RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SNAI2O43623 268 aa10.18□□□□□ -0.78
SMAD9-204ENST00000483941 MT-ND6P03923 174 aa10.18□□□□□ -0.78
SMAD9-204ENST00000483941 HBBP68871 147 aa10.18□□□□□ -0.78
SMAD9-204ENST00000483941 ZNF415Q09FC8 603 aa10.18□□□□□ -0.78
SMAD9-204ENST00000483941 LYZL1Q6UWQ5 148 aa10.18□□□□□ -0.78
SMAD9-204ENST00000483941 SYT8Q8NBV8 401 aa10.18□□□□□ -0.78
SMAD9-204ENST00000483941 YPEL4Q96NS1 127 aa10.18□□□□□ -0.78
SMAD9-204ENST00000483941 CNFNQ9BYD5 112 aa10.18□□□□□ -0.78
SMAD9-204ENST00000483941 TP53TG3Q9ULZ0 132 aa10.18□□□□□ -0.78
SMAD9-204ENST00000483941 TGIF2-C20orf24A0A0A6YYL0 155 aa10.17□□□□□ -0.78
SMAD9-204ENST00000483941 GIG44P09565 113 aaPredicted RBP10.17□□□□□ -0.78
SMAD9-204ENST00000483941 ARMS2P0C7Q2 107 aa10.17□□□□□ -0.78
SMAD9-204ENST00000483941 HTN1P15515 57 aa10.17□□□□□ -0.78
SMAD9-204ENST00000483941 RAB5AP20339 215 aa10.17□□□□□ -0.78
SMAD9-204ENST00000483941 SPANXN1Q5VSR9 72 aa10.17□□□□□ -0.78
SMAD9-204ENST00000483941 Q6ZWC4 215 aa10.17□□□□□ -0.78
SMAD9-204ENST00000483941 C1orf158Q8N1D5 194 aa10.17□□□□□ -0.78
SMAD9-204ENST00000483941 SPXQ9BT56 116 aa10.17□□□□□ -0.78
SMAD9-204ENST00000483941 TENM2Q9NT68 2774 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 IGHV3-16A0A0C4DH30 117 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 H3BVH4 76 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 GNRH2O43555 120 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 TWIST1Q15672 202 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 RRN3P1Q2M238 152 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 PIK3CD-AS1Q5SR53 167 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 ZNF705AQ6ZN79 300 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-204ENST00000483941 Q6ZQT7 251 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 ZFP82Q8N141 532 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-204ENST00000483941 CSNK1G2-AS1Q8NCQ2 148 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 TMEM263Q8WUH6 116 aaKnown RBP10.16□□□□□ -0.78
SMAD9-204ENST00000483941 C16orf74Q96GX8 76 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 NDUFAF3Q9BU61 184 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 GNB1LQ9BYB4 327 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 SCRT2Q9NQ03 307 aa10.16□□□□□ -0.78
SMAD9-204ENST00000483941 IGHV4-4A0A075B6R2 117 aa10.15□□□□□ -0.78
SMAD9-204ENST00000483941 IGHV3OR16-12A0A075B7B8 117 aa10.15□□□□□ -0.78
SMAD9-204ENST00000483941 HLA-DQA1P01909 254 aa10.15□□□□□ -0.78
SMAD9-204ENST00000483941 TRGC1P0CF51 173 aa10.15□□□□□ -0.78
SMAD9-204ENST00000483941 RBMY1A1P0DJD3 496 aaKnown RBP10.15□□□□□ -0.78
SMAD9-204ENST00000483941 RBMY1CP0DJD4 496 aa10.15□□□□□ -0.78
SMAD9-204ENST00000483941 RPS10P46783 165 aaKnown RBP10.15□□□□□ -0.78
SMAD9-204ENST00000483941 RBMY1FQ15415 496 aaKnown RBP10.15□□□□□ -0.78
SMAD9-204ENST00000483941 MRPL54Q6P161 138 aaKnown RBP10.15□□□□□ -0.78
SMAD9-204ENST00000483941 PTH2Q96A98 100 aa10.15□□□□□ -0.78
SMAD9-204ENST00000483941 RCHY1Q96PM5 261 aa10.15□□□□□ -0.78
SMAD9-204ENST00000483941 U3KQK5 164 aa10.15□□□□□ -0.78
SMAD9-204ENST00000483941 SNURFLB1AK76 121 aa10.14□□□□□ -0.79
SMAD9-204ENST00000483941 C3orf84H3BNL1 204 aa10.14□□□□□ -0.79
SMAD9-204ENST00000483941 SPINK4O60575 86 aa10.14□□□□□ -0.79
SMAD9-204ENST00000483941 RNASE3P12724 160 aaKnown RBP10.14□□□□□ -0.79
SMAD9-204ENST00000483941 RAB4BP61018 213 aa10.14□□□□□ -0.79
SMAD9-204ENST00000483941 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
SMAD9-204ENST00000483941 C9orf85Q96MD7 179 aa10.14□□□□□ -0.79
SMAD9-204ENST00000483941 TIMM8BQ9Y5J9 83 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-204ENST00000483941 A0A1B0GXF2 115 aa10.13□□□□□ -0.79
SMAD9-204ENST00000483941 NTF3P20783 257 aa10.13□□□□□ -0.79
SMAD9-204ENST00000483941 CAMPP49913 170 aa10.13□□□□□ -0.79
SMAD9-204ENST00000483941 TP53TG1Q9Y2A0 90 aa10.13□□□□□ -0.79
SMAD9-204ENST00000483941 TRAPPC1Q9Y5R8 145 aa10.13□□□□□ -0.79
SMAD9-204ENST00000483941 M0R2P5 195 aa10.12□□□□□ -0.79
SMAD9-204ENST00000483941 SMIM17P0DL12 118 aa10.12□□□□□ -0.79
SMAD9-204ENST00000483941 RNF183Q96D59 192 aa10.12□□□□□ -0.79
SMAD9-204ENST00000483941 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
SMAD9-204ENST00000483941 STARD9Q9P2P6 4700 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 M0R381 172 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 SPRY2O43597 315 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 NXPH4O95158 308 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 FRMD6-AS1P0C7T7 363 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 NHLRC4P0CG21 123 aaPredicted RBP10.11□□□□□ -0.79
SMAD9-204ENST00000483941 MIFP14174 115 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 LGALS9BQ3B8N2 356 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 GATD1Q8NB37 220 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 OR10AG1Q8NH19 301 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 RNASE8Q8TDE3 154 aaKnown RBP10.11□□□□□ -0.79
SMAD9-204ENST00000483941 FRZBQ92765 325 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 AP1S3Q96PC3 154 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 TMEM191AQ9H0A3 160 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 GSN-AS1Q9NRJ2 163 aa10.11□□□□□ -0.79
SMAD9-204ENST00000483941 C1orf196B1AJZ1 125 aa10.1□□□□□ -0.79
SMAD9-204ENST00000483941 APCSP02743 223 aa10.1□□□□□ -0.79
SMAD9-204ENST00000483941 DAZ2Q13117 558 aaKnown RBP10.1□□□□□ -0.79
SMAD9-204ENST00000483941 ZNF876PQ49A33 203 aa10.1□□□□□ -0.79
SMAD9-204ENST00000483941 TMEM136Q6ZRR5 245 aa10.1□□□□□ -0.79
SMAD9-204ENST00000483941 C11orf72Q8NBR9 251 aa10.1□□□□□ -0.79
SMAD9-204ENST00000483941 HYDINQ4G0P3 5121 aa10.1□□□□□ -0.79
SMAD9-204ENST00000483941 CSMD3Q7Z407 3707 aa10.09□□□□□ -0.79
SMAD9-204ENST00000483941 A8MWV9 139 aa10.09□□□□□ -0.79
SMAD9-204ENST00000483941 SSTP61278 116 aa10.09□□□□□ -0.79
SMAD9-204ENST00000483941 FABP9Q0Z7S8 132 aa10.09□□□□□ -0.79
SMAD9-204ENST00000483941 DEFB135Q30KP9 77 aa10.09□□□□□ -0.79
SMAD9-204ENST00000483941 OR11H2Q8NH07 326 aa10.09□□□□□ -0.79
SMAD9-204ENST00000483941 MRPL18Q9H0U6 180 aaKnown RBP10.09□□□□□ -0.79
SMAD9-204ENST00000483941 CIDEAO60543 219 aa10.08□□□□□ -0.8
SMAD9-204ENST00000483941 RAB5BP61020 215 aa10.08□□□□□ -0.8
SMAD9-204ENST00000483941 DMRTA1Q5VZB9 504 aa10.08□□□□□ -0.8
SMAD9-204ENST00000483941 RASL10AQ92737 203 aa10.08□□□□□ -0.8
SMAD9-204ENST00000483941 OVOL2Q9BRP0 275 aa10.08□□□□□ -0.8
SMAD9-204ENST00000483941 DPH3P1Q9H4G8 78 aa10.08□□□□□ -0.8
SMAD9-204ENST00000483941 MUC21A0A0G2JKD1 596 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms