RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 ZNF137PP52743 207 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 FOXA3P55318 350 aaPredicted RBP0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 LTC4SQ16873 150 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 OCIAD2Q56VL3 154 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 SPANXN1Q5VSR9 72 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 XAF1Q6GPH4 301 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 SCIMPQ6UWF3 145 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 C10orf99Q6UWK7 81 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 TMEM14EPQ6UXP3 125 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 TAC4Q86UU9 113 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 SNX29P2Q8IUI4 249 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 ARL17AQ8IVW1 177 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 C4orf33Q8N1A6 199 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 TEX29Q8N6K0 151 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 ATP6V0E2Q8NHE4 81 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 DIRC1Q969H9 104 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 TSC22D3Q99576 134 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 PRR15LQ9BU68 103 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 BPESC1Q9GZL8 116 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 CBLN4Q9NTU7 201 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 TMEM14BQ9NUH8 114 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 BET1LQ9NYM9 111 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 CCDC167Q9P0B6 97 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 COPZ2Q9P299 210 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 TRAPPC2LQ9UL33 140 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 NOP16Q9Y3C1 178 aaKnown RBP0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 COL12A1Q99715 3063 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 ANKRD30AQ9BXX3 1397 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 MED23Q9ULK4 1368 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 DISP2A7MBM2 1401 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 FGD6Q6ZV73 1430 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 ERCC6Q03468 1493 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 KDM5CP41229 1560 aa0.27□□□□□ -2.37
PRPF4B-207ENST00000490399 CELSR3Q9NYQ7 3312 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 STAB2Q8WWQ8 2551 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 A0A1B0GW64 132 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 C9JAW5 83 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 SNCGO76070 127 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 IGF2P01344 180 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 IGHV3-30P01768 117 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 CD3DP04234 171 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 SCTP09683 121 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 IGHV3-30-5P0DP03 117 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 INSL3P51460 131 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 CRYBA4P53673 196 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 RRAS2P62070 204 aaPredicted RBP0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 RPS28P62857 69 aaKnown RBP0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 BLCAPP62952 87 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 SARNPP82979 210 aaKnown RBP0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 HIST1H1AQ02539 215 aaPredicted RBP0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 SSBP1Q04837 148 aaKnown RBP0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 MIR22HGQ0VDD5 57 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 KLKP1Q107X0 134 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 OR8B8Q15620 311 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 RHOHQ15669 191 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 IQCJQ1A5X6 159 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 MORN2Q502X0 79 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 LINC01545Q5VT33 79 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 C12orf73Q69YU5 71 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 SLC48A1Q6P1K1 146 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 TSTD1Q8NFU3 115 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 OTOSQ8NHW6 89 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 DYNLRB2Q8TF09 96 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 NAT14Q8WUY8 206 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 TMEM141Q96I45 108 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 RERGLQ9H628 205 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 OTORQ9NRC9 128 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 RPRMQ9NS64 109 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 TMEM242Q9NWH2 141 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 SMPXQ9UHP9 88 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 ARHGEF10O15013 1369 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 RFX7Q2KHR2 1363 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 BLMP54132 1417 aaPredicted RBP0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 IGF2RP11717 2491 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 ZFYVE26Q68DK2 2539 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 ABCA12Q86UK0 2595 aa0.26□□□□□ -2.37
PRPF4B-207ENST00000490399 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 ANKRD11Q6UB99 2663 aaPredicted RBP0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 MYO18BQ8IUG5 2567 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 PBRM1Q86U86 1689 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 KDM6BO15054 1643 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 FRMPD1Q5SYB0 1578 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 LAMC3Q9Y6N6 1575 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 CDK13Q14004 1512 aaKnown RBP0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 PTPRGP23470 1445 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 FAM135BQ49AJ0 1406 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 MYOM3Q5VTT5 1437 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 A6NN06 94 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 FAM25AB3EWG3 89 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 FAM25CB3EWG5 89 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 FAM25GB3EWG6 89 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 APOC4-APOC2K7ER74 178 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 K7ERU9 68 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 M0QZK8 103 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 IGKCP01834 107 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 CD14P08571 375 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 IL7P13232 177 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 HLA-DRB4P13762 266 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 SPINK7P58062 85 aa0.25□□□□□ -2.37
PRPF4B-207ENST00000490399 SPCS2Q15005 226 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms