RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 STPG4Q8N801 248 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 TMEM75Q8N9X5 138 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 OR51S1Q8NGJ8 323 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 C20orf85Q9H1P6 137 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 Q9UF83 564 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 SHPKQ9UHJ6 478 aa3.24□□□□□ -1.89
PTPN4-210ENST00000485247 TRBV19A0A075B6N1 114 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.23□□□□□ -1.89
PTPN4-210ENST00000485247 TMEM262E9PQX1 116 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 GOSR2O14653 212 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 AGPAT2O15120 278 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 MED6O75586 246 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 LINC00694P0DN24 101 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 HIST1H1EP10412 219 aaKnown RBP3.23□□□□□ -1.89
PTPN4-210ENST00000485247 ZNF138P52744 262 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 COX6A2Q02221 97 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 ZNF266Q14584 549 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 ZNF876PQ49A33 203 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 C10orf113Q5VZT2 155 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 FAAP20Q6NZ36 180 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 Q75L30 129 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 C15orf54Q8N8G6 183 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 OR2T35Q8NGX2 323 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 CIB3Q96Q77 187 aaPredicted RBP3.23□□□□□ -1.89
PTPN4-210ENST00000485247 SOSTQ9BQB4 213 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 SAMD10Q9BYL1 202 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 PRELID1Q9Y255 219 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 KCNIP3Q9Y2W7 256 aa3.23□□□□□ -1.89
PTPN4-210ENST00000485247 STRAPQ9Y3F4 350 aaKnown RBP3.23□□□□□ -1.89
PTPN4-210ENST00000485247 SYNGR2O43760 224 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 CIDEAO60543 219 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 RAB3DO95716 219 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 ANGP03950 147 aaKnown RBP3.22□□□□□ -1.89
PTPN4-210ENST00000485247 TCRBP04435 133 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 TYMSP04818 313 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 SMIM18P0DKX4 95 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 TGFBR1P36897 503 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 Q6AWC8 147 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 LINC00479Q96M42 142 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 CHCHD7Q9BUK0 85 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 VCXQ9H320 206 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 SLC39A9Q9NUM3 307 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 GPR132Q9UNW8 380 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 TIMM9Q9Y5J7 89 aa3.22□□□□□ -1.89
PTPN4-210ENST00000485247 K7EPK0 472 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 IFNA7P01567 189 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 TBPP20226 339 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 CAV2P51636 162 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 FGF8P55075 233 aaPredicted RBP3.21□□□□□ -1.9
PTPN4-210ENST00000485247 MIAQ16674 131 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 MPV17L2Q567V2 206 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 KRTAP26-1Q6PEX3 210 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 CLPSL2Q6UWE3 100 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 IZUMO2Q6UXV1 221 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 CROCCP3Q8IVE0 287 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 C14orf178Q8N769 122 aaPredicted RBP3.21□□□□□ -1.9
PTPN4-210ENST00000485247 ATP5SQ99766 215 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 NPVFQ9HCQ7 196 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 CCDC59Q9P031 241 aaKnown RBP3.21□□□□□ -1.9
PTPN4-210ENST00000485247 COMMD3Q9UBI1 195 aa3.21□□□□□ -1.9
PTPN4-210ENST00000485247 TRBV7-9A0A0J9YWB2 115 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 CTDSPLO15194 276 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 NDUFS6O75380 124 aaKnown RBP3.2□□□□□ -1.9
PTPN4-210ENST00000485247 PYYP10082 97 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 VPREB1P12018 145 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 AQP4P55087 323 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 TAS2R19P59542 299 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 SNRPEP62304 92 aaKnown RBP3.2□□□□□ -1.9
PTPN4-210ENST00000485247 ZNF506Q5JVG8 444 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 TMEM229BQ8NBD8 167 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 INO80EQ8NBZ0 244 aaPredicted RBP3.2□□□□□ -1.9
PTPN4-210ENST00000485247 GPN1Q9HCN4 374 aaPredicted RBP3.2□□□□□ -1.9
PTPN4-210ENST00000485247 PSENENQ9NZ42 101 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 MTFP1Q9UDX5 166 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 BLOC1S6Q9UL45 172 aa3.2□□□□□ -1.9
PTPN4-210ENST00000485247 IGLV10-54A0A075B6I4 117 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 DISC1C4P0D8 188 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 HPGDSO60760 199 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 TSPAN13O95857 204 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 APOA1P02647 267 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 METTL15P1P0C7V9 234 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 CFC1BP0CG36 223 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 CFC1P0CG37 223 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 ANXA3P12429 323 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 SRPXP78539 464 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 GAGE2BQ13066 116 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 PDE6HQ13956 83 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 GAGE2EQ4V326 116 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 MIC13Q5XKP0 118 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 GAGE2AQ6NT46 116 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 Q6ZRG5 221 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 OR2G3Q8NGZ4 309 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 ASB13Q8WXK3 278 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 MGST2Q99735 147 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 PARLQ9H300 379 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 GAGE2DQ9UEU5 116 aa3.19□□□□□ -1.9
PTPN4-210ENST00000485247 A0A096LNI7 61 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 TRAV21A0A0B4J279 112 aa3.18□□□□□ -1.9
PTPN4-210ENST00000485247 FAM25AB3EWG3 89 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms