RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 RPL26L1Q9UNX3 145 aaKnown RBP2.21□□□□□ -2.06
GTF3A-208ENST00000493903 MED31Q9Y3C7 131 aa2.21□□□□□ -2.06
GTF3A-208ENST00000493903 NBEAL1Q6ZS30 2694 aa2.21□□□□□ -2.06
GTF3A-208ENST00000493903 JMJD1CQ15652 2540 aa2.21□□□□□ -2.06
GTF3A-208ENST00000493903 NCOA6Q14686 2063 aaPredicted RBP2.21□□□□□ -2.06
GTF3A-208ENST00000493903 COL6A5A8TX70 2615 aa2.21□□□□□ -2.06
GTF3A-208ENST00000493903 ATRQ13535 2644 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 ZNF705FA8MVS1 300 aaPredicted RBP2.2□□□□□ -2.06
GTF3A-208ENST00000493903 PMP2P02689 132 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 SHBGP04278 402 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 DYNLT1P63172 113 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 RHOGP84095 191 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 SPANXN5Q5MJ07 72 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 EIF5AL1Q6IS14 154 aaKnown RBP2.2□□□□□ -2.06
GTF3A-208ENST00000493903 PDZD9Q8IXQ8 264 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 C3orf56Q8N813 242 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 SLC30A7Q8NEW0 376 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 ADAT1Q9BUB4 502 aaKnown RBP2.2□□□□□ -2.06
GTF3A-208ENST00000493903 OR2H1Q9GZK4 316 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 TAS2R4Q9NYW5 299 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 JPT1Q9UK76 154 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 CSPG4Q6UVK1 2322 aa2.2□□□□□ -2.06
GTF3A-208ENST00000493903 HRNRQ86YZ3 2850 aaPredicted RBP2.2□□□□□ -2.06
GTF3A-208ENST00000493903 CACNA1CQ13936 2221 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 TRGV4A0A0C4DH28 118 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 A0A0G2JQZ4 141 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 A0A1B0GX51 115 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 IBA57-AS1B1ANH7 110 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 H7BYZ3 331 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 J3KT08 172 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 PGLYRP1O75594 196 aaPredicted RBP2.19□□□□□ -2.06
GTF3A-208ENST00000493903 CST7O76096 145 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 DHFRP00374 187 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 RPL7P18124 248 aaKnown RBP2.19□□□□□ -2.06
GTF3A-208ENST00000493903 SDC4P31431 198 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 S100A11P31949 105 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 AQP4P55087 323 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 KRTAP10-8P60410 259 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 MAXP61244 160 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 SMCO1Q147U7 214 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 PHF5AQ7RTV0 110 aaKnown RBP2.19□□□□□ -2.06
GTF3A-208ENST00000493903 LRRC28Q86X40 367 aaPredicted RBP2.19□□□□□ -2.06
GTF3A-208ENST00000493903 MAFIPQ8WZ33 124 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 SMR3AQ99954 134 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 TIMM21Q9BVV7 248 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 NPCDR1Q9BY65 106 aa2.19□□□□□ -2.06
GTF3A-208ENST00000493903 MAP1AP78559 2803 aaPredicted RBP2.19□□□□□ -2.06
GTF3A-208ENST00000493903 MXRA5Q9NR99 2828 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 ZGRF1Q86YA3 2104 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 CUBNO60494 3623 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 BORCS7-ASMTA0A0B4J1R7 106 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 A8MWV9 139 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 OVOL1O14753 267 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 DEGS1O15121 323 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 ARPC5O15511 151 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 HMGN1P05114 100 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 BAALC-AS2P0C853 105 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 RPS3P23396 243 aaKnown RBP eCLIP2.18□□□□□ -2.06
GTF3A-208ENST00000493903 FKBP2P26885 142 aaKnown RBP2.18□□□□□ -2.06
GTF3A-208ENST00000493903 SPINT3P49223 89 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 PSG9Q00887 426 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 TFF3Q07654 80 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 TPRXLQ17RH7 258 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 ZNF181Q2M3W8 571 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 SNRNP25Q9BV90 132 aaKnown RBP2.18□□□□□ -2.06
GTF3A-208ENST00000493903 BCL2L10Q9HD36 194 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 OTORQ9NRC9 128 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 LHFPL6Q9Y693 200 aa2.18□□□□□ -2.06
GTF3A-208ENST00000493903 NCKAP5O14513 1909 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 SPTBP11277 2137 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 MYO7BQ6PIF6 2116 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 A0A087WX48 190 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 MEIKINA0A087WXM9 373 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 TRAV17A0A0B4J275 112 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 HIST1H2BKO60814 126 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 IFNA4P05014 189 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 IGKV4-1P06312 121 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 HIST1H2BJP06899 126 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 CXCL1P09341 107 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 MIFP14174 115 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 TMBIM6P55061 237 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 HBBP68871 147 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 SLC38A11Q08AI6 406 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 SOSTDC1Q6X4U4 206 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 LINC00471Q8N535 108 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 PSMF1Q92530 271 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 MCEEQ96PE7 176 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 NAT8BQ9UHF3 227 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 OBSCNQ5VST9 7968 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 DOCK10Q96BY6 2186 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 ABCA4P78363 2273 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 ZANQ9Y493 2812 aa2.17□□□□□ -2.06
GTF3A-208ENST00000493903 RYR3Q15413 4870 aa2.16□□□□□ -2.06
GTF3A-208ENST00000493903 MDC1Q14676 2089 aaKnown RBP2.16□□□□□ -2.06
GTF3A-208ENST00000493903 AKAP6Q13023 2319 aa2.16□□□□□ -2.06
GTF3A-208ENST00000493903 IGKV1D-42A0A075B6H8 117 aa2.16□□□□□ -2.06
GTF3A-208ENST00000493903 TRAV36DV7A0A075B6V5 113 aa2.16□□□□□ -2.06
GTF3A-208ENST00000493903 ODAMA1E959 279 aa2.16□□□□□ -2.06
GTF3A-208ENST00000493903 H3BRN7 92 aa2.16□□□□□ -2.06
GTF3A-208ENST00000493903 GABARAPH6UMI1 98 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms