RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 HCFC1P51610 2035 aa11.09□□□□□ -0.63
ARHGEF39-205ENST00000490638 LY6LH3BQJ8 138 aa11.09□□□□□ -0.63
ARHGEF39-205ENST00000490638 A0A096LPF7 62 aa11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 CHCHD1Q96BP2 118 aaKnown RBP11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 GNRH2O43555 120 aa11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 DPM2O94777 84 aa11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 SHISA2Q6UWI4 295 aa11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 MBD6Q96DN6 1003 aa11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 NDUFA11Q86Y39 141 aa11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 C14orf144Q96I85 54 aa11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 U3KQE9 123 aa11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 ZNF292O60281 2723 aa11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 CFAP46Q8IYW2 2715 aa11.08□□□□□ -0.64
ARHGEF39-205ENST00000490638 IGHV3-64A0A075B6Q5 118 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 PRSS46E5RG02 174 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 TNFRSF6BO95407 300 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 RNASE1P07998 156 aaKnown RBP11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 CKS1BP61024 79 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 SEC11AP67812 179 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 SLAQ13239 276 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 GTF2H5Q6ZYL4 71 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 CHTOPQ9Y3Y2 248 aaKnown RBP11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 HILS1P60008 231 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 DEFB135Q30KP9 77 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 MORN3Q6PF18 240 aaPredicted RBP11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 C10orf99Q6UWK7 81 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 ZNF493Q6ZR52 646 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 LINC01006Q8NI28 216 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 COL4A2P08572 1712 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 A0A0J9YY99 117 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 DEFB1P60022 68 aa11.07□□□□□ -0.64
ARHGEF39-205ENST00000490638 SDHAF1A6NFY7 115 aa11.06□□□□□ -0.64
ARHGEF39-205ENST00000490638 CCDC140Q96MF4 163 aa11.06□□□□□ -0.64
ARHGEF39-205ENST00000490638 ATRQ13535 2644 aa11.06□□□□□ -0.64
ARHGEF39-205ENST00000490638 IGHV3-38A0A0C4DH36 116 aa11.06□□□□□ -0.64
ARHGEF39-205ENST00000490638 WI2-2373I1.2A0A1W2PRP0 233 aa11.06□□□□□ -0.64
ARHGEF39-205ENST00000490638 ASPHD1Q5U4P2 390 aa11.06□□□□□ -0.64
ARHGEF39-205ENST00000490638 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
ARHGEF39-205ENST00000490638 M0R2P5 195 aa11.06□□□□□ -0.64
ARHGEF39-205ENST00000490638 FAM104BQ5XKR9 115 aa11.06□□□□□ -0.64
ARHGEF39-205ENST00000490638 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
ARHGEF39-205ENST00000490638 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
ARHGEF39-205ENST00000490638 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
ARHGEF39-205ENST00000490638 P0C879 139 aa11.05□□□□□ -0.64
ARHGEF39-205ENST00000490638 C6orf226Q5I0X4 101 aa11.05□□□□□ -0.64
ARHGEF39-205ENST00000490638 COL5A1-AS1Q5SY13 56 aa11.05□□□□□ -0.64
ARHGEF39-205ENST00000490638 SPRY2O43597 315 aa11.05□□□□□ -0.64
ARHGEF39-205ENST00000490638 NDUFAF3Q9BU61 184 aa11.05□□□□□ -0.64
ARHGEF39-205ENST00000490638 MRPS16Q9Y3D3 137 aaKnown RBP11.04□□□□□ -0.64
ARHGEF39-205ENST00000490638 RBAKDNA6NC62 111 aa11.04□□□□□ -0.64
ARHGEF39-205ENST00000490638 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
ARHGEF39-205ENST00000490638 LAMTOR2Q9Y2Q5 125 aa11.04□□□□□ -0.64
ARHGEF39-205ENST00000490638 SS18Q15532 418 aa11.04□□□□□ -0.64
ARHGEF39-205ENST00000490638 PRAC2D3DTV9 90 aa11.03□□□□□ -0.64
ARHGEF39-205ENST00000490638 RPL24P83731 157 aaKnown RBP11.03□□□□□ -0.64
ARHGEF39-205ENST00000490638 FAM167A-AS1Q96KT0 104 aa11.03□□□□□ -0.64
ARHGEF39-205ENST00000490638 ZNF48Q96MX3 618 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF39-205ENST00000490638 A8MWP6 167 aa11.03□□□□□ -0.64
ARHGEF39-205ENST00000490638 PET117Q6UWS5 81 aa11.03□□□□□ -0.64
ARHGEF39-205ENST00000490638 HIST3H2BBQ8N257 126 aa11.03□□□□□ -0.64
ARHGEF39-205ENST00000490638 DSCAML1Q8TD84 2053 aa11.02□□□□□ -0.64
ARHGEF39-205ENST00000490638 LINC00158P58513 81 aa11.02□□□□□ -0.64
ARHGEF39-205ENST00000490638 ATG2AQ2TAZ0 1938 aa11.02□□□□□ -0.65
ARHGEF39-205ENST00000490638 HIST2H2BDQ6DRA6 164 aa11.02□□□□□ -0.65
ARHGEF39-205ENST00000490638 TMEM243Q9BU79 118 aa11.02□□□□□ -0.65
ARHGEF39-205ENST00000490638 GAGE6Q13070 117 aa11.02□□□□□ -0.65
ARHGEF39-205ENST00000490638 DEFB125Q8N687 156 aa11.02□□□□□ -0.65
ARHGEF39-205ENST00000490638 HIST1H2BLQ99880 126 aa11.02□□□□□ -0.65
ARHGEF39-205ENST00000490638 V9GYV3 84 aa11.02□□□□□ -0.65
ARHGEF39-205ENST00000490638 APOMO95445 188 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 LTAP01374 205 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 RHOHQ15669 191 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 TRAV26-2A0A0B4J265 109 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 TRBV7-9A0A0J9YWB2 115 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 IGKCP01834 107 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 LINC01559Q495D7 138 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 DEFB4AO15263 64 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 DNAL4O96015 105 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 ATP5G1P05496 136 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 ESM1Q9NQ30 184 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 CRLF1O75462 422 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 KLF5Q13887 457 aaPredicted RBP11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 PSMG3-AS1Q96PY0 264 aa11.01□□□□□ -0.65
ARHGEF39-205ENST00000490638 CRYGBP07316 175 aa11□□□□□ -0.65
ARHGEF39-205ENST00000490638 I3L3M4 83 aa11□□□□□ -0.65
ARHGEF39-205ENST00000490638 RNF152Q8N8N0 203 aa11□□□□□ -0.65
ARHGEF39-205ENST00000490638 MRPL51Q4U2R6 128 aaKnown RBP11□□□□□ -0.65
ARHGEF39-205ENST00000490638 C2orf66Q6UXQ4 117 aa11□□□□□ -0.65
ARHGEF39-205ENST00000490638 ADAMTSL5Q6ZMM2 481 aa11□□□□□ -0.65
ARHGEF39-205ENST00000490638 Q6ZS46 218 aa11□□□□□ -0.65
ARHGEF39-205ENST00000490638 NEGR1Q7Z3B1 354 aa11□□□□□ -0.65
ARHGEF39-205ENST00000490638 SMIM13P0DJ93 91 aa10.99□□□□□ -0.65
ARHGEF39-205ENST00000490638 C10orf91Q5T1B1 145 aa10.99□□□□□ -0.65
ARHGEF39-205ENST00000490638 IGKV1D-37A0A075B6S9 117 aa10.99□□□□□ -0.65
ARHGEF39-205ENST00000490638 ZNF815PA8K554 130 aa10.99□□□□□ -0.65
ARHGEF39-205ENST00000490638 PLNP26678 52 aa10.99□□□□□ -0.65
ARHGEF39-205ENST00000490638 ZNF702PQ9H963 129 aa10.99□□□□□ -0.65
ARHGEF39-205ENST00000490638 TP53TG1Q9Y2A0 90 aa10.99□□□□□ -0.65
ARHGEF39-205ENST00000490638 TRAV9-2A0A087WT02 112 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms