RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 COL5A1P20908 1838 aaPredicted RBP9.95□□□□□ -0.82
SHOX2-205ENST00000490689 GRNP28799 593 aaKnown RBP9.95□□□□□ -0.82
SHOX2-205ENST00000490689 IGLV11-55A0A075B6I3 123 aa9.94□□□□□ -0.82
SHOX2-205ENST00000490689 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
SHOX2-205ENST00000490689 J3QQQ9 107 aa9.94□□□□□ -0.82
SHOX2-205ENST00000490689 ATXN8Q156A1 80 aa9.94□□□□□ -0.82
SHOX2-205ENST00000490689 CLUHP3Q96NS8 147 aa9.94□□□□□ -0.82
SHOX2-205ENST00000490689 C8orf31Q8N9H6 132 aa9.94□□□□□ -0.82
SHOX2-205ENST00000490689 DUX3Q96PT4 197 aa9.94□□□□□ -0.82
SHOX2-205ENST00000490689 RPL39P62891 51 aaKnown RBP9.94□□□□□ -0.82
SHOX2-205ENST00000490689 C19orf54Q5BKX5 351 aa9.94□□□□□ -0.82
SHOX2-205ENST00000490689 FANCD2OSQ96PS1 177 aa9.94□□□□□ -0.82
SHOX2-205ENST00000490689 DUX5Q96PT3 197 aa9.94□□□□□ -0.82
SHOX2-205ENST00000490689 USP9XQ93008 2570 aaPredicted RBP9.94□□□□□ -0.82
SHOX2-205ENST00000490689 FRYQ5TBA9 3013 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 E9PLD3 99 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.93□□□□□ -0.82
SHOX2-205ENST00000490689 WI2-2373I1.2A0A1W2PRP0 233 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 MT-ATP8P03928 68 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 UFSP1Q6NVU6 142 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 OR13C6PQ8NH95 151 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 DYNLRB2Q8TF09 96 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 LINC00574Q9H8X3 128 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 TRBV7-1A0A0A6YYK4 115 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 M0R1W7 72 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 KLK9Q9UKQ9 250 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 SHISA9B4DS77 424 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 SCGB1A1P11684 91 aa9.93□□□□□ -0.82
SHOX2-205ENST00000490689 FAM110DQ8TAY7 271 aaPredicted RBP9.93□□□□□ -0.82
SHOX2-205ENST00000490689 ZNF48Q96MX3 618 aaPredicted RBP9.93□□□□□ -0.82
SHOX2-205ENST00000490689 BUB3O43684 328 aa9.92□□□□□ -0.82
SHOX2-205ENST00000490689 DNAL4O96015 105 aa9.92□□□□□ -0.82
SHOX2-205ENST00000490689 LGALS1P09382 135 aaKnown RBP9.92□□□□□ -0.82
SHOX2-205ENST00000490689 FRYLO94915 3013 aa9.92□□□□□ -0.82
SHOX2-205ENST00000490689 MINOS1Q5TGZ0 78 aa9.92□□□□□ -0.82
SHOX2-205ENST00000490689 C3orf56Q8N813 242 aa9.92□□□□□ -0.82
SHOX2-205ENST00000490689 TIMM21Q9BVV7 248 aa9.92□□□□□ -0.82
SHOX2-205ENST00000490689 MINOS1-NBL1R4GNA1 71 aa9.92□□□□□ -0.82
SHOX2-205ENST00000490689 PHLDA1Q8WV24 401 aaPredicted RBP9.92□□□□□ -0.82
SHOX2-205ENST00000490689 A4D1N5 150 aa9.91□□□□□ -0.82
SHOX2-205ENST00000490689 TEN1Q86WV5 123 aa9.91□□□□□ -0.82
SHOX2-205ENST00000490689 PLEKHB2Q96CS7 222 aa9.91□□□□□ -0.82
SHOX2-205ENST00000490689 DSPP15924 2871 aaKnown RBP9.91□□□□□ -0.82
SHOX2-205ENST00000490689 IGHV7-81A0A0B4J1V7 117 aa9.91□□□□□ -0.82
SHOX2-205ENST00000490689 A0A096LNJ9 63 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 H3BUX3 64 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 SPINK13Q1W4C9 94 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 ANKRD29Q8N6D5 301 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 TM2D2Q9BX73 214 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 C11orf86A6NJI1 115 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 IGLC6P0CF74 106 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 BPESC1Q9GZL8 116 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 ATP5J2P56134 94 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 PLA2G2CQ5R387 149 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 RNF183Q96D59 192 aa9.9□□□□□ -0.82
SHOX2-205ENST00000490689 PTPRBP23467 1997 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 OOSP1A8MZH6 123 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 H3BMM0 161 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 TRPT1Q86TN4 253 aaKnown RBP9.89□□□□□ -0.83
SHOX2-205ENST00000490689 C15orf53Q8NAA6 179 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 BAALCQ8WXS3 180 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 UBE2WQ96B02 151 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 MOB4Q9Y3A3 225 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 TRBV6-1A0A0K0K1D8 114 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 IGF1P05019 195 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 ITLN2Q8WWU7 325 aaPredicted RBP9.89□□□□□ -0.83
SHOX2-205ENST00000490689 RNF185Q96GF1 192 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 LINC01587Q99440 93 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 JPT2Q9H910 190 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 CFC1P0CG37 223 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 IGFL2Q6UWQ7 119 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 GAGE5Q13069 117 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 GAGE6Q13070 117 aa9.89□□□□□ -0.83
SHOX2-205ENST00000490689 UBE2L6O14933 153 aa9.88□□□□□ -0.83
SHOX2-205ENST00000490689 IFITM1P13164 125 aa9.88□□□□□ -0.83
SHOX2-205ENST00000490689 SMIM20Q8N5G0 67 aa9.88□□□□□ -0.83
SHOX2-205ENST00000490689 OPRPNQ99935 248 aaPredicted RBP9.88□□□□□ -0.83
SHOX2-205ENST00000490689 GAGE12JA6NER3 117 aa9.88□□□□□ -0.83
SHOX2-205ENST00000490689 GAGE7O76087 117 aa9.88□□□□□ -0.83
SHOX2-205ENST00000490689 GAGE12FP0CL80 117 aa9.88□□□□□ -0.83
SHOX2-205ENST00000490689 GAGE12GP0CL81 117 aa9.88□□□□□ -0.83
SHOX2-205ENST00000490689 GAGE12IP0CL82 117 aa9.88□□□□□ -0.83
SHOX2-205ENST00000490689 GAGE4Q13068 117 aa9.88□□□□□ -0.83
SHOX2-205ENST00000490689 MYO15AQ9UKN7 3530 aa9.88□□□□□ -0.83
SHOX2-205ENST00000490689 IGFL3Q6UXB1 125 aa9.87□□□□□ -0.83
SHOX2-205ENST00000490689 Q6ZQT7 251 aa9.87□□□□□ -0.83
SHOX2-205ENST00000490689 TRBV7-9A0A0J9YWB2 115 aa9.87□□□□□ -0.83
SHOX2-205ENST00000490689 ABCA2Q9BZC7 2435 aa9.87□□□□□ -0.83
SHOX2-205ENST00000490689 USP34Q70CQ2 3546 aa9.87□□□□□ -0.83
SHOX2-205ENST00000490689 TCL1BO95988 128 aa9.87□□□□□ -0.83
SHOX2-205ENST00000490689 IGHV3-38A0A0C4DH36 116 aa9.86□□□□□ -0.83
SHOX2-205ENST00000490689 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
SHOX2-205ENST00000490689 Q6ZUT4 128 aa9.86□□□□□ -0.83
SHOX2-205ENST00000490689 FSTL3O95633 263 aa9.86□□□□□ -0.83
SHOX2-205ENST00000490689 HHLA3Q9XRX5 114 aa9.86□□□□□ -0.83
SHOX2-205ENST00000490689 MUSTN1Q8IVN3 82 aa9.86□□□□□ -0.83
SHOX2-205ENST00000490689 NDUFA12Q9UI09 145 aa9.86□□□□□ -0.83
SHOX2-205ENST00000490689 U3KQK5 164 aa9.86□□□□□ -0.83
SHOX2-205ENST00000490689 TRAV13-1A0A0B4J241 112 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms