RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 HELZP42694 1942 aaKnown RBP2.2□□□□□ -2.06
PTCD3-214ENST00000483925 BCORL1Q5H9F3 1711 aa2.2□□□□□ -2.06
PTCD3-214ENST00000483925 ZFC3H1O60293 1989 aaKnown RBP2.19□□□□□ -2.06
PTCD3-214ENST00000483925 KIAA1549LQ6ZVL6 1849 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 MYH13Q9UKX3 1938 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 NSD3Q9BZ95 1437 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 IGLV3-32A0A0A0MS00 114 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 J3QRE1 110 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 IGKCP01834 107 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 IGKV4-1P06312 121 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 C9orf116Q5BN46 136 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-214ENST00000483925 C5orf38Q86SI9 138 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 DSCR8Q96T75 97 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 ATG5Q9H1Y0 275 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 TMEM106BQ9NUM4 274 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 C22orf24Q9Y442 160 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 AP4S1Q9Y587 144 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 LRP5O75197 1615 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 IFT140Q96RY7 1462 aa2.19□□□□□ -2.06
PTCD3-214ENST00000483925 TROQ12816 1431 aaPredicted RBP2.18□□□□□ -2.06
PTCD3-214ENST00000483925 CXorf51AA0A1B0GTR3 108 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 UBE2L5PA0A1B0GUS4 154 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 JMJD7-PLA2G4BH0Y9G9 81 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 MPC2O95563 127 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 PPYP01298 95 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 PRB4P10163 310 aaPredicted RBP2.18□□□□□ -2.06
PTCD3-214ENST00000483925 UBE2G1P62253 170 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 UBE2L3P68036 154 aaKnown RBP2.18□□□□□ -2.06
PTCD3-214ENST00000483925 DCDP81605 110 aaKnown RBP2.18□□□□□ -2.06
PTCD3-214ENST00000483925 INSL4Q14641 139 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 IQCJQ1A5X6 159 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 S100A7L2Q5SY68 101 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 CSAG1Q6PB30 78 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 Q9H521 79 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 MED9Q9NWA0 146 aa2.18□□□□□ -2.06
PTCD3-214ENST00000483925 TRBV10-3A0A0K0K1G6 114 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 NUPR2A6NF83 97 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 H3BQ15 152 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 SSSCA1O60232 199 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 IGHV3-30P01768 117 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 LINC00032P0C843 101 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 IGHV3-30-5P0DP03 117 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 BRD3OSQ6XYD6 125 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 SBSPONQ8IVN8 264 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 C4orf33Q8N1A6 199 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 MRPL36Q9P0J6 103 aaKnown RBP2.17□□□□□ -2.06
PTCD3-214ENST00000483925 TMEM14CQ9P0S9 112 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 SNURFQ9Y675 71 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 RAPGEF2Q9Y4G8 1499 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 LTBP2Q14767 1821 aa2.17□□□□□ -2.06
PTCD3-214ENST00000483925 CPSF1Q10570 1443 aaKnown RBP2.17□□□□□ -2.06
PTCD3-214ENST00000483925 ZFHX2Q9C0A1 2572 aaPredicted RBP2.16□□□□□ -2.06
PTCD3-214ENST00000483925 PTPRMP28827 1452 aa2.16□□□□□ -2.06
PTCD3-214ENST00000483925 TRGV2A0A075B6R0 118 aa2.16□□□□□ -2.06
PTCD3-214ENST00000483925 MRPS14O60783 128 aaKnown RBP2.16□□□□□ -2.06
PTCD3-214ENST00000483925 RBM3P98179 157 aaKnown RBP2.16□□□□□ -2.06
PTCD3-214ENST00000483925 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
PTCD3-214ENST00000483925 Q6ZRN7 208 aaPredicted RBP2.16□□□□□ -2.06
PTCD3-214ENST00000483925 DPY30Q9C005 99 aa2.16□□□□□ -2.06
PTCD3-214ENST00000483925 V9GYS6 101 aa2.16□□□□□ -2.06
PTCD3-214ENST00000483925 SCN3AQ9NY46 2000 aa2.15□□□□□ -2.06
PTCD3-214ENST00000483925 NCKAP5O14513 1909 aa2.15□□□□□ -2.06
PTCD3-214ENST00000483925 AKAP11Q9UKA4 1901 aa2.15□□□□□ -2.06
PTCD3-214ENST00000483925 M0R2N4 97 aa2.15□□□□□ -2.07
PTCD3-214ENST00000483925 INE1O15225 51 aa2.15□□□□□ -2.07
PTCD3-214ENST00000483925 PDE6GP18545 87 aa2.15□□□□□ -2.07
PTCD3-214ENST00000483925 COMMD6Q7Z4G1 85 aa2.15□□□□□ -2.07
PTCD3-214ENST00000483925 LIMD2Q9BT23 127 aa2.15□□□□□ -2.07
PTCD3-214ENST00000483925 DPH3P1Q9H4G8 78 aa2.15□□□□□ -2.07
PTCD3-214ENST00000483925 MRPL35Q9NZE8 188 aaKnown RBP2.15□□□□□ -2.07
PTCD3-214ENST00000483925 MYH9P35579 1960 aaKnown RBP2.15□□□□□ -2.07
PTCD3-214ENST00000483925 C10orf71Q711Q0 1435 aa2.15□□□□□ -2.07
PTCD3-214ENST00000483925 HEATR5BQ9P2D3 2071 aa2.14□□□□□ -2.07
PTCD3-214ENST00000483925 TEX14Q8IWB6 1497 aa2.14□□□□□ -2.07
PTCD3-214ENST00000483925 FREM3P0C091 2139 aa2.14□□□□□ -2.07
PTCD3-214ENST00000483925 DNAL4O96015 105 aa2.14□□□□□ -2.07
PTCD3-214ENST00000483925 UBA52P62987 128 aaKnown RBP2.14□□□□□ -2.07
PTCD3-214ENST00000483925 LINC00322Q6ZN03 302 aaPredicted RBP2.14□□□□□ -2.07
PTCD3-214ENST00000483925 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
PTCD3-214ENST00000483925 FYCO1Q9BQS8 1478 aa2.14□□□□□ -2.07
PTCD3-214ENST00000483925 KDM6BO15054 1643 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 SDK2Q58EX2 2172 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 ARHGAP5Q13017 1502 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 TRAV13-2A0A0B4J235 113 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 TRAV12-3A0A0B4J271 114 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 IFI27L1Q96BM0 104 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 ODF3Q96PU9 254 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 WFDC10AQ9H1F0 79 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 SPHKAPQ2M3C7 1700 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 MUC4Q99102 2169 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 ADGRL2O95490 1459 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 CASZ1Q86V15 1759 aa2.13□□□□□ -2.07
PTCD3-214ENST00000483925 IGKV3-7A0A075B6H7 116 aa2.12□□□□□ -2.07
PTCD3-214ENST00000483925 IGLV3-1P01715 115 aa2.12□□□□□ -2.07
PTCD3-214ENST00000483925 CCKP06307 115 aa2.12□□□□□ -2.07
PTCD3-214ENST00000483925 CCL8P80075 99 aa2.12□□□□□ -2.07
PTCD3-214ENST00000483925 SPATA45Q537H7 98 aa2.12□□□□□ -2.07
PTCD3-214ENST00000483925 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
PTCD3-214ENST00000483925 NUMA1Q14980 2115 aa2.12□□□□□ -2.07
PTCD3-214ENST00000483925 ADGRB2O60241 1585 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms