RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 NDUFC2O95298 119 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 IGHV3-13P01766 116 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 ZNF415Q09FC8 603 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 ALKBH6Q3KRA9 238 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 TMEM155Q4W5P6 130 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 HES3Q5TGS1 186 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 Q6ZT83 130 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 C5orf38Q86SI9 138 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 EXOC3-AS1Q8N2X6 119 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 POM121L12Q8N7R1 296 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 TMEM263Q8WUH6 116 aaKnown RBP4.3□□□□□ -1.72
SGIP1-210ENST00000483060 METTL26Q96S19 204 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
SGIP1-210ENST00000483060 PTPRBP23467 1997 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 IGHV5-10-1A0A0J9YXX1 117 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 FAM236AA0A1B0GUQ0 79 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 FAM236BA0A1B0GV22 79 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 F5H768 121 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 MRPS12O15235 138 aaKnown RBP4.29□□□□□ -1.72
SGIP1-210ENST00000483060 TIMM17BO60830 172 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 IGHV1-69P01742 117 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 IGHV3-9P01782 118 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 IGKV1-16P04430 117 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 ADORA2A-AS1P86434 159 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 Q0VFX4 171 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 Q1RN00 199 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 S100A7L2Q5SY68 101 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 HIST2H2BCQ6DN03 193 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 DEFB118Q96PH6 123 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 TTTY13Q9BZ97 58 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 DPH3P1Q9H4G8 78 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 HCFC1P51610 2035 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 USF3Q68DE3 2245 aa4.29□□□□□ -1.72
SGIP1-210ENST00000483060 PRRC2BQ5JSZ5 2229 aaKnown RBP4.28□□□□□ -1.72
SGIP1-210ENST00000483060 I3L2K1 104 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 J3QQQ9 107 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 LST1O00453 97 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 IGLV1-44P01699 117 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 IGLV2-23P01705 113 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 HOXD3P31249 432 aaPredicted RBP4.28□□□□□ -1.72
SGIP1-210ENST00000483060 DSCR9P59020 149 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 FAM222AQ5U5X8 452 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 SPANXN1Q5VSR9 72 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 ZNF826PQ6ZT77 177 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 FAM216BQ8N7L0 139 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 ZNF491Q8N8L2 437 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 DPH3Q96FX2 82 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 CHCHD5Q9BSY4 110 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 EDA2RQ9HAV5 297 aa4.28□□□□□ -1.72
SGIP1-210ENST00000483060 DYSFO75923 2080 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 A0A087WW49 117 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 TMSB15BA0A087X1C1 80 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 IGHV4-28A0A0C4DH34 117 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 TEX49A0A1B0GTD5 131 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 M0R3E3 92 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 VCYO14598 125 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 PSMB8P28062 276 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 HIST1H4AP62805 103 aaKnown RBP4.27□□□□□ -1.73
SGIP1-210ENST00000483060 GUSBP11Q6P575 273 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 Q6ZQT7 251 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 DEFB132Q7Z7B7 95 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 SERP2Q8N6R1 65 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 KIR2DL5BQ8NHK3 375 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 PRORYQ9H606 182 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 LAMTOR3Q9UHA4 124 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
SGIP1-210ENST00000483060 TET2Q6N021 2002 aaPredicted RBP4.26□□□□□ -1.73
SGIP1-210ENST00000483060 SRCAPQ6ZRS2 3230 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 TRAV13-1A0A0B4J241 112 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 SMKR1H3BMG3 65 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 H7C423 109 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 K7ENP7 123 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 CDX4O14627 284 aaPredicted RBP4.26□□□□□ -1.73
SGIP1-210ENST00000483060 IGKV1-17P01599 117 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 CCL5P13501 91 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 FXYD7P58549 80 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 RPL18AQ02543 176 aaKnown RBP4.26□□□□□ -1.73
SGIP1-210ENST00000483060 RHOHQ15669 191 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 ZNF876PQ49A33 203 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 FAM53AQ6NSI3 398 aaPredicted RBP4.26□□□□□ -1.73
SGIP1-210ENST00000483060 TRPT1Q86TN4 253 aaKnown RBP4.26□□□□□ -1.73
SGIP1-210ENST00000483060 SLC25A45Q8N413 288 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 ZNRF1Q8ND25 227 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 DCTN5Q9BTE1 182 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 AGPAT4-IT1Q9H0P7 198 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 ICOSQ9Y6W8 199 aa4.26□□□□□ -1.73
SGIP1-210ENST00000483060 IGLV3-9A0A075B6K5 115 aa4.25□□□□□ -1.73
SGIP1-210ENST00000483060 TMEM223A0PJW6 202 aa4.25□□□□□ -1.73
SGIP1-210ENST00000483060 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
SGIP1-210ENST00000483060 IGHV1-2P23083 117 aa4.25□□□□□ -1.73
SGIP1-210ENST00000483060 ATP5EP56381 51 aaPredicted RBP4.25□□□□□ -1.73
SGIP1-210ENST00000483060 CIRBPQ14011 172 aaKnown RBP4.25□□□□□ -1.73
SGIP1-210ENST00000483060 ATP5EP2Q5VTU8 51 aa4.25□□□□□ -1.73
SGIP1-210ENST00000483060 DUX4L9Q6RFH8 374 aaPredicted RBP4.25□□□□□ -1.73
SGIP1-210ENST00000483060 LINC00477Q96M19 166 aa4.25□□□□□ -1.73
SGIP1-210ENST00000483060 GAFA1Q96PS6 74 aa4.25□□□□□ -1.73
SGIP1-210ENST00000483060 RPP25Q9BUL9 199 aaKnown RBP4.25□□□□□ -1.73
SGIP1-210ENST00000483060 TTTY12Q9BZ98 90 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms