RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 SSTP61278 116 aa15.17■□□□□ 0.02
SND1-214ENST00000489417 C9orf85Q96MD7 179 aa15.17■□□□□ 0.02
SND1-214ENST00000489417 NTF3P20783 257 aa15.17■□□□□ 0.02
SND1-214ENST00000489417 PHLDA3Q9Y5J5 127 aa15.17■□□□□ 0.02
SND1-214ENST00000489417 TRAPPC1Q9Y5R8 145 aa15.17■□□□□ 0.02
SND1-214ENST00000489417 SPRY2O43597 315 aa15.16■□□□□ 0.02
SND1-214ENST00000489417 MT-ND6P03923 174 aa15.16■□□□□ 0.02
SND1-214ENST00000489417 TRGC2P03986 189 aa15.16■□□□□ 0.02
SND1-214ENST00000489417 PRM2P04554 102 aa15.16■□□□□ 0.02
SND1-214ENST00000489417 TWIST1Q15672 202 aa15.16■□□□□ 0.02
SND1-214ENST00000489417 SPANXN1Q5VSR9 72 aa15.16■□□□□ 0.02
SND1-214ENST00000489417 IGHV4-4A0A075B6R2 117 aa15.15■□□□□ 0.02
SND1-214ENST00000489417 HLA-DQA1P01909 254 aa15.15■□□□□ 0.02
SND1-214ENST00000489417 ZNF415Q09FC8 603 aa15.15■□□□□ 0.02
SND1-214ENST00000489417 GATD1Q8NB37 220 aa15.15■□□□□ 0.02
SND1-214ENST00000489417 A8MZ25 164 aa15.14■□□□□ 0.01
SND1-214ENST00000489417 ZNF705AQ6ZN79 300 aaPredicted RBP15.14■□□□□ 0.01
SND1-214ENST00000489417 FRZBQ92765 325 aa15.14■□□□□ 0.01
SND1-214ENST00000489417 MRPL18Q9H0U6 180 aaKnown RBP15.14■□□□□ 0.01
SND1-214ENST00000489417 MSRB1Q9NZV6 116 aa15.14■□□□□ 0.01
SND1-214ENST00000489417 PKD1L1Q8TDX9 2849 aa15.14■□□□□ 0.01
SND1-214ENST00000489417 C1orf196B1AJZ1 125 aa15.13■□□□□ 0.01
SND1-214ENST00000489417 M0R381 172 aa15.13■□□□□ 0.01
SND1-214ENST00000489417 NXPH4O95158 308 aa15.13■□□□□ 0.01
SND1-214ENST00000489417 FABP9Q0Z7S8 132 aa15.13■□□□□ 0.01
SND1-214ENST00000489417 ZFP82Q8N141 532 aa15.13■□□□□ 0.01
SND1-214ENST00000489417 UBE2CO00762 179 aa15.12■□□□□ 0.01
SND1-214ENST00000489417 AZU1P20160 251 aa15.12■□□□□ 0.01
SND1-214ENST00000489417 KPRPQ5T749 579 aaPredicted RBP15.12■□□□□ 0.01
SND1-214ENST00000489417 C11orf72Q8NBR9 251 aa15.12■□□□□ 0.01
SND1-214ENST00000489417 ZNF493Q6ZR52 646 aa15.11■□□□□ 0.01
SND1-214ENST00000489417 GSN-AS1Q9NRJ2 163 aa15.11■□□□□ 0.01
SND1-214ENST00000489417 TMA7Q9Y2S6 64 aaKnown RBP15.11■□□□□ 0.01
SND1-214ENST00000489417 PHOX2AO14813 284 aa15.1■□□□□ 0.01
SND1-214ENST00000489417 APCSP02743 223 aa15.1■□□□□ 0.01
SND1-214ENST00000489417 RRN3P1Q2M238 152 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 DMRTA1Q5VZB9 504 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 SYT8Q8NBV8 401 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 RNASE8Q8TDE3 154 aaKnown RBP15.09■□□□□ 0.01
SND1-214ENST00000489417 TMEM263Q8WUH6 116 aaKnown RBP15.09■□□□□ 0.01
SND1-214ENST00000489417 RCHY1Q96PM5 261 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 SPXQ9BT56 116 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 TMEM191AQ9H0A3 160 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 TRGC1P0CF51 173 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 SLAQ13239 276 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 DEFB135Q30KP9 77 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 SMIM15Q7Z3B0 74 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 C16orf74Q96GX8 76 aa15.09■□□□□ 0.01
SND1-214ENST00000489417 RAB5BP61020 215 aa15.08■□□□□ 0
SND1-214ENST00000489417 IL17DQ8TAD2 202 aa15.08■□□□□ 0
SND1-214ENST00000489417 M0R2P5 195 aa15.07■□□□□ 0
SND1-214ENST00000489417 FAM104BQ5XKR9 115 aa15.07■□□□□ 0
SND1-214ENST00000489417 AP1S3Q96PC3 154 aa15.07■□□□□ 0
SND1-214ENST00000489417 EVI2AP22794 236 aa15.06■□□□□ 0
SND1-214ENST00000489417 KIAA1644Q3SXP7 199 aa15.06■□□□□ 0
SND1-214ENST00000489417 ZNF876PQ49A33 203 aa15.06■□□□□ 0
SND1-214ENST00000489417 Q6ZWC4 215 aa15.06■□□□□ 0
SND1-214ENST00000489417 AMN1Q8IY45 258 aa15.06■□□□□ 0
SND1-214ENST00000489417 PTH2Q96A98 100 aa15.06■□□□□ 0
SND1-214ENST00000489417 X6R8D5 127 aa15.06■□□□□ 0
SND1-214ENST00000489417 SMIM9A6NGZ8 99 aa15.05■□□□□ -0
SND1-214ENST00000489417 PRB2P02812 416 aaPredicted RBP15.05■□□□□ -0
SND1-214ENST00000489417 DNAH3Q8TD57 4116 aa15.04■□□□□ -0
SND1-214ENST00000489417 RNF183Q96D59 192 aa15.04■□□□□ -0
SND1-214ENST00000489417 MUC4Q99102 2169 aa15.03■□□□□ -0
SND1-214ENST00000489417 PLAC8L1A1L4L8 177 aa15.03■□□□□ -0
SND1-214ENST00000489417 PIK3CD-AS1Q5SR53 167 aa15.03■□□□□ -0
SND1-214ENST00000489417 C14orf178Q8N769 122 aaPredicted RBP15.03■□□□□ -0
SND1-214ENST00000489417 DPH3P1Q9H4G8 78 aa15.03■□□□□ -0
SND1-214ENST00000489417 DNHD1Q96M86 4753 aa15.03■□□□□ -0
SND1-214ENST00000489417 K7EIL1 84 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST1H2BKO60814 126 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST1H2BJP06899 126 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST1H2BOP23527 126 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST1H2BBP33778 126 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST1H2BDP58876 126 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST1H2BCP62807 126 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST2H2BEQ16778 126 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.02■□□□□ -0
SND1-214ENST00000489417 OR11H2Q8NH07 326 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST1H2BHQ93079 126 aa15.02■□□□□ -0
SND1-214ENST00000489417 RNF185Q96GF1 192 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST1H2BNQ99877 126 aa15.02■□□□□ -0
SND1-214ENST00000489417 HIST1H2BMQ99879 126 aa15.02■□□□□ -0
SND1-214ENST00000489417 JPT2Q9H910 190 aa15.02■□□□□ -0
SND1-214ENST00000489417 MRPL16Q9NX20 251 aaKnown RBP15.02■□□□□ -0
SND1-214ENST00000489417 RAB4AP20338 218 aa15.01□□□□□ -0.01
SND1-214ENST00000489417 DAZ2Q13117 558 aaKnown RBP15.01□□□□□ -0.01
SND1-214ENST00000489417 MRPL51Q4U2R6 128 aaKnown RBP15.01□□□□□ -0.01
SND1-214ENST00000489417 SMIM17P0DL12 118 aa15□□□□□ -0.01
SND1-214ENST00000489417 KIF25-AS1Q9Y6Z4 181 aa15□□□□□ -0.01
SND1-214ENST00000489417 SRIP30626 198 aa15□□□□□ -0.01
SND1-214ENST00000489417 RASL10AQ92737 203 aa15□□□□□ -0.01
SND1-214ENST00000489417 OVOL2Q9BRP0 275 aa15□□□□□ -0.01
SND1-214ENST00000489417 ALKBH7Q9BT30 221 aaPredicted RBP15□□□□□ -0.01
SND1-214ENST00000489417 NDUFAF3Q9BU61 184 aa15□□□□□ -0.01
SND1-214ENST00000489417 NOP10Q9NPE3 64 aaKnown RBP15□□□□□ -0.01
SND1-214ENST00000489417 TRGV1A0A0A0MS02 117 aa14.99□□□□□ -0.01
SND1-214ENST00000489417 MGPP08493 103 aa14.99□□□□□ -0.01
SND1-214ENST00000489417 LGALS9BQ3B8N2 356 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms