P05496 136 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 CTSGP08311 255 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 LGALS3P17931 250 aaKnown RBP2.78□□□□□ -1.96
HERC4-213ENST00000506515 PSMA1P25786 263 aaKnown RBP2.78□□□□□ -1.96
HERC4-213ENST00000506515 SNCAP37840 140 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 ATP5G3P48201 142 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 RRN3P1Q2M238 152 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 TDRG1Q3Y452 100 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 OR10J3Q5JRS4 329 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 EBLN2Q6P2I7 272 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 ZNF705AQ6ZN79 300 aaPredicted RBP2.78□□□□□ -1.96
HERC4-213ENST00000506515 IDO2Q6ZQW0 420 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 MRPL52Q86TS9 123 aaKnown RBP2.78□□□□□ -1.96
HERC4-213ENST00000506515 ZNRF2Q8NHG8 242 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 Q8WTZ3 238 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 MRAP2Q96G30 205 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 C7orf50Q9BRJ6 194 aaKnown RBP2.78□□□□□ -1.96
HERC4-213ENST00000506515 TMEM208Q9BTX3 173 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 TMEM70Q9BUB7 260 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 AK3Q9UIJ7 227 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 PRNDQ9UKY0 176 aa2.78□□□□□ -1.96
HERC4-213ENST00000506515 MYCBP2O75592 4640 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 FLG2Q5D862 2391 aaPredicted RBP2.77□□□□□ -1.97
HERC4-213ENST00000506515 EFCAB10A6NFE3 127 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 ZNF705FA8MVS1 300 aaPredicted RBP2.77□□□□□ -1.97
HERC4-213ENST00000506515 TMEM14DPA8MWL7 114 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 SULT1C2O00338 296 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 CRXO43186 299 aaPredicted RBP2.77□□□□□ -1.97
HERC4-213ENST00000506515 DENRO43583 198 aaKnown RBP2.77□□□□□ -1.97
HERC4-213ENST00000506515 ATP5HO75947 161 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 ZNF705DP0CH99 300 aaPredicted RBP2.77□□□□□ -1.97
HERC4-213ENST00000506515 ZNF705BP0CI00 300 aaPredicted RBP2.77□□□□□ -1.97
HERC4-213ENST00000506515 HTN3P15516 51 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 GTF2A1P52655 376 aaPredicted RBP2.77□□□□□ -1.97
HERC4-213ENST00000506515 EMP1P54849 157 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 OR10A3P58181 314 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 DEFA5Q01523 94 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 DHRS2Q13268 280 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 HSD17B12Q53GQ0 312 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 UPK3BQ9BT76 320 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 COMMD9Q9P000 198 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
HERC4-213ENST00000506515 TEX50A0A1B0GTY4 177 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 LOC100130705A0A1B0GUX0 176 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 IGLC7A0M8Q6 106 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 F5H768 121 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 PDCD5O14737 125 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 FABP1P07148 127 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 LIMS3P0CW19 117 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 LIMS4P0CW20 117 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 ETV6P41212 452 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 RAB31Q13636 194 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 ACOT6Q3I5F7 207 aaPredicted RBP2.76□□□□□ -1.97
HERC4-213ENST00000506515 ACSM3Q53FZ2 586 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 LPCAT3Q6P1A2 487 aa2.76□□□□□ -1.97
HERC4-213ENST00000506515 SFXN4Q6P4A7 337 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms