RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 RBM3P98179 157 aaKnown RBP-0.86□□□□□ -2.55
SMN2-205ENST00000505346 TMED2Q15363 201 aa-0.86□□□□□ -2.55
SMN2-205ENST00000505346 UNQ5815/PRO19632Q6UWF5 114 aa-0.86□□□□□ -2.55
SMN2-205ENST00000505346 LINC00305Q7Z4B0 112 aa-0.86□□□□□ -2.55
SMN2-205ENST00000505346 SMIM7Q9BQ49 75 aa-0.86□□□□□ -2.55
SMN2-205ENST00000505346 WDR97A6NE52 1622 aa-0.86□□□□□ -2.55
SMN2-205ENST00000505346 PKDREJQ9NTG1 2253 aa-0.86□□□□□ -2.55
SMN2-205ENST00000505346 MAP1BP46821 2468 aaKnown RBP-0.87□□□□□ -2.55
SMN2-205ENST00000505346 MXRA5Q9NR99 2828 aa-0.87□□□□□ -2.55
SMN2-205ENST00000505346 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.87□□□□□ -2.55
SMN2-205ENST00000505346 TRBV10-1A0A0K0K1A3 114 aa-0.87□□□□□ -2.55
SMN2-205ENST00000505346 TMEM210A6NLX4 147 aa-0.87□□□□□ -2.55
SMN2-205ENST00000505346 FAM24BQ8N5W8 94 aa-0.87□□□□□ -2.55
SMN2-205ENST00000505346 DYDC1Q8WWB3 177 aa-0.87□□□□□ -2.55
SMN2-205ENST00000505346 COA4Q9NYJ1 87 aa-0.87□□□□□ -2.55
SMN2-205ENST00000505346 UFC1Q9Y3C8 167 aa-0.87□□□□□ -2.55
SMN2-205ENST00000505346 BIRC6Q9NR09 4857 aa-0.87□□□□□ -2.55
SMN2-205ENST00000505346 COL12A1Q99715 3063 aa-0.87□□□□□ -2.55
SMN2-205ENST00000505346 PTPRGP23470 1445 aa-0.88□□□□□ -2.55
SMN2-205ENST00000505346 PLXNA2O75051 1894 aa-0.88□□□□□ -2.55
SMN2-205ENST00000505346 TNRC18O15417 2968 aaPredicted RBP-0.88□□□□□ -2.55
SMN2-205ENST00000505346 FLNBO75369 2602 aaKnown RBP-0.88□□□□□ -2.55
SMN2-205ENST00000505346 TRAV13-1A0A0B4J241 112 aa-0.88□□□□□ -2.55
SMN2-205ENST00000505346 ADCYAP1P18509 176 aa-0.88□□□□□ -2.55
SMN2-205ENST00000505346 CRYGSP22914 178 aa-0.88□□□□□ -2.55
SMN2-205ENST00000505346 CRYBA4P53673 196 aa-0.88□□□□□ -2.55
SMN2-205ENST00000505346 MRPS25P82663 173 aaKnown RBP-0.88□□□□□ -2.55
SMN2-205ENST00000505346 OTOSQ8NHW6 89 aa-0.88□□□□□ -2.55
SMN2-205ENST00000505346 LAMTOR3Q9UHA4 124 aa-0.88□□□□□ -2.55
SMN2-205ENST00000505346 NIPBLQ6KC79 2804 aaeCLIP-0.88□□□□□ -2.55
SMN2-205ENST00000505346 CHD6Q8TD26 2715 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 TRAV17A0A0B4J275 112 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 TEX49A0A1B0GTD5 131 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 ZNF670-ZNF695F2Z2N8 137 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 PRM1P04553 51 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 HRCT1Q6UXD1 115 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 SMIM11BQ8TCY0 68 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 BET1LQ9NYM9 111 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 PLXNA1Q9UIW2 1896 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 AKAP11Q9UKA4 1901 aa-0.89□□□□□ -2.55
SMN2-205ENST00000505346 FLGP20930 4061 aaPredicted RBP-0.89□□□□□ -2.55
SMN2-205ENST00000505346 MYH9P35579 1960 aaKnown RBP-0.9□□□□□ -2.55
SMN2-205ENST00000505346 FASNP49327 2511 aaKnown RBP-0.9□□□□□ -2.55
SMN2-205ENST00000505346 TRAV12-2A0A075B6T6 113 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 A0A087WTM6 91 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 IGHV1-24A0A0C4DH33 117 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 PPP5D1E7EU14 171 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 H3BMG7 143 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 M0QZK8 103 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 OR2H2O95918 312 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 SDC4P31431 198 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 POLR2JP52435 117 aaKnown RBP-0.9□□□□□ -2.55
SMN2-205ENST00000505346 STX19Q8N4C7 294 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 AP3S1Q92572 193 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 USP9XQ93008 2570 aaPredicted RBP-0.9□□□□□ -2.55
SMN2-205ENST00000505346 SVEP1Q4LDE5 3571 aa-0.9□□□□□ -2.55
SMN2-205ENST00000505346 HBDP02042 147 aa-0.91□□□□□ -2.56
SMN2-205ENST00000505346 CKS2P33552 79 aa-0.91□□□□□ -2.56
SMN2-205ENST00000505346 OR4S1Q8NGB4 309 aa-0.91□□□□□ -2.56
SMN2-205ENST00000505346 HOPXQ9BPY8 73 aaPredicted RBP-0.91□□□□□ -2.56
SMN2-205ENST00000505346 KIF13AQ9H1H9 1805 aa-0.92□□□□□ -2.56
SMN2-205ENST00000505346 WNK1Q9H4A3 2382 aa-0.92□□□□□ -2.56
SMN2-205ENST00000505346 PRRC2CQ9Y520 2896 aaKnown RBP-0.92□□□□□ -2.56
SMN2-205ENST00000505346 BIVM-ERCC5R4GMW8 1640 aa-0.92□□□□□ -2.56
SMN2-205ENST00000505346 PIEZO2Q9H5I5 2752 aa-0.92□□□□□ -2.56
SMN2-205ENST00000505346 CXorf51AA0A1B0GTR3 108 aa-0.92□□□□□ -2.56
SMN2-205ENST00000505346 SPRR2BP35325 72 aa-0.92□□□□□ -2.56
SMN2-205ENST00000505346 BRK1Q8WUW1 75 aa-0.92□□□□□ -2.56
SMN2-205ENST00000505346 CBLN4Q9NTU7 201 aa-0.92□□□□□ -2.56
SMN2-205ENST00000505346 C2CD3Q4AC94 2353 aa-0.92□□□□□ -2.56
SMN2-205ENST00000505346 CASZ1Q86V15 1759 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 TRBV7-6A0A0J9YX20 115 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 LOC107984640A0A0U1RRK4 108 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 APODP05090 189 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 S100A6P06703 90 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 TCTAP57738 103 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 DCUN1D2Q6PH85 259 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 TMED4Q7Z7H5 227 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 LXNQ9BS40 222 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 LAMTOR2Q9Y2Q5 125 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 NHSL1Q5SYE7 1610 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 ABCA13Q86UQ4 5058 aa-0.93□□□□□ -2.56
SMN2-205ENST00000505346 PI4KAP42356 2102 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 ZNF142P52746 1687 aaPredicted RBP-0.94□□□□□ -2.56
SMN2-205ENST00000505346 EIF3AQ14152 1382 aaKnown RBP-0.94□□□□□ -2.56
SMN2-205ENST00000505346 DNHD1Q96M86 4753 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 SYNMO15061 1565 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 YTHDC2Q9H6S0 1430 aaKnown RBP-0.94□□□□□ -2.56
SMN2-205ENST00000505346 APOC1P02654 83 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 COX4I1P13073 169 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 SERPINB1P30740 379 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 DEFB109BQ30KR1 87 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 PPP1R1CQ8WVI7 109 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 CHMP6Q96FZ7 201 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 Q96NJ1 140 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 TRAPPC2LQ9UL33 140 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 MED31Q9Y3C7 131 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 FAT2Q9NYQ8 4349 aa-0.94□□□□□ -2.56
SMN2-205ENST00000505346 WDR87Q6ZQQ6 2873 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms