RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 SLC25A16P16260 332 aa8.42□□□□□ -1.06
SNED1-211ENST00000491761 LY6G5BQ8NDX9 201 aa8.42□□□□□ -1.06
SNED1-211ENST00000491761 FAM104BQ5XKR9 115 aa8.42□□□□□ -1.06
SNED1-211ENST00000491761 ZFAND6Q6FIF0 208 aa8.42□□□□□ -1.06
SNED1-211ENST00000491761 DLX4Q92988 240 aaPredicted RBP8.42□□□□□ -1.06
SNED1-211ENST00000491761 C9orf118A6NHY6 69 aa8.42□□□□□ -1.06
SNED1-211ENST00000491761 PLNP26678 52 aa8.42□□□□□ -1.06
SNED1-211ENST00000491761 RBX1P62877 108 aa8.42□□□□□ -1.06
SNED1-211ENST00000491761 CENPEQ02224 2701 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 TRAV8-3A0A0A6YYJ7 113 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 TRBV6-1A0A0K0K1D8 114 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 B4DSR2 109 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 G3V318 75 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 COX8AP10176 69 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 SAA4P35542 130 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 Q8N976 141 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 NDUFB8O95169 186 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 HTN3P15516 51 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 ANKRD39Q53RE8 183 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 ARHGAP32A7KAX9 2087 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 F8P00451 2351 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 VWC2LB2RUY7 222 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 IGHV3-53P01767 116 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 ATP6V0BQ99437 205 aa8.41□□□□□ -1.06
SNED1-211ENST00000491761 TEX48A0A1B0GUV7 120 aa8.4□□□□□ -1.06
SNED1-211ENST00000491761 CTRLP40313 264 aa8.4□□□□□ -1.06
SNED1-211ENST00000491761 PHLDA1Q8WV24 401 aaPredicted RBP8.4□□□□□ -1.06
SNED1-211ENST00000491761 TRAV8-4A0A0B4J246 113 aa8.4□□□□□ -1.06
SNED1-211ENST00000491761 IGLV11-55A0A075B6I3 123 aa8.4□□□□□ -1.07
SNED1-211ENST00000491761 WI2-2373I1.2A0A1W2PRP0 233 aa8.4□□□□□ -1.07
SNED1-211ENST00000491761 MSRB1Q9NZV6 116 aa8.4□□□□□ -1.07
SNED1-211ENST00000491761 ADARB2-AS1A8MUL3 147 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 RS1O15537 224 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 VGLL1Q99990 258 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 CSMD1Q96PZ7 3565 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 C2orf82Q6UX34 121 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 CFHR4Q92496 578 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 SPAG8Q99932 426 aaPredicted RBP8.39□□□□□ -1.07
SNED1-211ENST00000491761 DSPP15924 2871 aaKnown RBP8.39□□□□□ -1.07
SNED1-211ENST00000491761 USP24Q9UPU5 2620 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 C2orf70A6NJV1 201 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 H3BRM9 83 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 OVOL1O14753 267 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 M0R2P5 195 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 C2orf66Q6UXQ4 117 aa8.39□□□□□ -1.07
SNED1-211ENST00000491761 A0A1W2PPM0 123 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 OVOL3O00110 214 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 IGLV2-11P01706 119 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 ADORA2A-AS1P86434 159 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 ZNF747Q9BV97 191 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 SMPXQ9UHP9 88 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 TMEM101Q96IK0 257 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 FANCD2OSQ96PS1 177 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 TRAV13-1A0A0B4J241 112 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 C16orf54Q6UWD8 224 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 STHQ8IWL8 128 aa8.38□□□□□ -1.07
SNED1-211ENST00000491761 GAGE12HA6NDE8 117 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 ODF3BA8MYP8 253 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 DUSP14O95147 198 aaKnown RBP8.37□□□□□ -1.07
SNED1-211ENST00000491761 RHPN1-AS1Q9BWJ2 59 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 MGAM2Q2M2H8 2515 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 K7EP34 96 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 HLA-DRB4P13762 266 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 RNASE13Q5GAN3 156 aaKnown RBP8.37□□□□□ -1.07
SNED1-211ENST00000491761 C9orf139Q6ZV77 190 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 ZNF48Q96MX3 618 aaPredicted RBP8.37□□□□□ -1.07
SNED1-211ENST00000491761 PRR25Q96S07 402 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 HLA-DRB4X5D2U9 266 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 PRADC1Q9BSG0 188 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 PEMTQ9UBM1 199 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 TP53TG1Q9Y2A0 90 aa8.37□□□□□ -1.07
SNED1-211ENST00000491761 TRBV20-1A0A075B6N2 111 aa8.36□□□□□ -1.07
SNED1-211ENST00000491761 ATP6V0E1O15342 81 aa8.36□□□□□ -1.07
SNED1-211ENST00000491761 DEFB125Q8N687 156 aa8.36□□□□□ -1.07
SNED1-211ENST00000491761 DPH3P1Q9H4G8 78 aa8.36□□□□□ -1.07
SNED1-211ENST00000491761 LAMA5O15230 3695 aa8.36□□□□□ -1.07
SNED1-211ENST00000491761 HOXB4P17483 251 aaPredicted RBP8.36□□□□□ -1.07
SNED1-211ENST00000491761 DSCR9P59020 149 aa8.36□□□□□ -1.07
SNED1-211ENST00000491761 DTX2Q86UW9 622 aa8.36□□□□□ -1.07
SNED1-211ENST00000491761 GATD1Q8NB37 220 aa8.36□□□□□ -1.07
SNED1-211ENST00000491761 FAM110DQ8TAY7 271 aaPredicted RBP8.36□□□□□ -1.07
SNED1-211ENST00000491761 SS18L2Q9UHA2 77 aa8.36□□□□□ -1.07
SNED1-211ENST00000491761 HIST1H4AP62805 103 aaKnown RBP8.35□□□□□ -1.07
SNED1-211ENST00000491761 UBE2E2Q96LR5 201 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 F6UB75 175 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 UBE2E1P51965 193 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 LINC00158P58513 81 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 WFDC2Q14508 124 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 PIP4P2Q8N4L2 257 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 TRAV12-2A0A075B6T6 113 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 IGHV3-16A0A0C4DH30 117 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 CTSGP08311 255 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 TRAV26-1A0A087WT03 109 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 TRBV7-1A0A0A6YYK4 115 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 IGHV7-81A0A0B4J1V7 117 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
SNED1-211ENST00000491761 EGR2P11161 476 aaPredicted RBP8.34□□□□□ -1.07
SNED1-211ENST00000491761 BOD1L1Q8NFC6 3051 aa8.34□□□□□ -1.07
SNED1-211ENST00000491761 TRGV4A0A0C4DH28 118 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms