RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 BLMP54132 1417 aaPredicted RBP0.09□□□□□ -2.4
LTN1-206ENST00000486427 LRP1Q07954 4544 aaKnown RBP0.09□□□□□ -2.4
LTN1-206ENST00000486427 MYH13Q9UKX3 1938 aa0.09□□□□□ -2.4
LTN1-206ENST00000486427 CDK5RAP2Q96SN8 1893 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 TNS1Q9HBL0 1735 aaKnown RBP0.08□□□□□ -2.4
LTN1-206ENST00000486427 SYNJ1O43426 1573 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 JMJD1CQ15652 2540 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 A0A096LNT2 108 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 OR2H2O95918 312 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 SCTP09683 121 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 HLA-DRB4P13762 266 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 AKR1D1P51857 326 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 PLGLB1Q02325 96 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 SPINK6Q6UWN8 80 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 TCTE3Q8IZS6 198 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 HLA-DRB4X5D2U9 266 aa0.08□□□□□ -2.4
LTN1-206ENST00000486427 SPAG17Q6Q759 2223 aa0.07□□□□□ -2.4
LTN1-206ENST00000486427 CLLU1Q5K131 121 aa0.07□□□□□ -2.4
LTN1-206ENST00000486427 SNX29P2Q8IUI4 249 aa0.07□□□□□ -2.4
LTN1-206ENST00000486427 TAS2R8Q9NYW2 309 aa0.07□□□□□ -2.4
LTN1-206ENST00000486427 CACNA1HO95180 2353 aa0.07□□□□□ -2.4
LTN1-206ENST00000486427 TPRP12270 2363 aaKnown RBP0.07□□□□□ -2.4
LTN1-206ENST00000486427 PTPRMP28827 1452 aa0.07□□□□□ -2.4
LTN1-206ENST00000486427 F5P12259 2224 aa0.07□□□□□ -2.4
LTN1-206ENST00000486427 PLXNA1Q9UIW2 1896 aa0.07□□□□□ -2.4
LTN1-206ENST00000486427 TTC28Q96AY4 2481 aa0.07□□□□□ -2.4
LTN1-206ENST00000486427 UNC13BO14795 1591 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 ZNF142P52746 1687 aaPredicted RBP0.06□□□□□ -2.4
LTN1-206ENST00000486427 SMIM24O75264 130 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 PYYP10082 97 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 SLC25A6P12236 298 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 ELOF1P60002 83 aaKnown RBP0.06□□□□□ -2.4
LTN1-206ENST00000486427 EMX2Q04743 252 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 CCDC153Q494R4 210 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 OR2T2Q6IF00 324 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 PPDPFLQ8WWR9 84 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 TMEM141Q96I45 108 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 LSM2Q9Y333 95 aaKnown RBP0.06□□□□□ -2.4
LTN1-206ENST00000486427 NOP16Q9Y3C1 178 aaKnown RBP0.06□□□□□ -2.4
LTN1-206ENST00000486427 MYH6P13533 1939 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 CCDC171Q6TFL3 1326 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 MUC22E2RYF6 1773 aaPredicted RBP0.06□□□□□ -2.4
LTN1-206ENST00000486427 IGF2RP11717 2491 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 ANKRD30AQ9BXX3 1397 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 ZFYVE26Q68DK2 2539 aa0.06□□□□□ -2.4
LTN1-206ENST00000486427 POLQO75417 2590 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 OTOGQ6ZRI0 2925 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 TEX49A0A1B0GTD5 131 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 RBP4P02753 201 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 VMO1Q7Z5L0 202 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 AKAP14Q86UN6 197 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 ATP6V0E2Q8NHE4 81 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 DYNLRB2Q8TF09 96 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 IFI27L1Q96BM0 104 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 DSCR8Q96T75 97 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 PROK2Q9HC23 129 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 ABCA12Q86UK0 2595 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 PHIPQ8WWQ0 1821 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 LAMC3Q9Y6N6 1575 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 AKAP11Q9UKA4 1901 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 FSIP2Q5CZC0 6907 aa0.05□□□□□ -2.4
LTN1-206ENST00000486427 UHRF1BP1LA0JNW5 1464 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 ERCC6Q03468 1493 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 ARFGEF1Q9Y6D6 1849 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 A0A087WTM6 91 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 BORCS7-ASMTA0A0B4J1R7 106 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 TRAV2A0A0B4J234 112 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 TCRBV3S1A0A5B6 114 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 J3QLW9 94 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 M0R129 80 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 APOC1P02654 83 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 DBIP07108 87 aaKnown RBP0.04□□□□□ -2.4
LTN1-206ENST00000486427 NPC2P61916 151 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 DR1Q01658 176 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 MORN2Q502X0 79 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 ATP11AUNQ6ZP68 121 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 COA4Q9NYJ1 87 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 BET1LQ9NYM9 111 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 ANK2Q01484 3957 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 UNC13AQ9UPW8 1703 aa0.04□□□□□ -2.4
LTN1-206ENST00000486427 HRNRQ86YZ3 2850 aaPredicted RBP0.04□□□□□ -2.4
LTN1-206ENST00000486427 PARP14Q460N5 1801 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 PTPRZ1P23471 2315 aaPredicted RBP0.03□□□□□ -2.4
LTN1-206ENST00000486427 CELSR2Q9HCU4 2923 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 TRAV12-2A0A075B6T6 113 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 FAM236AA0A1B0GUQ0 79 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 FAM236BA0A1B0GV22 79 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 ZNF670-ZNF695F2Z2N8 137 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 M0R2P5 195 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 ARPC5O15511 151 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 IGLC6P0CF74 106 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 SCGB1A1P11684 91 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 HIST1H1AQ02539 215 aaPredicted RBP0.03□□□□□ -2.4
LTN1-206ENST00000486427 CYP2G1PQ6ZSU1 146 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 PYDC1Q8WXC3 89 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 MAGOHBQ96A72 148 aaKnown RBP0.03□□□□□ -2.4
LTN1-206ENST00000486427 AIF1LQ9BQI0 150 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 VPS25Q9BRG1 176 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 SPANXA1Q9NS26 97 aa0.03□□□□□ -2.4
LTN1-206ENST00000486427 NRXN2Q9P2S2 1712 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms