RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 YIF1AO95070 293 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 IFNA4P05014 189 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 S100A7P31151 101 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 PSMB3P49720 205 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 MEOX2P50222 304 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 RAB5BP61020 215 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 RBMY1FQ15415 496 aaKnown RBP4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 ORMDL2Q53FV1 153 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 SPATA31B1PQ5VZV4 182 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 MORN3Q6PF18 240 aaPredicted RBP4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 FAM24BQ8N5W8 94 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 C7orf33Q8WU49 177 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 GPR82Q96P67 336 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 TMEM243Q9BU79 118 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 KMT2AQ03164 3969 aa4.11□□□□□ -1.75
TMEM39A-212ENST00000497993 IGHV3-49A0A0A0MS15 119 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 LCE6AA0A183 80 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 A0A1B0GVG6 124 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 ZFP92A6NM28 416 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 KRTAP4-16G5E9R7 235 aaPredicted RBP4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 ISLRO14498 428 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 DEDDO75618 318 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 CCNKO75909 580 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 IAPPP10997 89 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 HLA-DRB4P13762 266 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 CXCL2P19875 107 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 H2BFSP57053 126 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 DEFB131AP59861 70 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 ZNF90Q03938 601 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 BATFQ16520 125 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 IAH1Q2TAA2 248 aaPredicted RBP4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 SCGB1D4Q6XE38 83 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 Q8N377 158 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 C12orf45Q8N5I9 185 aaPredicted RBP4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 ACY3Q96HD9 319 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 C2orf50Q96LR7 162 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 SIGMAR1Q99720 223 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 SEC22CQ9BRL7 303 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 LYRM2Q9NU23 88 aaPredicted RBP4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 DOK5Q9P104 306 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 PAIP2BQ9ULR5 123 aaKnown RBP4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 PSG8Q9UQ74 426 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 HLA-DRB4X5D2U9 266 aa4.1□□□□□ -1.75
TMEM39A-212ENST00000497993 VPS13DQ5THJ4 4388 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 IGHV6-1A0A0B4J1U7 121 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 IGHV3-74A0A0B4J1X5 117 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 ZNF98A6NK75 572 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 KRTAP29-1A8MX34 341 aaPredicted RBP4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 H3BMM0 161 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 DNASE2O00115 360 aaPredicted RBP4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 SSSCA1O60232 199 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 SNRPD3P62318 126 aaKnown RBP4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 RPL23P62829 140 aaKnown RBP4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 DEFB135Q30KP9 77 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 SPANXN5Q5MJ07 72 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 ZNF705AQ6ZN79 300 aaPredicted RBP4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 FOXI2Q6ZQN5 318 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 Q8NAQ8 132 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 OR10P1Q8NGE3 313 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 SHANK2-AS3Q9BTD1 123 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 PAXXQ9BUH6 204 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 KRTAP1-5Q9BYS1 174 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 NMES1Q9C002 83 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 NPVFQ9HCQ7 196 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 PSENENQ9NZ42 101 aa4.09□□□□□ -1.75
TMEM39A-212ENST00000497993 LOC389332A0A1B0GUA5 103 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 NUPR2A6NF83 97 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 ZNF705FA8MVS1 300 aaPredicted RBP4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 H3BP45 60 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 ZNF688P0C7X2 276 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 LINC00869P0C866 280 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 ZNF705DP0CH99 300 aaPredicted RBP4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 ZNF705BP0CI00 300 aaPredicted RBP4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 MIFP14174 115 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 RPL7P18124 248 aaKnown RBP4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 DDTP30046 118 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 TCTAP57738 103 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 LYZP61626 148 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 DAD1P61803 113 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 CYP2G1PQ6ZSU1 146 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 ZNF709Q8N972 641 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 GTSF1Q8WW33 167 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 KCNS1Q96KK3 526 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
TMEM39A-212ENST00000497993 TRAV8-3A0A0A6YYJ7 113 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 IGHV3-66A0A0C4DH42 116 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 A0A0J9YX75 114 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 ZNF705GA8MUZ8 300 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 INMT-MINDY4F8WBC2 141 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 OR5G3P0C626 314 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 METTL15P1P0C7V9 234 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 CTRLP40313 264 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 IFITM2Q01629 132 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 AKR1C1Q04828 323 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 AMTNQ6UX39 209 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 GSG1LQ6UXU4 331 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 PATE2Q6UY27 113 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 OR10G4Q8NGN3 311 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms