RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 SNAPC5O75971 98 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 IGLV6-57P01721 117 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 GNG4P50150 75 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 LSM3P62310 102 aaKnown RBP2.32□□□□□ -2.04
SNX13-211ENST00000496855 MUCL1Q96DR8 90 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 AGPAT4-IT1Q9H0P7 198 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 PZPP20742 1482 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 MAST1Q9Y2H9 1570 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 COL4A5P29400 1685 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 CLTCQ00610 1675 aaKnown RBP2.32□□□□□ -2.04
SNX13-211ENST00000496855 QRICH2Q9H0J4 1663 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 ZDBF2Q9HCK1 2354 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 LTBP2Q14767 1821 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 ABCC3O15438 1527 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 ANKRD17O75179 2603 aaKnown RBP2.31□□□□□ -2.04
SNX13-211ENST00000496855 DIP2CQ9Y2E4 1556 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 C3orf85A0A1B0GTC6 90 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 TCRBV4S1A1TA0A5B7 111 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 PROSCO94903 275 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 RBP4P02753 201 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 S100A8P05109 93 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 PPP3R1P63098 170 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 ASB16-AS1Q495Z4 193 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 TEX261Q6UWH6 196 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 FP248Q71RG6 208 aaPredicted RBP2.31□□□□□ -2.04
SNX13-211ENST00000496855 CLECL1Q8IZS7 167 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 ATOH7Q8N100 152 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 Q96M85 177 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 NCKAP5O14513 1909 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 HELZP42694 1942 aaKnown RBP2.31□□□□□ -2.04
SNX13-211ENST00000496855 GCN1Q92616 2671 aaKnown RBP2.31□□□□□ -2.04
SNX13-211ENST00000496855 LAMA3Q16787 3333 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 PREX2Q70Z35 1606 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 MUC4Q99102 2169 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 DISP1Q96F81 1524 aa2.31□□□□□ -2.04
SNX13-211ENST00000496855 ALPK3Q96L96 1907 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 MYOM2P54296 1465 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 COL4A2P08572 1712 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 TRAV10A0A0B4J240 114 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 IGHV1-24A0A0C4DH33 117 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 E7EQL1 145 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 CATR1Q13166 79 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 PDE6HQ13956 83 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 ATP11AUNQ6ZP68 121 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 FOXI2Q6ZQN5 318 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 KRTAP13-1Q8IUC0 172 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 KCNRGQ8N5I3 272 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 LINC00304Q8N9R0 145 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 ABCA10Q8WWZ4 1543 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 CEP290O15078 2479 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 CFAP74Q9C0B2 1584 aa2.3□□□□□ -2.04
SNX13-211ENST00000496855 PRDM15P57071 1507 aaPredicted RBP2.29□□□□□ -2.04
SNX13-211ENST00000496855 IFITM5A6NNB3 132 aa2.29□□□□□ -2.04
SNX13-211ENST00000496855 ETV6P41212 452 aa2.29□□□□□ -2.04
SNX13-211ENST00000496855 MIR22HGQ0VDD5 57 aa2.29□□□□□ -2.04
SNX13-211ENST00000496855 Q1T7F1 81 aa2.29□□□□□ -2.04
SNX13-211ENST00000496855 NCMAPQ5T1S8 102 aa2.29□□□□□ -2.04
SNX13-211ENST00000496855 TMEM254Q8TBM7 123 aa2.29□□□□□ -2.04
SNX13-211ENST00000496855 MRPL57Q9BQC6 102 aaKnown RBP2.29□□□□□ -2.04
SNX13-211ENST00000496855 SAR1AQ9NR31 198 aa2.29□□□□□ -2.04
SNX13-211ENST00000496855 USP34Q70CQ2 3546 aa2.29□□□□□ -2.04
SNX13-211ENST00000496855 SAMD9LQ8IVG5 1584 aa2.29□□□□□ -2.04
SNX13-211ENST00000496855 SPTBN4Q9H254 2564 aa2.29□□□□□ -2.04
SNX13-211ENST00000496855 DNAH12Q6ZR08 3092 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 PNMA8CA0A1B0GUJ8 204 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 KLF7O75840 302 aaPredicted RBP2.28□□□□□ -2.04
SNX13-211ENST00000496855 CNBPP62633 177 aaKnown RBP2.28□□□□□ -2.04
SNX13-211ENST00000496855 ZNF833PQ6ZTB9 187 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 ATP6V0E2Q8NHE4 81 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 SFT2D1Q8WV19 159 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 TVP23CQ96ET8 276 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 RERGLQ9H628 205 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 NAIPQ13075 1403 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 PXDNLA1KZ92 1463 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 DCHS1Q96JQ0 3298 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 BPTFQ12830 3046 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 SHROOM3Q8TF72 1996 aa2.28□□□□□ -2.04
SNX13-211ENST00000496855 TNRC6CQ9HCJ0 1690 aaKnown RBP2.28□□□□□ -2.04
SNX13-211ENST00000496855 SCN3AQ9NY46 2000 aa2.27□□□□□ -2.05
SNX13-211ENST00000496855 ZNF736B4DX44 427 aaPredicted RBP2.27□□□□□ -2.05
SNX13-211ENST00000496855 EDF1O60869 148 aaKnown RBP2.27□□□□□ -2.05
SNX13-211ENST00000496855 LINC01545Q5VT33 79 aa2.27□□□□□ -2.05
SNX13-211ENST00000496855 TAS2R8Q9NYW2 309 aa2.27□□□□□ -2.05
SNX13-211ENST00000496855 IER3IP1Q9Y5U9 82 aa2.27□□□□□ -2.05
SNX13-211ENST00000496855 ABCA6Q8N139 1617 aa2.27□□□□□ -2.05
SNX13-211ENST00000496855 MROH1Q8NDA8 1641 aa2.27□□□□□ -2.05
SNX13-211ENST00000496855 ASXL1Q8IXJ9 1541 aa2.27□□□□□ -2.05
SNX13-211ENST00000496855 WDFY4Q6ZS81 3184 aa2.27□□□□□ -2.05
SNX13-211ENST00000496855 PTPN13Q12923 2485 aa2.27□□□□□ -2.05
SNX13-211ENST00000496855 FREM3P0C091 2139 aa2.27□□□□□ -2.05
SNX13-211ENST00000496855 TMEM218A2RU14 115 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 HYPMO75409 117 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 ERC2-IT1O76042 136 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 TNFP01375 233 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 TPPP2P59282 170 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 HSD52Q0P140 79 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 BRD3OSQ6XYD6 125 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 Q6ZS92 163 aa2.26□□□□□ -2.05
SNX13-211ENST00000496855 GKN2Q86XP6 184 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms