RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-208	ENST00000488536	ADAMTSL5	Q6ZMM2	481 aa		10.46	□□□□□ -0.73
UBA7-208	ENST00000488536	C9orf85	Q96MD7	179 aa		10.46	□□□□□ -0.73
UBA7-208	ENST00000488536	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.46	□□□□□ -0.73
UBA7-208	ENST00000488536	HLA-DRB4	X5D2U9	266 aa		10.46	□□□□□ -0.73
UBA7-208	ENST00000488536	ABCA12	Q86UK0	2595 aa		10.46	□□□□□ -0.74
UBA7-208	ENST00000488536	KIR3DS1	Q14943	382 aa		10.45	□□□□□ -0.74
UBA7-208	ENST00000488536	KHDC1L	Q5JSQ8	128 aa		10.45	□□□□□ -0.74
UBA7-208	ENST00000488536	AMTN	Q6UX39	209 aa		10.45	□□□□□ -0.74
UBA7-208	ENST00000488536	LINC00173	Q6ZV60	143 aa		10.45	□□□□□ -0.74
UBA7-208	ENST00000488536	LINC00467	Q9BRT7	94 aa		10.45	□□□□□ -0.74
UBA7-208	ENST00000488536	APC	P25054	2843 aa		10.45	□□□□□ -0.74
UBA7-208	ENST00000488536	CENPE	Q02224	2701 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	TRAV12-3	A0A0B4J271	114 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	GNRH2	O43555	120 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	CD7	P09564	240 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	IGLL1	P15814	213 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	HNRNPA3	P51991	378 aa	Known RBP	10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	HILS1	P60008	231 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	DEFB1	P60022	68 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	DEFB114	Q30KQ6	69 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536		Q6ZQT7	251 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	DLX4	Q92988	240 aa	Predicted RBP	10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	PTH2	Q96A98	100 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	SMIM2	Q9BVW6	85 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	CELSR2	Q9HCU4	2923 aa		10.44	□□□□□ -0.74
UBA7-208	ENST00000488536	CRYBG3	Q68DQ2	2970 aa		10.43	□□□□□ -0.74
UBA7-208	ENST00000488536	IGHV3-16	A0A0C4DH30	117 aa		10.43	□□□□□ -0.74
UBA7-208	ENST00000488536	SUMO2	P61956	95 aa	Known RBP	10.43	□□□□□ -0.74
UBA7-208	ENST00000488536		Q6ZN92	141 aa		10.43	□□□□□ -0.74
UBA7-208	ENST00000488536	ESM1	Q9NQ30	184 aa		10.43	□□□□□ -0.74
UBA7-208	ENST00000488536	GOLT1B	Q9Y3E0	138 aa		10.43	□□□□□ -0.74
UBA7-208	ENST00000488536	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.43	□□□□□ -0.74
UBA7-208	ENST00000488536		H3BMM0	161 aa		10.42	□□□□□ -0.74
UBA7-208	ENST00000488536	TCAP	O15273	167 aa		10.42	□□□□□ -0.74
UBA7-208	ENST00000488536	DEFB136	Q30KP8	78 aa		10.42	□□□□□ -0.74
UBA7-208	ENST00000488536	TMEM61	Q8N0U2	210 aa		10.42	□□□□□ -0.74
UBA7-208	ENST00000488536	ATOH7	Q8N100	152 aa		10.42	□□□□□ -0.74
UBA7-208	ENST00000488536	SNHG12	Q9BXW3	62 aa		10.42	□□□□□ -0.74
UBA7-208	ENST00000488536	KIF25-AS1	Q9Y6Z4	181 aa		10.42	□□□□□ -0.74
UBA7-208	ENST00000488536	CCL24	O00175	119 aa		10.41	□□□□□ -0.74
UBA7-208	ENST00000488536	DEFB131A	P59861	70 aa		10.41	□□□□□ -0.74
UBA7-208	ENST00000488536	HIST2H2BC	Q6DN03	193 aa		10.41	□□□□□ -0.74
UBA7-208	ENST00000488536	SLC25A34	Q6PIV7	304 aa		10.41	□□□□□ -0.74
UBA7-208	ENST00000488536	C18orf65	Q6ZTR6	163 aa		10.41	□□□□□ -0.74
UBA7-208	ENST00000488536	C14orf178	Q8N769	122 aa	Predicted RBP	10.41	□□□□□ -0.74
UBA7-208	ENST00000488536	TRBV6-5	A0A0K0K1A5	114 aa		10.4	□□□□□ -0.74
UBA7-208	ENST00000488536	SPINK13	Q1W4C9	94 aa		10.4	□□□□□ -0.74
UBA7-208	ENST00000488536	LINC01006	Q8NI28	216 aa		10.4	□□□□□ -0.74
UBA7-208	ENST00000488536	TMEM158	Q8WZ71	300 aa		10.4	□□□□□ -0.74
UBA7-208	ENST00000488536	RASL10A	Q92737	203 aa		10.4	□□□□□ -0.74
UBA7-208	ENST00000488536	RAX2	Q96IS3	184 aa		10.4	□□□□□ -0.74
UBA7-208	ENST00000488536	EDA2R	Q9HAV5	297 aa		10.4	□□□□□ -0.74
UBA7-208	ENST00000488536	MGP	P08493	103 aa		10.39	□□□□□ -0.75
UBA7-208	ENST00000488536	GATA1	P15976	413 aa	Predicted RBP	10.39	□□□□□ -0.75
UBA7-208	ENST00000488536	LINC00315	P59091	139 aa		10.39	□□□□□ -0.75
UBA7-208	ENST00000488536	FAM110A	Q9BQ89	295 aa		10.39	□□□□□ -0.75
UBA7-208	ENST00000488536	MAP6D1	Q9H9H5	199 aa		10.39	□□□□□ -0.75
UBA7-208	ENST00000488536	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.39	□□□□□ -0.75
UBA7-208	ENST00000488536	CHD6	Q8TD26	2715 aa		10.39	□□□□□ -0.75
UBA7-208	ENST00000488536	ITPR3	Q14573	2671 aa		10.39	□□□□□ -0.75
UBA7-208	ENST00000488536	GAS8-AS1	O95177	125 aa		10.38	□□□□□ -0.75
UBA7-208	ENST00000488536	COL5A1-AS1	Q5SY13	56 aa		10.38	□□□□□ -0.75
UBA7-208	ENST00000488536		Q8N1Y9	231 aa		10.38	□□□□□ -0.75
UBA7-208	ENST00000488536	ZMAT4	Q9H898	229 aa		10.38	□□□□□ -0.75
UBA7-208	ENST00000488536	DOPEY2	Q9Y3R5	2298 aa		10.38	□□□□□ -0.75
UBA7-208	ENST00000488536	TRAV12-1	A0A0B4J245	112 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	TRAV26-2	A0A0B4J265	109 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536		H7C1H1	209 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	VCY	O14598	125 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	EREG	O14944	169 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	DLEU1	O43261	78 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	NUDT3	O95989	172 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	COX8A	P10176	69 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	CD28	P10747	220 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	CD300E	Q496F6	205 aa	Predicted RBP	10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	TOMM6	Q96B49	74 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	SPX	Q9BT56	116 aa		10.37	□□□□□ -0.75
UBA7-208	ENST00000488536	TRAV12-2	A0A075B6T6	113 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	hDV102S1	A0JD36	115 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	CBY3	A6NI87	242 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536		H0Y8G0	127 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	INS	P01308	110 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	IGKV3-20	P01619	116 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	PRSS1	P07477	247 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	NUTF2	P61970	127 aa	Known RBP	10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	ZNF415	Q09FC8	603 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	MAJIN	Q3KP22	176 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	SELENOK	Q9Y6D0	94 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	TEX15	Q9BXT5	2789 aa		10.36	□□□□□ -0.75
UBA7-208	ENST00000488536	MAP1A	P78559	2803 aa	Predicted RBP	10.35	□□□□□ -0.75
UBA7-208	ENST00000488536	TENM4	Q6N022	2769 aa		10.35	□□□□□ -0.75
UBA7-208	ENST00000488536	KNCN	A6PVL3	124 aa		10.35	□□□□□ -0.75
UBA7-208	ENST00000488536	SIVA1	O15304	175 aa		10.35	□□□□□ -0.75
UBA7-208	ENST00000488536	DPM2	O94777	84 aa		10.35	□□□□□ -0.75
UBA7-208	ENST00000488536	PLN	P26678	52 aa		10.35	□□□□□ -0.75
UBA7-208	ENST00000488536	ODF1	Q14990	250 aa		10.35	□□□□□ -0.75
UBA7-208	ENST00000488536	TRPT1	Q86TN4	253 aa	Known RBP	10.35	□□□□□ -0.75
UBA7-208	ENST00000488536	KIR2DL4	Q99706	377 aa		10.35	□□□□□ -0.75
UBA7-208	ENST00000488536	CITED2	Q99967	270 aa	Predicted RBP	10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms