RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 TMEM35BQ8NCS4 154 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 TMEM14BQ9NUH8 114 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 COMMD3Q9UBI1 195 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 METTL1Q9UBP6 276 aaKnown RBP0.09□□□□□ -2.4
SCAF11-207ENST00000484275 ABCA1O95477 2261 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 CCDC171Q6TFL3 1326 aa0.09□□□□□ -2.4
SCAF11-207ENST00000484275 SPEF2Q9C093 1822 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 CPDO75976 1380 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 UBR5O95071 2799 aaPredicted RBP0.08□□□□□ -2.4
SCAF11-207ENST00000484275 LRP1Q07954 4544 aaKnown RBP0.08□□□□□ -2.4
SCAF11-207ENST00000484275 MED13LQ71F56 2210 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 A0A096LNT2 108 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 TRAV2A0A0B4J234 112 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 DPM2O94777 84 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 IGKCP01834 107 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 APOC1P02654 83 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 SLC25A5P05141 298 aaKnown RBP0.08□□□□□ -2.4
SCAF11-207ENST00000484275 HSD17B12Q53GQ0 312 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 PPP1R1CQ8WVI7 109 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 PPDPFLQ8WWR9 84 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 MAGOHBQ96A72 148 aaKnown RBP0.08□□□□□ -2.4
SCAF11-207ENST00000484275 DSCR8Q96T75 97 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 SELENOSQ9BQE4 189 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 VPS25Q9BRG1 176 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 SLC35B3Q9H1N7 401 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 TAS2R8Q9NYW2 309 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 HSPB11Q9Y547 144 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 ZNF292O60281 2723 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 MUC22E2RYF6 1773 aaPredicted RBP0.08□□□□□ -2.4
SCAF11-207ENST00000484275 CELSR1Q9NYQ6 3014 aa0.08□□□□□ -2.4
SCAF11-207ENST00000484275 CDK13Q14004 1512 aaKnown RBP0.08□□□□□ -2.4
SCAF11-207ENST00000484275 NWD2Q9ULI1 1742 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 FLNCQ14315 2725 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 TRAV12-2A0A075B6T6 113 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 TRAV36DV7A0A075B6V5 113 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 A0A1B0GX51 115 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 OR2H2O95918 312 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 CD3DP04234 171 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 TCRAP04437 139 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 CCKP06307 115 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 MPC1LP0DKB6 136 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 AKR1D1P51857 326 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 RPS28P62857 69 aaKnown RBP0.07□□□□□ -2.4
SCAF11-207ENST00000484275 PROK2Q9HC23 129 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 SPANXA1Q9NS26 97 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 SPANXCQ9NY87 97 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 GINS2Q9Y248 185 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 NDUFAF1Q9Y375 327 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 F5P12259 2224 aa0.07□□□□□ -2.4
SCAF11-207ENST00000484275 PTPRMP28827 1452 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 TRAV17A0A0B4J275 112 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 GNG14A0A1W2PPG7 69 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 YPEL1O60688 119 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 PYYP10082 97 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 OR8B8Q15620 311 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 IQCJQ1A5X6 159 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 NDUFA11Q86Y39 141 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 COA4Q9NYJ1 87 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 CALML5Q9NZT1 146 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 CEP152O94986 1710 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 ABCA4P78363 2273 aa0.06□□□□□ -2.4
SCAF11-207ENST00000484275 SOGA1O94964 1423 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 BORCS7-ASMTA0A0B4J1R7 106 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 CXorf51AA0A1B0GTR3 108 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 A0A1B0GW64 132 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 C9JAW5 83 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 SMIM24O75264 130 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 RBP4P02753 201 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 PAEPP09466 180 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 SCTP09683 121 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 SLC25A26Q70HW3 274 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 VMO1Q7Z5L0 202 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 TMEM141Q96I45 108 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 PRR15LQ9BU68 103 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 BANF2Q9H503 90 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 BET1LQ9NYM9 111 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 HIVEP3Q5T1R4 2406 aa0.05□□□□□ -2.4
SCAF11-207ENST00000484275 KIAA0100Q14667 2235 aaKnown RBP0.04□□□□□ -2.4
SCAF11-207ENST00000484275 TCRBV3S1A0A5B6 114 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 F2Z2F3 143 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 ZNF670-ZNF695F2Z2N8 137 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 H0YJX3 145 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 DEGS1O15121 323 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 NBEAP1P0C6P0 100 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 HLA-DRB4P13762 266 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 CCDC153Q494R4 210 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 TMEM91Q6ZNR0 172 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 CYP2G1PQ6ZSU1 146 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 SNX29P2Q8IUI4 249 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 TCTE3Q8IZS6 198 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 ATP6V0E2Q8NHE4 81 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 DYNLRB2Q8TF09 96 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 BPESC1Q9GZL8 116 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 HLA-DRB4X5D2U9 266 aa0.04□□□□□ -2.4
SCAF11-207ENST00000484275 MYH9P35579 1960 aaKnown RBP0.04□□□□□ -2.4
SCAF11-207ENST00000484275 DOCK2Q92608 1830 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 MYO7AQ13402 2215 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 SSC5DA1L4H1 1573 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 ADGRB1O14514 1584 aa0.03□□□□□ -2.4
SCAF11-207ENST00000484275 MUC12Q9UKN1 5478 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms