RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 AKR1D1P51857 326 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 COX6A2Q02221 97 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 NDUFA11Q86Y39 141 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 FAM213BQ8TBF2 198 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 SELENOSQ9BQE4 189 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 BPESC1Q9GZL8 116 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 SPANXA1Q9NS26 97 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 HSPB11Q9Y547 144 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 CCDC171Q6TFL3 1326 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 MUC12Q9UKN1 5478 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 CPDO75976 1380 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 ARHGAP31Q2M1Z3 1444 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 CDK13Q14004 1512 aaKnown RBP0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 PBRM1Q86U86 1689 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 PIEZO1Q92508 2521 aa0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 IGSF10Q6WRI0 2623 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 TENM4Q6N022 2769 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 IGF2RP11717 2491 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 ABCA13Q86UQ4 5058 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 HMCN2Q8NDA2 5059 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 A0A1B0GW64 132 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 RBAKDNA6NC62 111 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 PAEPP09466 180 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 RPS28P62857 69 aaKnown RBP0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 CYP2G1PQ6ZSU1 146 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 SLC25A26Q70HW3 274 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 ERG28Q9UKR5 140 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 NDUFAF1Q9Y375 327 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 UHRF1BP1LA0JNW5 1464 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 BPTFQ12830 3046 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 KDM5CP41229 1560 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 USH2AO75445 5202 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 MYH1P12882 1939 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 ABCA4P78363 2273 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 TPRP12270 2363 aaKnown RBP0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 RYR2Q92736 4967 aa0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 OTOGQ6ZRI0 2925 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 TRAV36DV7A0A075B6V5 113 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 CXorf51AA0A1B0GTR3 108 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 A0A1B0GX51 115 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 CCDC179H3BU77 68 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 LRP5O75197 1615 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 SOGA1O94964 1423 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 APODP05090 189 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 SCTP09683 121 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 COX4I1P13073 169 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 EMX2Q04743 252 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 FAT1Q14517 4588 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 HERC1Q15751 4861 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 KRTAP20-2Q3LI61 65 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 ZFYVE26Q68DK2 2539 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 TMEM91Q6ZNR0 172 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 HRNRQ86YZ3 2850 aaPredicted RBP0□□□□□ -2.41
HMGB1P29-201ENST00000505659 TCTE3Q8IZS6 198 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 ATP6V0E2Q8NHE4 81 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 DYNLRB2Q8TF09 96 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 BANF2Q9H503 90 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 BSNQ9UPA5 3926 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 GINS2Q9Y248 185 aa0□□□□□ -2.41
HMGB1P29-201ENST00000505659 NOP16Q9Y3C1 178 aaKnown RBP0□□□□□ -2.41
HMGB1P29-201ENST00000505659 RYR3Q15413 4870 aa-0□□□□□ -2.41
HMGB1P29-201ENST00000505659 VWFP04275 2813 aa-0□□□□□ -2.41
HMGB1P29-201ENST00000505659 NCOR2Q9Y618 2525 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 BIRC6Q9NR09 4857 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 LRP1Q07954 4544 aaKnown RBP-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 MYO7AQ13402 2215 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 ESPL1Q14674 2120 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 KIDINS220Q9ULH0 1771 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 DLEC1Q9Y238 1755 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 STAB1Q9NY15 2570 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 GNG14A0A1W2PPG7 69 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 J3QLW9 94 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 HLA-DRB4P13762 266 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 CMPK1P30085 196 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 ELOF1P60002 83 aaKnown RBP-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 OR8B8Q15620 311 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 CCDC153Q494R4 210 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 FAM74A4Q5TZK3 123 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 SNX29P2Q8IUI4 249 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 SMIM11BQ8TCY0 68 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 TMEM242Q9NWH2 141 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 SCP2D1Q9UJQ7 156 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 HLA-DRB4X5D2U9 266 aa-0.01□□□□□ -2.41
HMGB1P29-201ENST00000505659 CACNA1HO95180 2353 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 STARD9Q9P2P6 4700 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 LRP2P98164 4655 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 HERC2O95714 4834 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 DEGS1O15121 323 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 TNFSF15O95150 251 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 MT-ND4LP03901 98 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 DBIP07108 87 aaKnown RBP-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 SSBP1Q04837 148 aaKnown RBP-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 KRTAP20-1Q3LI63 56 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 OR2T2Q6IF00 324 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 SLC48A1Q6P1K1 146 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 ATP11AUNQ6ZP68 121 aa-0.02□□□□□ -2.41
HMGB1P29-201ENST00000505659 DNAJC15Q9Y5T4 150 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms