RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 TCRAP04437 139 aa13.05□□□□□ -0.32
NDUFA3-213ENST00000484103 SUMO1P63165 101 aaKnown RBP13.05□□□□□ -0.32
NDUFA3-213ENST00000484103 LYPD6BQ8NI32 183 aa13.05□□□□□ -0.32
NDUFA3-213ENST00000484103 TXNDC17Q9BRA2 123 aa13.05□□□□□ -0.32
NDUFA3-213ENST00000484103 SCRT2Q9NQ03 307 aa13.05□□□□□ -0.32
NDUFA3-213ENST00000484103 C11orf21Q9P2W6 132 aa13.05□□□□□ -0.32
NDUFA3-213ENST00000484103 PSG8Q9UQ74 426 aa13.05□□□□□ -0.32
NDUFA3-213ENST00000484103 TRAV9-2A0A087WT02 112 aa13.04□□□□□ -0.32
NDUFA3-213ENST00000484103 GGTLC3B5MD39 225 aa13.04□□□□□ -0.32
NDUFA3-213ENST00000484103 EREGO14944 169 aa13.04□□□□□ -0.32
NDUFA3-213ENST00000484103 PPT1P50897 306 aa13.04□□□□□ -0.32
NDUFA3-213ENST00000484103 ZNF876PQ49A33 203 aa13.04□□□□□ -0.32
NDUFA3-213ENST00000484103 C5orf17Q8NAS9 161 aa13.04□□□□□ -0.32
NDUFA3-213ENST00000484103 KCNS1Q96KK3 526 aa13.04□□□□□ -0.32
NDUFA3-213ENST00000484103 ARL2-SNX15V9GYD0 113 aa13.04□□□□□ -0.32
NDUFA3-213ENST00000484103 A0A1B0GV50 99 aa13.03□□□□□ -0.32
NDUFA3-213ENST00000484103 A0A1W2PRE2 83 aa13.03□□□□□ -0.32
NDUFA3-213ENST00000484103 K7EQM0 130 aa13.03□□□□□ -0.32
NDUFA3-213ENST00000484103 EVI2AP22794 236 aa13.03□□□□□ -0.32
NDUFA3-213ENST00000484103 CCL20P78556 96 aa13.03□□□□□ -0.32
NDUFA3-213ENST00000484103 MSRB1Q9NZV6 116 aa13.03□□□□□ -0.32
NDUFA3-213ENST00000484103 TRAV34A0A0B4J273 112 aa13.02□□□□□ -0.33
NDUFA3-213ENST00000484103 FBLL1A6NHQ2 334 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-213ENST00000484103 TEX46H3BTG2 121 aa13.02□□□□□ -0.33
NDUFA3-213ENST00000484103 CRYGDP07320 174 aa13.02□□□□□ -0.33
NDUFA3-213ENST00000484103 UBE2G2P60604 165 aa13.02□□□□□ -0.33
NDUFA3-213ENST00000484103 LINC00479Q96M42 142 aa13.02□□□□□ -0.33
NDUFA3-213ENST00000484103 FAM74A7A6NL05 159 aa13.01□□□□□ -0.33
NDUFA3-213ENST00000484103 GATA1P15976 413 aaPredicted RBP13.01□□□□□ -0.33
NDUFA3-213ENST00000484103 FLI1Q01543 452 aaPredicted RBP13.01□□□□□ -0.33
NDUFA3-213ENST00000484103 NFE4Q86UQ8 179 aa13.01□□□□□ -0.33
NDUFA3-213ENST00000484103 Q8N1X5 172 aa13.01□□□□□ -0.33
NDUFA3-213ENST00000484103 EPDR1Q9UM22 224 aa13.01□□□□□ -0.33
NDUFA3-213ENST00000484103 IGLV2-11P01706 119 aa13□□□□□ -0.33
NDUFA3-213ENST00000484103 SMUG1Q53HV7 270 aa13□□□□□ -0.33
NDUFA3-213ENST00000484103 ARL6IP6Q8N6S5 226 aa13□□□□□ -0.33
NDUFA3-213ENST00000484103 CYB561D1Q8N8Q1 229 aa13□□□□□ -0.33
NDUFA3-213ENST00000484103 SLC25A29Q8N8R3 303 aa13□□□□□ -0.33
NDUFA3-213ENST00000484103 A0A087WTM6 91 aa12.99□□□□□ -0.33
NDUFA3-213ENST00000484103 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
NDUFA3-213ENST00000484103 PGPEP1LA6NFU8 196 aa12.99□□□□□ -0.33
NDUFA3-213ENST00000484103 CFAP126Q5VTH2 177 aa12.99□□□□□ -0.33
NDUFA3-213ENST00000484103 Q9HAA7 133 aa12.99□□□□□ -0.33
NDUFA3-213ENST00000484103 MANBALQ9NQG1 85 aa12.99□□□□□ -0.33
NDUFA3-213ENST00000484103 PFN1P07737 140 aaKnown RBP12.98□□□□□ -0.33
NDUFA3-213ENST00000484103 OR10J3Q5JRS4 329 aa12.98□□□□□ -0.33
NDUFA3-213ENST00000484103 ZNF506Q5JVG8 444 aa12.98□□□□□ -0.33
NDUFA3-213ENST00000484103 NKX6-2Q9C056 277 aaPredicted RBP12.98□□□□□ -0.33
NDUFA3-213ENST00000484103 RS1O15537 224 aa12.97□□□□□ -0.33
NDUFA3-213ENST00000484103 PAGE4O60829 102 aa12.97□□□□□ -0.33
NDUFA3-213ENST00000484103 IGHV3-30P01768 117 aa12.97□□□□□ -0.33
NDUFA3-213ENST00000484103 IGHV3-33P01772 117 aa12.97□□□□□ -0.33
NDUFA3-213ENST00000484103 IGHV3-30-3P0DP02 117 aa12.97□□□□□ -0.33
NDUFA3-213ENST00000484103 IGHV3-30-5P0DP03 117 aa12.97□□□□□ -0.33
NDUFA3-213ENST00000484103 PRADC1Q9BSG0 188 aa12.97□□□□□ -0.33
NDUFA3-213ENST00000484103 PGPEP1Q9NXJ5 209 aa12.97□□□□□ -0.33
NDUFA3-213ENST00000484103 GNG13Q9P2W3 67 aa12.97□□□□□ -0.33
NDUFA3-213ENST00000484103 IGHV3-38A0A0C4DH36 116 aa12.96□□□□□ -0.33
NDUFA3-213ENST00000484103 PSCAO43653 123 aa12.96□□□□□ -0.33
NDUFA3-213ENST00000484103 S100A4P26447 101 aaKnown RBP12.96□□□□□ -0.33
NDUFA3-213ENST00000484103 CLLU1Q5K131 121 aa12.96□□□□□ -0.33
NDUFA3-213ENST00000484103 C9orf85Q96MD7 179 aa12.96□□□□□ -0.33
NDUFA3-213ENST00000484103 IFNA1P01562 189 aa12.95□□□□□ -0.34
NDUFA3-213ENST00000484103 BCL2P10415 239 aa12.95□□□□□ -0.34
NDUFA3-213ENST00000484103 RNASE3P12724 160 aaKnown RBP12.95□□□□□ -0.34
NDUFA3-213ENST00000484103 HAMPP81172 84 aa12.95□□□□□ -0.34
NDUFA3-213ENST00000484103 RHOHQ15669 191 aa12.95□□□□□ -0.34
NDUFA3-213ENST00000484103 TCEAL7Q9BRU2 100 aa12.95□□□□□ -0.34
NDUFA3-213ENST00000484103 TRAV8-6A0A0B4J262 113 aa12.94□□□□□ -0.34
NDUFA3-213ENST00000484103 TAGLN2P37802 199 aaKnown RBP12.94□□□□□ -0.34
NDUFA3-213ENST00000484103 KRTAP10-1P60331 282 aa12.94□□□□□ -0.34
NDUFA3-213ENST00000484103 CST9LP1Q5W188 147 aa12.94□□□□□ -0.34
NDUFA3-213ENST00000484103 SH2D6Q7Z4S9 175 aa12.94□□□□□ -0.34
NDUFA3-213ENST00000484103 IGKV3D-20A0A0C4DH25 116 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 GAGE12JA6NER3 117 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 M0R036 132 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 PEX7O00628 323 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 RAB14P61106 215 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 GAGE1Q13065 139 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 GAGE4Q13068 117 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 GAGE5Q13069 117 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 GAGE13Q4V321 117 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 SAPCD1Q5SSQ6 148 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 C10orf126Q8N4M7 172 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 JPT2Q9H910 190 aa12.93□□□□□ -0.34
NDUFA3-213ENST00000484103 ASIPP42127 132 aa12.92□□□□□ -0.34
NDUFA3-213ENST00000484103 Q6ZSN1 163 aa12.92□□□□□ -0.34
NDUFA3-213ENST00000484103 Q86TA4 180 aa12.92□□□□□ -0.34
NDUFA3-213ENST00000484103 Q8N3U1 123 aa12.92□□□□□ -0.34
NDUFA3-213ENST00000484103 HIST1H2BAQ96A08 127 aa12.92□□□□□ -0.34
NDUFA3-213ENST00000484103 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
NDUFA3-213ENST00000484103 VAX2Q9UIW0 290 aa12.92□□□□□ -0.34
NDUFA3-213ENST00000484103 TRBV6-4A0A1B0GX49 114 aa12.91□□□□□ -0.34
NDUFA3-213ENST00000484103 GRIFINA4D1Z8 144 aa12.91□□□□□ -0.34
NDUFA3-213ENST00000484103 EPM2AB3EWF7 344 aa12.91□□□□□ -0.34
NDUFA3-213ENST00000484103 H3BVH4 76 aa12.91□□□□□ -0.34
NDUFA3-213ENST00000484103 MEF2BQ02080 365 aaPredicted RBP12.91□□□□□ -0.34
NDUFA3-213ENST00000484103 CDPF1Q6NVV7 123 aa12.91□□□□□ -0.34
NDUFA3-213ENST00000484103 ATP6V0E2Q8NHE4 81 aa12.91□□□□□ -0.34
NDUFA3-213ENST00000484103 TMSB15BA0A087X1C1 80 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms