RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 MYH8P13535 1937 aa1.75□□□□□ -2.13
COPS4-203ENST00000504274 TNRC6AQ8NDV7 1962 aaKnown RBP1.74□□□□□ -2.13
COPS4-203ENST00000504274 SORL1Q92673 2214 aa1.74□□□□□ -2.13
COPS4-203ENST00000504274 TRAV14DV4A0A0A6YYC5 116 aa1.74□□□□□ -2.13
COPS4-203ENST00000504274 TCRBV4S1A1TA0A5B7 111 aa1.74□□□□□ -2.13
COPS4-203ENST00000504274 J3QLW9 94 aa1.74□□□□□ -2.13
COPS4-203ENST00000504274 IFITM1P13164 125 aa1.74□□□□□ -2.13
COPS4-203ENST00000504274 ADCYAP1P18509 176 aa1.74□□□□□ -2.13
COPS4-203ENST00000504274 HINT1P49773 126 aaPredicted RBP1.74□□□□□ -2.13
COPS4-203ENST00000504274 LSM3P62310 102 aaKnown RBP1.74□□□□□ -2.13
COPS4-203ENST00000504274 Q1T7F1 81 aa1.74□□□□□ -2.13
COPS4-203ENST00000504274 SLC25A26Q70HW3 274 aa1.74□□□□□ -2.13
COPS4-203ENST00000504274 NDUFB11Q9NX14 153 aa1.74□□□□□ -2.13
COPS4-203ENST00000504274 STRCP1A6NGW2 1772 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 CASP8AP2Q9UKL3 1982 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 A0A1W2PRS3 328 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 YPEL1O60688 119 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 PRB4P10163 310 aaPredicted RBP1.73□□□□□ -2.13
COPS4-203ENST00000504274 OR2T2Q6IF00 324 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.73□□□□□ -2.13
COPS4-203ENST00000504274 CLECL1Q8IZS7 167 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 C4orf33Q8N1A6 199 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 TSKUQ8WUA8 353 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 TMEM106BQ9NUM4 274 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 LINC00312Q9Y6C7 94 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 PPIP5K1Q6PFW1 1433 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 SBF2Q86WG5 1849 aa1.73□□□□□ -2.13
COPS4-203ENST00000504274 KTN1Q86UP2 1357 aaKnown RBP1.72□□□□□ -2.13
COPS4-203ENST00000504274 ERC2-IT1O76042 136 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 MT-ATP8P03928 68 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 TFF1P04155 84 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 PIRTP0C851 137 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 CXCL8P10145 99 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 RPL26P61254 145 aaKnown RBP1.72□□□□□ -2.13
COPS4-203ENST00000504274 C1orf137Q5JT78 98 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 COL5A1-AS1Q5SY13 56 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 CASC2Q6XLA1 102 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 TMEM254Q8TBM7 123 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 FAIMQ9NVQ4 179 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 TMEM242Q9NWH2 141 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 NDUFA12Q9UI09 145 aa1.72□□□□□ -2.13
COPS4-203ENST00000504274 ARAP2Q8WZ64 1704 aa1.71□□□□□ -2.13
COPS4-203ENST00000504274 NINQ8N4C6 2090 aa1.71□□□□□ -2.13
COPS4-203ENST00000504274 CECR2Q9BXF3 1484 aa1.71□□□□□ -2.14
COPS4-203ENST00000504274 RBAKDNA6NC62 111 aa1.71□□□□□ -2.14
COPS4-203ENST00000504274 APOC4-APOC2K7ER74 178 aa1.71□□□□□ -2.14
COPS4-203ENST00000504274 PROSCO94903 275 aa1.71□□□□□ -2.14
COPS4-203ENST00000504274 APOC2P02655 101 aa1.71□□□□□ -2.14
COPS4-203ENST00000504274 GYPBP06028 91 aa1.71□□□□□ -2.14
COPS4-203ENST00000504274 RNASE3P12724 160 aaKnown RBP1.71□□□□□ -2.14
COPS4-203ENST00000504274 SPRNQ5BIV9 151 aa1.71□□□□□ -2.14
COPS4-203ENST00000504274 ABCC5O15440 1437 aa1.71□□□□□ -2.14
COPS4-203ENST00000504274 BRWD1Q9NSI6 2320 aa1.71□□□□□ -2.14
COPS4-203ENST00000504274 PCDH15Q96QU1 1955 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 SNRNP200O75643 2136 aaKnown RBP1.7□□□□□ -2.14
COPS4-203ENST00000504274 TRGV4A0A0C4DH28 118 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 CXorf51AA0A1B0GTR3 108 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 RTEL1-TNFRSF6BF6WH68 1400 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 IL5P05113 134 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 MON2Q7Z3U7 1717 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 SBSPONQ8IVN8 264 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 DYNLRB2Q8TF09 96 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 PATE1Q8WXA2 126 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 SMIM7Q9BQ49 75 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 DPH3P1Q9H4G8 78 aa1.7□□□□□ -2.14
COPS4-203ENST00000504274 BAZ2BQ9UIF8 2168 aaKnown RBP1.7□□□□□ -2.14
COPS4-203ENST00000504274 ZNF142P52746 1687 aaPredicted RBP1.7□□□□□ -2.14
COPS4-203ENST00000504274 PXDNLA1KZ92 1463 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 TEX14Q8IWB6 1497 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 MED12LQ86YW9 2145 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 CPSF1Q10570 1443 aaKnown RBP1.69□□□□□ -2.14
COPS4-203ENST00000504274 TNRC6BQ9UPQ9 1833 aaKnown RBP1.69□□□□□ -2.14
COPS4-203ENST00000504274 TMEM262E9PQX1 116 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 NDUFB6O95139 128 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 SLC25A6P12236 298 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 S100A7L2Q5SY68 101 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 CSAG1Q6PB30 78 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 SPTSSAQ969W0 71 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 LIMD2Q9BT23 127 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 KRTAP4-1Q9BYQ7 146 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 LINC00474Q9P2X8 69 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 PHRF1Q9P1Y6 1649 aaKnown RBP1.69□□□□□ -2.14
COPS4-203ENST00000504274 ARHGAP35Q9NRY4 1499 aa1.69□□□□□ -2.14
COPS4-203ENST00000504274 TNS1Q9HBL0 1735 aaKnown RBP1.69□□□□□ -2.14
COPS4-203ENST00000504274 LAMC3Q9Y6N6 1575 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 MYOFQ9NZM1 2061 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 C10orf71Q711Q0 1435 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 IGKCP01834 107 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 PRB1P04280 392 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 NPC2P61916 151 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 PYY3Q5JQD4 70 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 Q6ZRN7 208 aaPredicted RBP1.68□□□□□ -2.14
COPS4-203ENST00000504274 SVBPQ8N300 66 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 COPS9Q8WXC6 57 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 LINC00052Q96N35 136 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 ODF3Q96PU9 254 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 TANC1Q9C0D5 1861 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 ARFGEF3Q5TH69 2177 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
COPS4-203ENST00000504274 FN1P02751 2386 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms