RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 K7EPK0 472 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 TSPAN13O95857 204 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 GPX1P07203 203 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 NMBP08949 121 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 AKR1C4P17516 323 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 RAB14P61106 215 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 SELENOTP62341 195 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 FOXI1Q12951 378 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 FFAR4Q5NUL3 377 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 FAAP20Q6NZ36 180 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 ATRAIDQ6UW56 229 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 SDIM1Q6ZPB5 146 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 LINC00305Q7Z4B0 112 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 BPIFA4PQ86YQ2 179 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 BOD1L2Q8IYS8 172 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 SLC25A29Q8N8R3 303 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 C9orf163Q8N9P6 203 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 RMI2Q96E14 147 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 LINC00477Q96M19 166 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 ATP5SQ99766 215 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 ACTR3CQ9C0K3 210 aaPredicted RBP4.39□□□□□ -1.71
VCAN-206ENST00000505615 OR51M1Q9H341 326 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 MTFP1Q9UDX5 166 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 KIF25-AS1Q9Y6Z4 181 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 V9GYY9 64 aa4.39□□□□□ -1.71
VCAN-206ENST00000505615 A0A087WZ39 114 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 H3BP45 60 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 PHOX2AO14813 284 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 ZNF253O75346 499 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 RAB3DO95716 219 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 PET100P0DJ07 73 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 LINC00694P0DN24 101 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 SURF2Q15527 256 aaPredicted RBP4.38□□□□□ -1.71
VCAN-206ENST00000505615 C14orf177Q52M58 125 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 MUC21Q5SSG8 566 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 S100A7AQ86SG5 101 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 AKAP14Q86UN6 197 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 C15orf54Q8N8G6 183 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 TMEM229BQ8NBD8 167 aa4.38□□□□□ -1.71
VCAN-206ENST00000505615 IGKV2-40A0A087WW87 121 aaPredicted RBP4.37□□□□□ -1.71
VCAN-206ENST00000505615 IGKV2D-40P01614 121 aaPredicted RBP4.37□□□□□ -1.71
VCAN-206ENST00000505615 AP3S2P59780 193 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 PRR3P79522 188 aaKnown RBP4.37□□□□□ -1.71
VCAN-206ENST00000505615 SLC38A11Q08AI6 406 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 RHOHQ15669 191 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 TMEM183BQ1AE95 376 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 SPANXN5Q5MJ07 72 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 TMEM183AQ8IXX5 376 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 OR51S1Q8NGJ8 323 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 LYPD6BQ8NI32 183 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 CNBD2Q96M20 576 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 CIB3Q96Q77 187 aaPredicted RBP4.37□□□□□ -1.71
VCAN-206ENST00000505615 ZNF492Q9P255 531 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 COMMD3Q9UBI1 195 aa4.37□□□□□ -1.71
VCAN-206ENST00000505615 A0A087WYN8 130 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 SMIM31A0A1B0GVY4 71 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 TRBV6-4A0A1B0GX49 114 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 M0R2P5 195 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 SYNGR2O43760 224 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 HPGDSO60760 199 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 MED6O75586 246 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 PRSS1P07477 247 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 TAS2R19P59542 299 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 UBE2MP61081 183 aaKnown RBP4.36□□□□□ -1.71
VCAN-206ENST00000505615 RIGQ13278 110 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 GUK1Q16774 197 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 PXDC1Q5TGL8 231 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 SUMO4Q6EEV6 95 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 Q6ZVQ6 151 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 NIT1Q86X76 327 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 UBE2WQ96B02 151 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 ZC2HC1AQ96GY0 325 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 PRADC1Q9BSG0 188 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 KLK12Q9UKR0 248 aa4.36□□□□□ -1.71
VCAN-206ENST00000505615 TRBV19A0A075B6N1 114 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 ANKRD65E5RJM6 399 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 COX7A2P2O60397 106 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 OR10J4P0C629 311 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 CHTF8P0CG12 524 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 SLC25A6P12236 298 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 RRAS2P62070 204 aaPredicted RBP4.35□□□□□ -1.71
VCAN-206ENST00000505615 SRSF9Q13242 221 aaKnown RBP eCLIP4.35□□□□□ -1.71
VCAN-206ENST00000505615 ZNF266Q14584 549 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 Q6AWC8 147 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 DPPA3Q6W0C5 159 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 LINC01561Q8N1V8 128 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 Q8TAT8 98 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 SPACA4Q8TDM5 124 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 YIPF6Q96EC8 236 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 RNF185Q96GF1 192 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 PLAC8Q9NZF1 115 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 KCNIP3Q9Y2W7 256 aa4.35□□□□□ -1.71
VCAN-206ENST00000505615 IGHV3-73A0A0B4J1V6 119 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 TRBV7-9A0A0J9YWB2 115 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 DUXBA0A1W2PPF3 345 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 FNDC10F2Z333 226 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 GOSR2O14653 212 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 AGPAT2O15120 278 aa4.34□□□□□ -1.71
VCAN-206ENST00000505615 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms