RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 RIPPLY3P57055 190 aa7.53□□□□□ -1.2
TPM3-217ENST00000504663 KPRPQ5T749 579 aaPredicted RBP7.53□□□□□ -1.2
TPM3-217ENST00000504663 MORN3Q6PF18 240 aaPredicted RBP7.53□□□□□ -1.2
TPM3-217ENST00000504663 RASL11AQ6T310 242 aa7.53□□□□□ -1.2
TPM3-217ENST00000504663 ZNF705AQ6ZN79 300 aaPredicted RBP7.53□□□□□ -1.2
TPM3-217ENST00000504663 MSRB1Q9NZV6 116 aa7.53□□□□□ -1.2
TPM3-217ENST00000504663 MDFICQ9P1T7 246 aa7.53□□□□□ -1.2
TPM3-217ENST00000504663 NOTCH1P46531 2555 aa7.53□□□□□ -1.2
TPM3-217ENST00000504663 A0A1B0GUT8 65 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 PLAC8L1A1L4L8 177 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 XKRY2A2RUG3 117 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 A8MZ25 164 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 TRGC2P03986 189 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 ASIPP42127 132 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 RPS10P46783 165 aaKnown RBP7.52□□□□□ -1.21
TPM3-217ENST00000504663 HBBP68871 147 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 KRTAP21-3Q3LHN1 58 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 WDR73Q6P4I2 378 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 FAM159AQ6UWV7 190 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 ZNF493Q6ZR52 646 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 KCNS1Q96KK3 526 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 GNB1LQ9BYB4 327 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 MGAM2Q2M2H8 2515 aa7.52□□□□□ -1.21
TPM3-217ENST00000504663 SNURFLB1AK76 121 aa7.51□□□□□ -1.21
TPM3-217ENST00000504663 IGHV4-30-4P0DP06 118 aa7.51□□□□□ -1.21
TPM3-217ENST00000504663 AZU1P20160 251 aa7.51□□□□□ -1.21
TPM3-217ENST00000504663 SLAQ13239 276 aa7.51□□□□□ -1.21
TPM3-217ENST00000504663 FRZBQ92765 325 aa7.51□□□□□ -1.21
TPM3-217ENST00000504663 TPPP3Q9BW30 176 aa7.51□□□□□ -1.21
TPM3-217ENST00000504663 NACAE9PAV3 2078 aa7.51□□□□□ -1.21
TPM3-217ENST00000504663 F2Z2F3 143 aa7.5□□□□□ -1.21
TPM3-217ENST00000504663 TNFRSF6BO95407 300 aa7.5□□□□□ -1.21
TPM3-217ENST00000504663 NTF3P20783 257 aa7.5□□□□□ -1.21
TPM3-217ENST00000504663 CAMPP49913 170 aa7.5□□□□□ -1.21
TPM3-217ENST00000504663 TMEM256Q8N2U0 113 aa7.5□□□□□ -1.21
TPM3-217ENST00000504663 RNASE8Q8TDE3 154 aaKnown RBP7.5□□□□□ -1.21
TPM3-217ENST00000504663 RNF185Q96GF1 192 aa7.5□□□□□ -1.21
TPM3-217ENST00000504663 CSTL1Q9H114 145 aa7.5□□□□□ -1.21
TPM3-217ENST00000504663 TRGV11A0A075B6L2 103 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 LOC102724200A0A096LPH7 203 aaPredicted RBP7.49□□□□□ -1.21
TPM3-217ENST00000504663 KIR2DL5BA0A0G2JN68 375 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 KIR2DL5BA0A0G2JPC4 375 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 HLA-DQA1P01909 254 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 LINC00315P59091 139 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 FABP9Q0Z7S8 132 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 RIGQ13278 110 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 COX19Q49B96 90 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 KIR2DL5AQ8N109 375 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 KIR2DL5BQ8NHK3 375 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 KIF25-AS1Q9Y6Z4 181 aa7.49□□□□□ -1.21
TPM3-217ENST00000504663 A0A1B0GW15 77 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 CBY3A6NI87 242 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST1H2BKO60814 126 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 MT-ND6P03923 174 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST1H2BJP06899 126 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 TRGC1P0CF51 173 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST1H2BOP23527 126 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST1H2BBP33778 126 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST1H2BDP58876 126 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 NUTF2P61970 127 aaKnown RBP7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST1H2BCP62807 126 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 CACNG7P62955 275 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST2H2BEQ16778 126 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.48□□□□□ -1.21
TPM3-217ENST00000504663 ZFP82Q8N141 532 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 POM121L12Q8N7R1 296 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST1H2BHQ93079 126 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 LINC01587Q99440 93 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST1H2BNQ99877 126 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 HIST1H2BMQ99879 126 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 TMEM191AQ9H0A3 160 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 TRAPPC1Q9Y5R8 145 aa7.48□□□□□ -1.21
TPM3-217ENST00000504663 PRKDCP78527 4128 aaKnown RBP7.47□□□□□ -1.21
TPM3-217ENST00000504663 GAS8-AS1O95177 125 aa7.47□□□□□ -1.21
TPM3-217ENST00000504663 TWIST1Q15672 202 aa7.47□□□□□ -1.21
TPM3-217ENST00000504663 FAM104BQ5XKR9 115 aa7.47□□□□□ -1.21
TPM3-217ENST00000504663 UFSP1Q6NVU6 142 aa7.47□□□□□ -1.21
TPM3-217ENST00000504663 AMN1Q8IY45 258 aa7.47□□□□□ -1.21
TPM3-217ENST00000504663 PTH2Q96A98 100 aa7.47□□□□□ -1.21
TPM3-217ENST00000504663 C1QTNF4Q9BXJ3 329 aa7.47□□□□□ -1.21
TPM3-217ENST00000504663 JPT2Q9H910 190 aa7.47□□□□□ -1.21
TPM3-217ENST00000504663 GSN-AS1Q9NRJ2 163 aa7.47□□□□□ -1.21
TPM3-217ENST00000504663 TIMM8BQ9Y5J9 83 aaPredicted RBP7.47□□□□□ -1.21
TPM3-217ENST00000504663 U3KQK5 164 aa7.47□□□□□ -1.21
TPM3-217ENST00000504663 C1orf196B1AJZ1 125 aa7.46□□□□□ -1.22
TPM3-217ENST00000504663 K7EIL1 84 aa7.46□□□□□ -1.22
TPM3-217ENST00000504663 M0R381 172 aa7.46□□□□□ -1.22
TPM3-217ENST00000504663 EVI2AP22794 236 aa7.46□□□□□ -1.22
TPM3-217ENST00000504663 S100A4P26447 101 aaKnown RBP7.46□□□□□ -1.22
TPM3-217ENST00000504663 LINC00310P59036 64 aa7.46□□□□□ -1.22
TPM3-217ENST00000504663 SSTP61278 116 aa7.46□□□□□ -1.22
TPM3-217ENST00000504663 ZNF415Q09FC8 603 aa7.46□□□□□ -1.22
TPM3-217ENST00000504663 KIAA1644Q3SXP7 199 aa7.46□□□□□ -1.22
TPM3-217ENST00000504663 MRPL51Q4U2R6 128 aaKnown RBP7.46□□□□□ -1.22
TPM3-217ENST00000504663 TMEM263Q8WUH6 116 aaKnown RBP7.46□□□□□ -1.22
TPM3-217ENST00000504663 GOLT1BQ9Y3E0 138 aa7.46□□□□□ -1.22
TPM3-217ENST00000504663 TENM3Q9P273 2699 aa7.46□□□□□ -1.22
TPM3-217ENST00000504663 IGHV3OR16-12A0A075B7B8 117 aa7.45□□□□□ -1.22
TPM3-217ENST00000504663 APCSP02743 223 aa7.45□□□□□ -1.22
TPM3-217ENST00000504663 RAB4AP20338 218 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms