RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 NFE4Q86UQ8 179 aa12.17□□□□□ -0.46
HMGN1-219ENST00000491183 MSRB1Q9NZV6 116 aa12.17□□□□□ -0.46
HMGN1-219ENST00000491183 DNAH5Q8TE73 4624 aa12.16□□□□□ -0.46
HMGN1-219ENST00000491183 MAP1LC3B2A6NCE7 125 aa12.16□□□□□ -0.46
HMGN1-219ENST00000491183 K7EP13 123 aa12.16□□□□□ -0.46
HMGN1-219ENST00000491183 PPT1P50897 306 aa12.16□□□□□ -0.46
HMGN1-219ENST00000491183 Q86TA4 180 aa12.16□□□□□ -0.46
HMGN1-219ENST00000491183 MAPKAPK5-AS1Q8N8E1 139 aa12.16□□□□□ -0.46
HMGN1-219ENST00000491183 HIST1H2BAQ96A08 127 aa12.16□□□□□ -0.46
HMGN1-219ENST00000491183 NKX6-2Q9C056 277 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-219ENST00000491183 MAP1LC3BQ9GZQ8 125 aa12.16□□□□□ -0.46
HMGN1-219ENST00000491183 APOBP04114 4563 aaKnown RBP12.15□□□□□ -0.46
HMGN1-219ENST00000491183 FHITP49789 147 aa12.15□□□□□ -0.46
HMGN1-219ENST00000491183 RHOHQ15669 191 aa12.15□□□□□ -0.46
HMGN1-219ENST00000491183 Q6ZSN1 163 aa12.15□□□□□ -0.46
HMGN1-219ENST00000491183 ZC2HC1AQ96GY0 325 aa12.15□□□□□ -0.46
HMGN1-219ENST00000491183 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.46
HMGN1-219ENST00000491183 A0A087WTM6 91 aa12.14□□□□□ -0.47
HMGN1-219ENST00000491183 CRYGDP07320 174 aa12.14□□□□□ -0.47
HMGN1-219ENST00000491183 ERVFC1-1P60608 527 aa12.14□□□□□ -0.47
HMGN1-219ENST00000491183 COX8CQ7Z4L0 72 aa12.14□□□□□ -0.47
HMGN1-219ENST00000491183 KCNRGQ8N5I3 272 aa12.14□□□□□ -0.47
HMGN1-219ENST00000491183 PARLQ9H300 379 aa12.14□□□□□ -0.47
HMGN1-219ENST00000491183 PGPEP1Q9NXJ5 209 aa12.14□□□□□ -0.47
HMGN1-219ENST00000491183 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
HMGN1-219ENST00000491183 S100A4P26447 101 aaKnown RBP12.13□□□□□ -0.47
HMGN1-219ENST00000491183 ASIPP42127 132 aa12.13□□□□□ -0.47
HMGN1-219ENST00000491183 OR11H4Q8NGC9 324 aa12.13□□□□□ -0.47
HMGN1-219ENST00000491183 JPT2Q9H910 190 aa12.13□□□□□ -0.47
HMGN1-219ENST00000491183 KRBOX1C9JBD0 128 aa12.12□□□□□ -0.47
HMGN1-219ENST00000491183 EREGO14944 169 aa12.12□□□□□ -0.47
HMGN1-219ENST00000491183 MGST1P10620 155 aaKnown RBP12.12□□□□□ -0.47
HMGN1-219ENST00000491183 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
HMGN1-219ENST00000491183 DNLZQ5SXM8 178 aa12.12□□□□□ -0.47
HMGN1-219ENST00000491183 IL36BQ9NZH7 164 aa12.12□□□□□ -0.47
HMGN1-219ENST00000491183 ZFP30Q9Y2G7 519 aa12.12□□□□□ -0.47
HMGN1-219ENST00000491183 A8MWV9 139 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 B4DEV8 164 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 SH2D1AO60880 128 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 ZNF345Q14585 488 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 LGALSLQ3ZCW2 172 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-219ENST00000491183 LINC01556Q5JQF7 62 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 CST9LP1Q5W188 147 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 ZFP2Q6ZN57 461 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 C10orf126Q8N4M7 172 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 ATP6V0E2Q8NHE4 81 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 STOML3Q8TAV4 291 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 FMC1Q96HJ9 113 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 SAMD10Q9BYL1 202 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 Q9UF83 564 aa12.11□□□□□ -0.47
HMGN1-219ENST00000491183 TRBV6-1A0A0K0K1D8 114 aa12.1□□□□□ -0.47
HMGN1-219ENST00000491183 GRIFINA4D1Z8 144 aa12.1□□□□□ -0.47
HMGN1-219ENST00000491183 M0R036 132 aa12.1□□□□□ -0.47
HMGN1-219ENST00000491183 ARMS2P0C7Q2 107 aa12.1□□□□□ -0.47
HMGN1-219ENST00000491183 SEC11BP0C7V7 166 aa12.1□□□□□ -0.47
HMGN1-219ENST00000491183 LELP1Q5T871 98 aa12.1□□□□□ -0.47
HMGN1-219ENST00000491183 UFSP1Q6NVU6 142 aa12.1□□□□□ -0.47
HMGN1-219ENST00000491183 Q8N1X5 172 aa12.1□□□□□ -0.47
HMGN1-219ENST00000491183 MBD3L1Q8WWY6 194 aa12.1□□□□□ -0.47
HMGN1-219ENST00000491183 TRAV8-6A0A0B4J262 113 aa12.09□□□□□ -0.47
HMGN1-219ENST00000491183 HMSDA8MTL9 139 aa12.09□□□□□ -0.47
HMGN1-219ENST00000491183 IBA57-AS1B1ANH7 110 aa12.09□□□□□ -0.47
HMGN1-219ENST00000491183 H3BVH4 76 aa12.09□□□□□ -0.47
HMGN1-219ENST00000491183 PAGE4O60829 102 aa12.09□□□□□ -0.47
HMGN1-219ENST00000491183 UBE2G1P62253 170 aa12.09□□□□□ -0.47
HMGN1-219ENST00000491183 ZNF674Q2M3X9 581 aa12.09□□□□□ -0.47
HMGN1-219ENST00000491183 OR10J3Q5JRS4 329 aa12.09□□□□□ -0.47
HMGN1-219ENST00000491183 GTSF1LQ9H1H1 148 aa12.09□□□□□ -0.47
HMGN1-219ENST00000491183 GAGE12JA6NER3 117 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 LTAP01374 205 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 LINC00694P0DN24 101 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 GAGE1Q13065 139 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 GAGE4Q13068 117 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 GAGE5Q13069 117 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 GAGE13Q4V321 117 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 FAM162BQ5T6X4 162 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 CDPF1Q6NVV7 123 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 FAM213BQ8TBF2 198 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 SFT2D1Q8WV19 159 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 TCEAL7Q9BRU2 100 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 SCRT2Q9NQ03 307 aa12.08□□□□□ -0.48
HMGN1-219ENST00000491183 A0A0D9SG52 128 aa12.07□□□□□ -0.48
HMGN1-219ENST00000491183 IGHV3-30P01768 117 aa12.07□□□□□ -0.48
HMGN1-219ENST00000491183 IGHV3-33P01772 117 aa12.07□□□□□ -0.48
HMGN1-219ENST00000491183 IGHV3-30-3P0DP02 117 aa12.07□□□□□ -0.48
HMGN1-219ENST00000491183 IGHV3-30-5P0DP03 117 aa12.07□□□□□ -0.48
HMGN1-219ENST00000491183 C14orf178Q8N769 122 aaPredicted RBP12.07□□□□□ -0.48
HMGN1-219ENST00000491183 TMSB15BA0A087X1C1 80 aa12.06□□□□□ -0.48
HMGN1-219ENST00000491183 A0A1B0GV50 99 aa12.06□□□□□ -0.48
HMGN1-219ENST00000491183 UMAD1C9J7I0 102 aa12.06□□□□□ -0.48
HMGN1-219ENST00000491183 AKR1C3P42330 323 aa12.06□□□□□ -0.48
HMGN1-219ENST00000491183 ZNF471Q9BX82 626 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-219ENST00000491183 BOLA1Q9Y3E2 137 aa12.06□□□□□ -0.48
HMGN1-219ENST00000491183 LRCOL1A6NCL2 159 aa12.05□□□□□ -0.48
HMGN1-219ENST00000491183 BCL2L11O43521 198 aa12.05□□□□□ -0.48
HMGN1-219ENST00000491183 KRTAP10-1P60331 282 aa12.05□□□□□ -0.48
HMGN1-219ENST00000491183 LINC01559Q495D7 138 aa12.05□□□□□ -0.48
HMGN1-219ENST00000491183 Q8N3U1 123 aa12.05□□□□□ -0.48
HMGN1-219ENST00000491183 SYT8Q8NBV8 401 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms