RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 GOLT1AQ6ZVE7 132 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 NIT1Q86X76 327 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 Q8N3U1 123 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 OR5C1Q8NGR4 320 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 ZC2HC1AQ96GY0 325 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 WDR61Q9GZS3 305 aaKnown RBP4.23□□□□□ -1.73
PTCH1-211ENST00000488809 C11orf1Q9H5F2 150 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 OTORQ9NRC9 128 aa4.23□□□□□ -1.73
PTCH1-211ENST00000488809 PGPEP1LA6NFU8 196 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 CCDC160A6NGH7 325 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 RHODO00212 210 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 LINC00694P0DN24 101 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 S100A4P26447 101 aaKnown RBP4.22□□□□□ -1.73
PTCH1-211ENST00000488809 RAB32Q13637 225 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 LGALSLQ3ZCW2 172 aaPredicted RBP4.22□□□□□ -1.73
PTCH1-211ENST00000488809 DMRTA1Q5VZB9 504 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 DGAT2L7PQ6IED9 249 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 ATRAIDQ6UW56 229 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 DPPA3Q6W0C5 159 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 PQLC2Q6ZP29 291 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 DAZAP1Q96EP5 407 aaKnown RBP4.22□□□□□ -1.73
PTCH1-211ENST00000488809 C9orf85Q96MD7 179 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 PARLQ9H300 379 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 OR5AC2Q9NZP5 309 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 MBD2Q9UBB5 411 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 TNXBP22105 4242 aa4.22□□□□□ -1.73
PTCH1-211ENST00000488809 GCGP01275 180 aa4.21□□□□□ -1.74
PTCH1-211ENST00000488809 MT1HL1P0DM35 61 aa4.21□□□□□ -1.74
PTCH1-211ENST00000488809 BTCP35070 178 aa4.21□□□□□ -1.74
PTCH1-211ENST00000488809 HNRNPA3P51991 378 aaKnown RBP4.21□□□□□ -1.74
PTCH1-211ENST00000488809 PKIAP61925 76 aa4.21□□□□□ -1.74
PTCH1-211ENST00000488809 RPL19P84098 196 aaKnown RBP4.21□□□□□ -1.74
PTCH1-211ENST00000488809 NHLH2Q02577 135 aa4.21□□□□□ -1.74
PTCH1-211ENST00000488809 SMUG1Q53HV7 270 aa4.21□□□□□ -1.74
PTCH1-211ENST00000488809 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.21□□□□□ -1.74
PTCH1-211ENST00000488809 OR2T35Q8NGX2 323 aa4.21□□□□□ -1.74
PTCH1-211ENST00000488809 OR2G3Q8NGZ4 309 aa4.21□□□□□ -1.74
PTCH1-211ENST00000488809 TRAV6A0A075B6T7 132 aa4.2□□□□□ -1.74
PTCH1-211ENST00000488809 A0A1W2PPV4 95 aa4.2□□□□□ -1.74
PTCH1-211ENST00000488809 TMEM262E9PQX1 116 aa4.2□□□□□ -1.74
PTCH1-211ENST00000488809 HLA-DQA1P01909 254 aa4.2□□□□□ -1.74
PTCH1-211ENST00000488809 RPL36AP83881 106 aaKnown RBP4.2□□□□□ -1.74
PTCH1-211ENST00000488809 C9orf163Q8N9P6 203 aa4.2□□□□□ -1.74
PTCH1-211ENST00000488809 SCGB1C1Q8TD33 95 aa4.2□□□□□ -1.74
PTCH1-211ENST00000488809 RPL36ALQ969Q0 106 aaKnown RBP4.2□□□□□ -1.74
PTCH1-211ENST00000488809 LINC00479Q96M42 142 aa4.2□□□□□ -1.74
PTCH1-211ENST00000488809 TRBV10-1A0A0K0K1A3 114 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 USP17L23D6RBM5 183 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 LYRM1O43325 122 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 TCRBP04435 133 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 RNASE3P12724 160 aaKnown RBP4.19□□□□□ -1.74
PTCH1-211ENST00000488809 IL7P13232 177 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 ASIPP42127 132 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 GNG5P63218 68 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 IL15RAQ13261 267 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 MIAQ16674 131 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 SAPCD1Q5SSQ6 148 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 C5orf17Q8NAS9 161 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 OR10G7Q8NGN6 311 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 TVP23CQ96ET8 276 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 RNF185Q96GF1 192 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 SEC22CQ9BRL7 303 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 SAMD10Q9BYL1 202 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 NUDT15Q9NV35 164 aa4.19□□□□□ -1.74
PTCH1-211ENST00000488809 TRBV7-3A0A075B6L6 115 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.18□□□□□ -1.74
PTCH1-211ENST00000488809 ANGP03950 147 aaKnown RBP4.18□□□□□ -1.74
PTCH1-211ENST00000488809 TCRAP04437 139 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 PET100P0DJ07 73 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 ZNF80P51504 273 aaPredicted RBP4.18□□□□□ -1.74
PTCH1-211ENST00000488809 CYCSP99999 105 aaKnown RBP4.18□□□□□ -1.74
PTCH1-211ENST00000488809 FLI1Q01543 452 aaPredicted RBP4.18□□□□□ -1.74
PTCH1-211ENST00000488809 FAM74A4Q5TZK3 123 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 C14orf178Q8N769 122 aaPredicted RBP4.18□□□□□ -1.74
PTCH1-211ENST00000488809 C15orf54Q8N8G6 183 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 TMEM75Q8N9X5 138 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 CLRN3Q8NCR9 226 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 OR11H4Q8NGC9 324 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 C7orf33Q8WU49 177 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 DPH3Q96FX2 82 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 DNAJC30Q96LL9 226 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 SGK494Q96LW2 274 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 IL36BQ9NZH7 164 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 C11orf21Q9P2W6 132 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 PSG8Q9UQ74 426 aa4.18□□□□□ -1.74
PTCH1-211ENST00000488809 FABP5P3A8MUU1 101 aa4.17□□□□□ -1.74
PTCH1-211ENST00000488809 PRSS1P07477 247 aa4.17□□□□□ -1.74
PTCH1-211ENST00000488809 H2AFB2P0C5Z0 115 aa4.17□□□□□ -1.74
PTCH1-211ENST00000488809 LRRC37A5PQ49AS3 106 aa4.17□□□□□ -1.74
PTCH1-211ENST00000488809 TMEM97Q5BJF2 176 aa4.17□□□□□ -1.74
PTCH1-211ENST00000488809 UFSP1Q6NVU6 142 aa4.17□□□□□ -1.74
PTCH1-211ENST00000488809 ENHOQ6UWT2 76 aa4.17□□□□□ -1.74
PTCH1-211ENST00000488809 PRNTQ86SH4 94 aa4.17□□□□□ -1.74
PTCH1-211ENST00000488809 RBM38Q9H0Z9 239 aaKnown RBP4.17□□□□□ -1.74
PTCH1-211ENST00000488809 AP5S1Q9NUS5 200 aa4.17□□□□□ -1.74
PTCH1-211ENST00000488809 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.17□□□□□ -1.74
PTCH1-211ENST00000488809 IGHV3-64A0A075B6Q5 118 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 TRBV6-8A0A0A6YYG3 113 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 FAM240BA0A1B0GVZ2 78 aa4.16□□□□□ -1.74
PTCH1-211ENST00000488809 B4DEV8 164 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms