RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 IGHV3-66A0A0C4DH42 116 aa13.9□□□□□ -0.18
COL16A1-215ENST00000488897 NMUP48645 174 aa13.9□□□□□ -0.18
COL16A1-215ENST00000488897 KRTAP24-1Q3LI83 254 aa13.9□□□□□ -0.18
COL16A1-215ENST00000488897 ADAMTSL5Q6ZMM2 481 aa13.9□□□□□ -0.18
COL16A1-215ENST00000488897 C9orf118A6NHY6 69 aa13.9□□□□□ -0.18
COL16A1-215ENST00000488897 GAS8-AS1O95177 125 aa13.9□□□□□ -0.18
COL16A1-215ENST00000488897 PPIFP30405 207 aaKnown RBP13.9□□□□□ -0.18
COL16A1-215ENST00000488897 SCGB2A2Q13296 93 aa13.9□□□□□ -0.18
COL16A1-215ENST00000488897 Q8N8P6 123 aa13.9□□□□□ -0.18
COL16A1-215ENST00000488897 ZMAT4Q9H898 229 aa13.9□□□□□ -0.18
COL16A1-215ENST00000488897 TRAV8-2A0A0B4J237 113 aa13.89□□□□□ -0.19
COL16A1-215ENST00000488897 GAGE10A6NGK3 116 aa13.89□□□□□ -0.19
COL16A1-215ENST00000488897 EVI2AP22794 236 aa13.89□□□□□ -0.19
COL16A1-215ENST00000488897 ODF1Q14990 250 aa13.89□□□□□ -0.19
COL16A1-215ENST00000488897 PCP2Q8IVA1 136 aa13.89□□□□□ -0.19
COL16A1-215ENST00000488897 GAGE12BA1L429 117 aa13.88□□□□□ -0.19
COL16A1-215ENST00000488897 PRSS1P07477 247 aa13.88□□□□□ -0.19
COL16A1-215ENST00000488897 TCTAP57738 103 aa13.88□□□□□ -0.19
COL16A1-215ENST00000488897 C9orf47Q6ZRZ4 202 aa13.88□□□□□ -0.19
COL16A1-215ENST00000488897 GTF2H5Q6ZYL4 71 aa13.88□□□□□ -0.19
COL16A1-215ENST00000488897 SMPXQ9UHP9 88 aa13.88□□□□□ -0.19
COL16A1-215ENST00000488897 OCIAD2Q56VL3 154 aa13.88□□□□□ -0.19
COL16A1-215ENST00000488897 C8orf86Q6ZUL3 223 aa13.88□□□□□ -0.19
COL16A1-215ENST00000488897 C11orf21Q9P2W6 132 aa13.88□□□□□ -0.19
COL16A1-215ENST00000488897 U3KQE9 123 aa13.88□□□□□ -0.19
COL16A1-215ENST00000488897 IGHV3OR16-13A0A075B7E8 117 aa13.87□□□□□ -0.19
COL16A1-215ENST00000488897 IGHV3-74A0A0B4J1X5 117 aa13.87□□□□□ -0.19
COL16A1-215ENST00000488897 ATP5LO75964 103 aa13.87□□□□□ -0.19
COL16A1-215ENST00000488897 ATP5G2Q06055 141 aa13.87□□□□□ -0.19
COL16A1-215ENST00000488897 OR2K2Q8NGT1 345 aa13.87□□□□□ -0.19
COL16A1-215ENST00000488897 LINC01006Q8NI28 216 aa13.87□□□□□ -0.19
COL16A1-215ENST00000488897 TMEM158Q8WZ71 300 aa13.87□□□□□ -0.19
COL16A1-215ENST00000488897 ATP6V0BQ99437 205 aa13.87□□□□□ -0.19
COL16A1-215ENST00000488897 PRSS47A8MTI9 375 aa13.86□□□□□ -0.19
COL16A1-215ENST00000488897 GATA1P15976 413 aaPredicted RBP13.86□□□□□ -0.19
COL16A1-215ENST00000488897 KIR3DS1Q14943 382 aa13.86□□□□□ -0.19
COL16A1-215ENST00000488897 IGLV2-18A0A075B6J9 118 aa13.86□□□□□ -0.19
COL16A1-215ENST00000488897 RNF151Q2KHN1 245 aa13.86□□□□□ -0.19
COL16A1-215ENST00000488897 IGHV7-4-1A0A0J9YVY3 117 aa13.85□□□□□ -0.19
COL16A1-215ENST00000488897 IGKCP01834 107 aa13.85□□□□□ -0.19
COL16A1-215ENST00000488897 TMEM86BQ8N661 226 aa13.85□□□□□ -0.19
COL16A1-215ENST00000488897 HHLA3Q9XRX5 114 aa13.85□□□□□ -0.19
COL16A1-215ENST00000488897 IGHV4-4A0A075B6R2 117 aa13.85□□□□□ -0.19
COL16A1-215ENST00000488897 HIGD1BQ9P298 99 aa13.85□□□□□ -0.19
COL16A1-215ENST00000488897 IGHV3-49A0A0A0MS15 119 aa13.84□□□□□ -0.19
COL16A1-215ENST00000488897 ZNF207O43670 478 aaKnown RBP13.84□□□□□ -0.19
COL16A1-215ENST00000488897 TRGV3P03979 118 aa13.84□□□□□ -0.19
COL16A1-215ENST00000488897 KLK15Q9H2R5 256 aa13.84□□□□□ -0.19
COL16A1-215ENST00000488897 IGHG2P01859 326 aa13.84□□□□□ -0.19
COL16A1-215ENST00000488897 KRTAP10-3P60369 221 aa13.84□□□□□ -0.19
COL16A1-215ENST00000488897 UFSP1Q6NVU6 142 aa13.84□□□□□ -0.19
COL16A1-215ENST00000488897 JMJD8Q96S16 334 aa13.84□□□□□ -0.19
COL16A1-215ENST00000488897 WNK1Q9H4A3 2382 aa13.83□□□□□ -0.19
COL16A1-215ENST00000488897 A0A0G2JLM5 398 aa13.83□□□□□ -0.19
COL16A1-215ENST00000488897 H3BUT2 72 aa13.83□□□□□ -0.19
COL16A1-215ENST00000488897 DPM2O94777 84 aa13.83□□□□□ -0.19
COL16A1-215ENST00000488897 SMIM17P0DL12 118 aa13.83□□□□□ -0.19
COL16A1-215ENST00000488897 LAGE3Q14657 143 aa13.83□□□□□ -0.19
COL16A1-215ENST00000488897 C16orf92Q96LL3 132 aa13.83□□□□□ -0.19
COL16A1-215ENST00000488897 LENEPQ9Y5L5 61 aa13.83□□□□□ -0.19
COL16A1-215ENST00000488897 SPANXN1Q5VSR9 72 aa13.83□□□□□ -0.2
COL16A1-215ENST00000488897 NRACQ8N912 160 aa13.83□□□□□ -0.2
COL16A1-215ENST00000488897 MYOZ3Q8TDC0 251 aa13.83□□□□□ -0.2
COL16A1-215ENST00000488897 FAM223BA6NKX1 122 aa13.82□□□□□ -0.2
COL16A1-215ENST00000488897 FAM223AQ8IWN6 122 aa13.82□□□□□ -0.2
COL16A1-215ENST00000488897 MDFIQ99750 246 aa13.82□□□□□ -0.2
COL16A1-215ENST00000488897 UFC1Q9Y3C8 167 aa13.82□□□□□ -0.2
COL16A1-215ENST00000488897 K7ERU9 68 aa13.82□□□□□ -0.2
COL16A1-215ENST00000488897 C18orf65Q6ZTR6 163 aa13.82□□□□□ -0.2
COL16A1-215ENST00000488897 TRAV41A0A0B4J266 112 aa13.81□□□□□ -0.2
COL16A1-215ENST00000488897 K7EP34 96 aa13.81□□□□□ -0.2
COL16A1-215ENST00000488897 IGKV2D-26A0A0A0MRZ7 120 aa13.81□□□□□ -0.2
COL16A1-215ENST00000488897 HLA-DRB4P13762 266 aa13.8□□□□□ -0.2
COL16A1-215ENST00000488897 GLMPQ8WWB7 406 aa13.8□□□□□ -0.2
COL16A1-215ENST00000488897 VPS25Q9BRG1 176 aa13.8□□□□□ -0.2
COL16A1-215ENST00000488897 HLA-DRB4X5D2U9 266 aa13.8□□□□□ -0.2
COL16A1-215ENST00000488897 PKD1L1Q8TDX9 2849 aa13.8□□□□□ -0.2
COL16A1-215ENST00000488897 SMIM13P0DJ93 91 aa13.8□□□□□ -0.2
COL16A1-215ENST00000488897 TCTEX1D4Q5JR98 221 aa13.8□□□□□ -0.2
COL16A1-215ENST00000488897 MRAP2Q96G30 205 aa13.8□□□□□ -0.2
COL16A1-215ENST00000488897 A0A1W2PRX2 142 aa13.79□□□□□ -0.2
COL16A1-215ENST00000488897 CRIP2P52943 208 aaPredicted RBP13.79□□□□□ -0.2
COL16A1-215ENST00000488897 ZC2HC1BQ5TFG8 222 aa13.79□□□□□ -0.2
COL16A1-215ENST00000488897 RAB37Q96AX2 223 aa13.79□□□□□ -0.2
COL16A1-215ENST00000488897 LINC00477Q96M19 166 aa13.79□□□□□ -0.2
COL16A1-215ENST00000488897 C19orf54Q5BKX5 351 aa13.79□□□□□ -0.2
COL16A1-215ENST00000488897 TRAV26-2A0A0B4J265 109 aa13.78□□□□□ -0.2
COL16A1-215ENST00000488897 GTSCR1Q86UQ5 136 aa13.78□□□□□ -0.2
COL16A1-215ENST00000488897 A0A1W2PPM0 123 aa13.78□□□□□ -0.2
COL16A1-215ENST00000488897 H3BVH4 76 aa13.78□□□□□ -0.2
COL16A1-215ENST00000488897 IGHV3-11P01762 117 aa13.78□□□□□ -0.2
COL16A1-215ENST00000488897 CD28P10747 220 aa13.78□□□□□ -0.2
COL16A1-215ENST00000488897 ARL3P36405 182 aa13.78□□□□□ -0.2
COL16A1-215ENST00000488897 CHAC1Q9BUX1 264 aa13.78□□□□□ -0.2
COL16A1-215ENST00000488897 PF4V1P10720 104 aa13.77□□□□□ -0.21
COL16A1-215ENST00000488897 GCSHP23434 173 aa13.77□□□□□ -0.21
COL16A1-215ENST00000488897 KHDC1LQ5JSQ8 128 aa13.77□□□□□ -0.21
COL16A1-215ENST00000488897 OR5A1Q8NGJ0 315 aa13.77□□□□□ -0.21
COL16A1-215ENST00000488897 DUX3Q96PT4 197 aa13.77□□□□□ -0.21
COL16A1-215ENST00000488897 A0A087WX48 190 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 409.3 ms