RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 ARHGEF12Q9NZN5 1544 aa1.84□□□□□ -2.11
LINC01088-202ENST00000505149 FANCMQ8IYD8 2048 aa1.84□□□□□ -2.12
LINC01088-202ENST00000505149 MADDQ8WXG6 1647 aa1.84□□□□□ -2.12
LINC01088-202ENST00000505149 ABCA3Q99758 1704 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 NUP205Q92621 2012 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 LRRC7Q96NW7 1537 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 ECM29Q5VYK3 1845 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 TRAV13-2A0A0B4J235 113 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 TRAV3A0A0B4J244 114 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 A0A0G2JND7 137 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 H3BMM0 161 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 CPSF4O95639 269 aaKnown RBP1.83□□□□□ -2.12
LINC01088-202ENST00000505149 XCL1P47992 114 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 EFNA4P52798 201 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 FXYD2P54710 66 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 KRTAP13-2Q52LG2 175 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 KPRPQ5T749 579 aaPredicted RBP1.83□□□□□ -2.12
LINC01088-202ENST00000505149 SLC48A1Q6P1K1 146 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 SDIM1Q6ZPB5 146 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 BAGE3Q86Y29 109 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 BAGE2Q86Y30 109 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 Q8IYB0 196 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 Q8N814 137 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 CIRBP-AS1Q8TBR5 109 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 UBE2WQ96B02 151 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 CYP4F30PQ9H0H9 118 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 DYNLRB1Q9NP97 96 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 MANBALQ9NQG1 85 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 ICOSQ9Y6W8 199 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 U3KQK5 164 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 CEP170Q5SW79 1584 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 RALGAPA2Q2PPJ7 1873 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 PIK3C2AO00443 1686 aa1.83□□□□□ -2.12
LINC01088-202ENST00000505149 CCDC88AQ3V6T2 1871 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 MYH9P35579 1960 aaKnown RBP1.82□□□□□ -2.12
LINC01088-202ENST00000505149 CC2D2AQ9P2K1 1620 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 IGLV3-12A0A075B6K2 115 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 IGKV2D-26A0A0A0MRZ7 120 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 TRAV40A0A0B4J280 105 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 A0A0B4J2C4 111 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 IGLV1-51P01701 117 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 C3orf79P0CE67 100 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 CD24P25063 80 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 SYCNQ0VAF6 134 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 C9orf116Q5BN46 136 aaPredicted RBP1.82□□□□□ -2.12
LINC01088-202ENST00000505149 C2orf91Q6ZV80 131 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 LYZL2Q7Z4W2 148 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 DYNAPQ8N1N2 210 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 FAM19A2Q8N3H0 131 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 MIR7-3HGQ8N6C7 128 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 C15orf56Q8N910 161 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 SPTSSBQ8NFR3 76 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 LINC01560Q8TB33 94 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 TIMM21Q9BVV7 248 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 ARL2-SNX15V9GYD0 113 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 SCN1AP35498 2009 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 NUP214P35658 2090 aaPredicted RBP1.82□□□□□ -2.12
LINC01088-202ENST00000505149 DOCK8Q8NF50 2099 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 COL18A1P39060 1754 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 SIPA1L1O43166 1804 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 NUP210LQ5VU65 1888 aa1.82□□□□□ -2.12
LINC01088-202ENST00000505149 CDK12Q9NYV4 1490 aaPredicted RBP1.82□□□□□ -2.12
LINC01088-202ENST00000505149 ALPK3Q96L96 1907 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 GPR179Q6PRD1 2367 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 TRIOBPQ9H2D6 2365 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 ADGRB3O60242 1522 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 KCPQ6ZWJ8 1503 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 PLXNC1O60486 1568 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 ABCA8O94911 1581 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 DIP2CQ9Y2E4 1556 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 ATG2BQ96BY7 2078 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 ABCA9Q8IUA7 1624 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 POLEQ07864 2286 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 TRAV7A0A075B6U4 112 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 IGHV3-15A0A0B4J1V0 119 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 TRBV10-3A0A0K0K1G6 114 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 TRBV10-2A0A0K0K1G8 114 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 HCG22E2RYF7 251 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 H7BZZ5 65 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 FXYD1O00168 92 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 CRPP02741 224 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 ROMO1P60602 79 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 C1orf134Q5TEV5 83 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 Q5W150 140 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 LYPD5Q6UWN5 251 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 LYZL1Q6UWQ5 148 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 CASC2Q6XLA1 102 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 NTM-AS1Q6ZSK4 140 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 Q8NDZ9 215 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 C1orf64Q8NEQ6 169 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 CYSTM1Q9H1C7 97 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 C14orf132Q9NPU4 83 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 ZNF355PQ9NSJ1 428 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 ZNRD1Q9P1U0 126 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 PRO1854Q9UHT4 67 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 TMEM14AQ9Y6G1 99 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 KIF13AQ9H1H9 1805 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 NLRC5Q86WI3 1866 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 CFAP74Q9C0B2 1584 aa1.81□□□□□ -2.12
LINC01088-202ENST00000505149 KIF14Q15058 1648 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms