RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 RPL32P62910 135 aaKnown RBP3.77□□□□□ -1.81
CSMD3-208ENST00000497026 RPL8P62917 257 aaKnown RBP3.77□□□□□ -1.81
CSMD3-208ENST00000497026 SLC35B1P78383 322 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 HES1Q14469 280 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 LGALS9BQ3B8N2 356 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 RPL39P5Q59GN2 51 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 LGALS9CQ6DKI2 356 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 H2BFWTQ7Z2G1 175 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 MOB3BQ86TA1 216 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 BOD1L2Q8IYS8 172 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 TEX45Q8NA69 505 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 RNF183Q96D59 192 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 NABP2Q9BQ15 211 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 HIGD1BQ9P298 99 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 TP73-AS1Q9UF72 201 aa3.77□□□□□ -1.81
CSMD3-208ENST00000497026 A0A1B0GXF2 115 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 FBLL1A6NHQ2 334 aaKnown RBP3.76□□□□□ -1.81
CSMD3-208ENST00000497026 MOSP00540 346 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 IGKV1-39P01597 117 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 IGHG2P01859 326 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 IGKV1D-39P04432 117 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 FGF6P10767 208 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 HLA-DRB4P13762 266 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 CNTFRP26992 372 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 TAL2Q16559 108 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 C5orf47Q569G3 176 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 Q6ZUT4 128 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.76□□□□□ -1.81
CSMD3-208ENST00000497026 IGF2BP2-AS1Q96M15 143 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 S1PR3Q99500 378 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 SPAG8Q99932 426 aaPredicted RBP3.76□□□□□ -1.81
CSMD3-208ENST00000497026 NAA38Q9BRA0 125 aaKnown RBP3.76□□□□□ -1.81
CSMD3-208ENST00000497026 MRPL32Q9BYC8 188 aaKnown RBP3.76□□□□□ -1.81
CSMD3-208ENST00000497026 LINC00527Q9UJ94 153 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 HLA-DRB4X5D2U9 266 aa3.76□□□□□ -1.81
CSMD3-208ENST00000497026 A0A1B0GUV1 79 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 A0A1B0GWB2 263 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 NCBP2LA6PVI3 153 aaKnown RBP3.75□□□□□ -1.81
CSMD3-208ENST00000497026 C15orf62A8K5M9 175 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 A8MWL6 223 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 FNDC10F2Z333 226 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 H3BMG7 143 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 NDUFA3O95167 84 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 GAS8-AS1O95177 125 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 IGHG4P01861 327 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 MT3P25713 68 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 CAMPP49913 170 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 ERVK-16P61578 105 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 RPL30P62888 115 aaKnown RBP3.75□□□□□ -1.81
CSMD3-208ENST00000497026 NDPQ00604 133 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 PSG5Q15238 335 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 NSUN5P1Q3KNT7 163 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 GCSAMLQ5JQS6 135 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 DGAT2L7PQ6IED9 249 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 NDUFA11Q86Y39 141 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 SMIM20Q8N5G0 67 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 NUP35Q8NFH5 326 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 GTSF1Q8WW33 167 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 PPDPFLQ8WWR9 84 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 CACNG8Q8WXS5 425 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 ARPC1AQ92747 370 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 NDFIP1Q9BT67 221 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 TMEM126AQ9H061 195 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 RPP21Q9H633 154 aaKnown RBP3.75□□□□□ -1.81
CSMD3-208ENST00000497026 UFC1Q9Y3C8 167 aa3.75□□□□□ -1.81
CSMD3-208ENST00000497026 IGHV7-81A0A0B4J1V7 117 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 HIGD1CA8MV81 97 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 E9PLD3 99 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 NBR2O15453 112 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 GAGE7O76087 117 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 IGKV1-16P04430 117 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 FRMD6-AS1P0C7T7 363 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 P0C879 139 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 GAGE12FP0CL80 117 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 GAGE12GP0CL81 117 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 GAGE12IP0CL82 117 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 DEFA4P12838 97 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 NMUP48645 174 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 GAGE4Q13068 117 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 ETDBQ3ZM63 59 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 MIC13Q5XKP0 118 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 NPBQ8NG41 125 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 TMEM190Q8WZ59 177 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 DLX4Q92988 240 aaPredicted RBP3.74□□□□□ -1.81
CSMD3-208ENST00000497026 ZC2HC1AQ96GY0 325 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 MGST2Q99735 147 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 CHAC1Q9BUX1 264 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 GFRA4Q9GZZ7 299 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 MAP1LC3AQ9H492 121 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 ENY2Q9NPA8 101 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 NHP2Q9NX24 153 aaKnown RBP3.74□□□□□ -1.81
CSMD3-208ENST00000497026 SPANXCQ9NY87 97 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 ZNF492Q9P255 531 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 MGAM2Q2M2H8 2515 aa3.74□□□□□ -1.81
CSMD3-208ENST00000497026 FABP5P3A8MUU1 101 aa3.73□□□□□ -1.81
CSMD3-208ENST00000497026 G3V318 75 aa3.73□□□□□ -1.81
CSMD3-208ENST00000497026 PEX7O00628 323 aa3.73□□□□□ -1.81
CSMD3-208ENST00000497026 ATP6V0E1O15342 81 aa3.73□□□□□ -1.81
CSMD3-208ENST00000497026 SNCGO76070 127 aa3.73□□□□□ -1.81
CSMD3-208ENST00000497026 IGLV2-23P01705 113 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms